PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000371237	[[57394882, 57395231], [57397482, 57397551], [57399007, 57399161], [57406521, 57406685], [57409368, 57409497], [57411493, 57411734], [57415227, 57415425], [57417720, 57417853], [57420358, 57420500], [57422441, 57422583], [57425692, 57425849], [57431529, 57431688]]	[[57395076, 57395231], [57397482, 57397551], [57399007, 57399161], [57406521, 57406685], [57409368, 57409497], [57411493, 57411734], [57415227, 57415425], [57417720, 57417853], [57420358, 57420500], [57422441, 57422583], [57425692, 57425849], [57431529, 57431621]]
ENST00000543257	[[57394884, 57395231], [57397482, 57397551], [57399007, 57399161], [57406521, 57406685], [57409368, 57409497], [57411493, 57411734], [57415227, 57415425], [57417720, 57417853], [57420358, 57420500], [57422441, 57422583], [57425692, 57425849], [57429444, 57429666], [57431529, 57431810]]	[[57395076, 57395231], [57397482, 57397551], [57399007, 57399161], [57406521, 57406685], [57409368, 57409497], [57411493, 57411734], [57415227, 57415425], [57417720, 57417853], [57420358, 57420500], [57422441, 57422583], [57425692, 57425785]]
ENST00000535057	[[57395025, 57395231], [57397482, 57397551], [57399007, 57399161], [57406521, 57406685], [57409368, 57409497], [57411493, 57411734], [57415227, 57415425], [57417720, 57417853], [57420358, 57420500], [57422441, 57422583], [57425201, 57425330], [57425692, 57425849], [57431529, 57431730]]	[[57395076, 57395231], [57397482, 57397551], [57399007, 57399161], [57406521, 57406685], [57409368, 57409497], [57411493, 57411734], [57415227, 57415425], [57417720, 57417853], [57420358, 57420500], [57422441, 57422583], [57425201, 57425264]]
ENST00000465658	[[57397266, 57397551], [57399007, 57399054]]	None
ENST00000468990	[[57422527, 57422583], [57425201, 57425330], [57425692, 57425849], [57431529, 57431730]]	None
ENST00000494324	[[57425735, 57425849], [57429444, 57429666], [57431529, 57431813]]	None
NM_001278543	[[57394882, 57395231], [57397482, 57397551], [57399007, 57399161], [57406521, 57406685], [57409368, 57409497], [57411493, 57411734], [57415227, 57415425], [57417720, 57417853], [57420358, 57420500], [57422441, 57422583], [57425692, 57425849], [57429444, 57429666], [57431529, 57431813]]	[[57395076, 57395231], [57397482, 57397551], [57399007, 57399161], [57406521, 57406685], [57409368, 57409497], [57411493, 57411734], [57415227, 57415425], [57417720, 57417853], [57420358, 57420500], [57422441, 57422583], [57425692, 57425785]]
NM_001278544	[[57394882, 57395231], [57397482, 57397551], [57399007, 57399161], [57406521, 57406685], [57409368, 57409497], [57411493, 57411734], [57415227, 57415425], [57417720, 57417853], [57420358, 57420500], [57422441, 57422583], [57425201, 57425330], [57425692, 57425849], [57431529, 57431813]]	[[57395076, 57395231], [57397482, 57397551], [57399007, 57399161], [57406521, 57406685], [57409368, 57409497], [57411493, 57411734], [57415227, 57415425], [57417720, 57417853], [57420358, 57420500], [57422441, 57422583], [57425201, 57425264]]
NM_000066	[[57394882, 57395231], [57397482, 57397551], [57399007, 57399161], [57406521, 57406685], [57409368, 57409497], [57411493, 57411734], [57415227, 57415425], [57417720, 57417853], [57420358, 57420500], [57422441, 57422583], [57425692, 57425849], [57431529, 57431813]]	[[57395076, 57395231], [57397482, 57397551], [57399007, 57399161], [57406521, 57406685], [57409368, 57409497], [57411493, 57411734], [57415227, 57415425], [57417720, 57417853], [57420358, 57420500], [57422441, 57422583], [57425692, 57425849], [57431529, 57431621]]

Promoter

Chrom	Start	End	Description
chr1	57431679	57431696	CAGE_peak_1_at_C8B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I056574	56574800	56582386	2.5	[{'connected_gene': 'PLPP3', 'score': 554.69}, {'connected_gene': 'C8A', 'score': 8.33}, {'connected_gene': 'FYB2', 'score': 7.87}, {'connected_gene': 'C8B', 'score': 6.59}, {'connected_gene': 'PRKAA2', 'score': 4.96}, {'connected_gene': 'RPL23AP85', 'score': 0.44}, {'connected_gene': 'GC01P056539', 'score': 0.26}]
chr1	GH01I056907	56907863	56912072	1.17	[{'connected_gene': 'C8B', 'score': 21.73}, {'connected_gene': 'C8A', 'score': 19.25}, {'connected_gene': 'FYB2', 'score': 18.15}, {'connected_gene': 'GC01P056889', 'score': 0.34}, {'connected_gene': 'LOC105378745', 'score': 0.23}]
chr1	GH01I057033	57033309	57034842	0.66	[{'connected_gene': 'C8B', 'score': 8.68}, {'connected_gene': 'LOC105378748', 'score': 0.37}, {'connected_gene': 'LOC105378747', 'score': 0.12}]
chr1	GH01I056966	56966005	56966064	1.13	[{'connected_gene': 'C8B', 'score': 550.77}, {'connected_gene': 'LOC105378745', 'score': 0.77}]
chr1	GH01I056919	56919808	56919957	0.87	[{'connected_gene': 'C8B', 'score': 11.12}, {'connected_gene': 'GC01P056889', 'score': 0.29}, {'connected_gene': 'LOC105378745', 'score': 0.26}]
chr1	GH01I057279	57279420	57283946	1.18	[{'connected_gene': 'C8A', 'score': 4.02}, {'connected_gene': 'C8B', 'score': 3.63}, {'connected_gene': 'FYB2', 'score': 2.39}, {'connected_gene': 'GC01P057267', 'score': 0.39}, {'connected_gene': 'GC01P057293', 'score': 0.39}]
chr1	GH01I057006	57006755	57006879	0.22	[{'connected_gene': 'FYB2', 'score': 5.49}, {'connected_gene': 'C8A', 'score': 5.05}, {'connected_gene': 'C8B', 'score': 3.8}, {'connected_gene': 'GC01P057000', 'score': 0.44}, {'connected_gene': 'LOC105378748', 'score': 0.39}]