PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000344941	[[16341418, 16342749], [16347278, 16347387], [16369826, 16369958], [16377347, 16377536], [16392614, 16392801], [16397513, 16397734], [16410634, 16410804], [16425494, 16425717], [16430258, 16430619]]	[[16342601, 16342749], [16347278, 16347387], [16369826, 16369958], [16377347, 16377536], [16392614, 16392801], [16397513, 16397734], [16410634, 16410804], [16425494, 16425717], [16430258, 16430619]]
NM_001170798	[[16341418, 16342749], [16347278, 16347387], [16369826, 16369958], [16377347, 16377536], [16392614, 16392801], [16397513, 16397734], [16410634, 16410804], [16425494, 16425717], [16430258, 16430619]]	[[16342601, 16342749], [16347278, 16347387], [16369826, 16369958], [16377347, 16377536], [16392614, 16392801], [16397513, 16397734], [16410634, 16410804], [16425494, 16425717], [16430258, 16430619]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I016353	16353801	16354600	0.51	[{'connected_gene': 'SLC15A5', 'score': 10.62}, {'connected_gene': 'MGST1', 'score': 0.44}, {'connected_gene': 'GC12P016380', 'score': 0.31}]
chr12	GH12I016282	16282167	16282232	0.2	[{'connected_gene': 'SLC15A5', 'score': 0.77}, {'connected_gene': 'LOC101928362', 'score': 0.39}, {'connected_gene': 'PIR41579', 'score': 0.29}]
chr12	GH12I016277	16277707	16277766	0.5	[{'connected_gene': 'SLC15A5', 'score': 550.77}, {'connected_gene': 'LOC101928362', 'score': 0.44}, {'connected_gene': 'PIR41579', 'score': 0.28}]
chr12	GH12I016299	16299547	16301050	0.31	[{'connected_gene': 'MGST1', 'score': 4.86}, {'connected_gene': 'PIR41579', 'score': 0.39}, {'connected_gene': 'SLC15A5', 'score': 0.34}, {'connected_gene': 'LOC101928362', 'score': 0.29}]
chr12	GH12I016280	16280727	16282028	0.6	[{'connected_gene': 'MGST1', 'score': 5.67}, {'connected_gene': 'SLC15A5', 'score': 0.77}, {'connected_gene': 'LOC101928362', 'score': 0.39}, {'connected_gene': 'PIR41579', 'score': 0.29}]
chr12	GH12I016176	16176006	16176336	0.22	[{'connected_gene': 'MGST1', 'score': 5.08}, {'connected_gene': 'SLC15A5', 'score': 1.45}, {'connected_gene': 'GC12M016137', 'score': 0.39}, {'connected_gene': 'GC12P016202', 'score': 0.31}]
chr12	GH12I016346	16346646	16353575	2.16	[{'connected_gene': 'MGST1', 'score': 574.19}, {'connected_gene': 'SLC15A5', 'score': 15.59}, {'connected_gene': 'GC12P016380', 'score': 0.29}]
chr12	GH12I016244	16244907	16245946	0.38	[{'connected_gene': 'PIR42572', 'score': 0.77}, {'connected_gene': 'GC12P016252', 'score': 0.44}, {'connected_gene': 'SLC15A5', 'score': 0.29}]