PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000361249	[[57320478, 57320651], [57333281, 57333375], [57340621, 57340766], [57341734, 57341882], [57347117, 57347307], [57349153, 57349354], [57351599, 57351840], [57372339, 57372465], [57373628, 57373786], [57378075, 57378298], [57383237, 57383894]]	[[57320574, 57320651], [57333281, 57333375], [57340621, 57340766], [57341734, 57341882], [57347117, 57347307], [57349153, 57349354], [57351599, 57351840], [57372339, 57372465], [57373628, 57373786], [57378075, 57378298], [57383237, 57383389]]
NM_000562	[[57320442, 57320651], [57333281, 57333375], [57340621, 57340766], [57341734, 57341882], [57347117, 57347307], [57349153, 57349354], [57351599, 57351840], [57372339, 57372465], [57373628, 57373786], [57378075, 57378298], [57383237, 57383894]]	[[57320574, 57320651], [57333281, 57333375], [57340621, 57340766], [57341734, 57341882], [57347117, 57347307], [57349153, 57349354], [57351599, 57351840], [57372339, 57372465], [57373628, 57373786], [57378075, 57378298], [57383237, 57383389]]

Promoter

Chrom	Start	End	Description
chr1	57320437	57320479	CAGE_peak_1_at_C8A_5end
chr1	57320495	57320514	CAGE_peak_2_at_C8A_5end
chr1	57320524	57320540	CAGE_peak_3_at_C8A_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I056574	56574800	56582386	2.5	[{'connected_gene': 'PLPP3', 'score': 554.69}, {'connected_gene': 'C8A', 'score': 8.33}, {'connected_gene': 'FYB2', 'score': 7.87}, {'connected_gene': 'C8B', 'score': 6.59}, {'connected_gene': 'PRKAA2', 'score': 4.96}, {'connected_gene': 'RPL23AP85', 'score': 0.44}, {'connected_gene': 'GC01P056539', 'score': 0.26}]
chr1	GH01I056907	56907863	56912072	1.17	[{'connected_gene': 'C8B', 'score': 21.73}, {'connected_gene': 'C8A', 'score': 19.25}, {'connected_gene': 'FYB2', 'score': 18.15}, {'connected_gene': 'GC01P056889', 'score': 0.34}, {'connected_gene': 'LOC105378745', 'score': 0.23}]
chr1	GH01I057279	57279420	57283946	1.18	[{'connected_gene': 'C8A', 'score': 4.02}, {'connected_gene': 'C8B', 'score': 3.63}, {'connected_gene': 'FYB2', 'score': 2.39}, {'connected_gene': 'GC01P057267', 'score': 0.39}, {'connected_gene': 'GC01P057293', 'score': 0.39}]
chr1	GH01I056831	56831748	56833627	1.2	[{'connected_gene': 'C8A', 'score': 10.96}, {'connected_gene': 'ENSG00000229913', 'score': 0.44}, {'connected_gene': 'GC01P056845', 'score': 0.39}]
chr1	GH01I056866	56866383	56867477	0.58	[{'connected_gene': 'C8A', 'score': 0.39}, {'connected_gene': 'GC01P056889', 'score': 0.34}]
chr1	GH01I056854	56854748	56854807	1.16	[{'connected_gene': 'C8A', 'score': 550.77}, {'connected_gene': 'GC01P056889', 'score': 0.29}]
chr1	GH01I057006	57006755	57006879	0.22	[{'connected_gene': 'FYB2', 'score': 5.49}, {'connected_gene': 'C8A', 'score': 5.05}, {'connected_gene': 'C8B', 'score': 3.8}, {'connected_gene': 'GC01P057000', 'score': 0.44}, {'connected_gene': 'LOC105378748', 'score': 0.39}]