Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000423741 [[3751452, 3751628], [3756138, 3756190], [3774592, 3774669], [3789509, 3789638], [3800352, 3800490], [3802181, 3802224], [3815343, 3815470], [3816900, 3817001], [3826405, 3826457]] [[3751452, 3751628], [3756138, 3756190], [3774592, 3774669], [3789509, 3789638], [3800352, 3800490], [3802181, 3802224], [3815343, 3815470], [3816900, 3817001], [3826405, 3826457]]
ENST00000537457 [[3773535, 3773617], [3774592, 3774669], [3815343, 3815470], [3816638, 3816731], [3816900, 3817001], [3826405, 3826474], [3832648, 3832690], [3835997, 3836122]] None
ENST00000399143 [[3800168, 3800209], [3800352, 3800490], [3802181, 3802224], [3815343, 3815470], [3816900, 3817001]] [[3800168, 3800209], [3800352, 3800490], [3802181, 3802224], [3815343, 3815470], [3816900, 3817001]]
NM_001287444 [[3751181, 3751628], [3756138, 3756190], [3774592, 3774669], [3789509, 3789638], [3800352, 3800490], [3802181, 3802224], [3815343, 3815470], [3816900, 3817001], [3826405, 3826474], [3832648, 3832690], [3894743, 3895001]] [[3751341, 3751628], [3756138, 3756190], [3774592, 3774669], [3789509, 3789638], [3800352, 3800490], [3802181, 3802224], [3815343, 3815470], [3816900, 3817001], [3826405, 3826474], [3832648, 3832690], [3894743, 3894773]]
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr2 GH02I003702 3702915 3704819 0.81 [{'connected_gene': 'DCDC2C', 'score': 555.25}, {'connected_gene': 'LOC105373393', 'score': 550.77}, {'connected_gene': 'ALLC', 'score': 8.99}]
chr2 GH02I003712 3712114 3713696 0.52 [{'connected_gene': 'DCDC2C', 'score': 6.42}, {'connected_gene': 'LOC105373393', 'score': 0.44}, {'connected_gene': 'GC02M003908', 'score': 0.08}]
chr2 GH02I003758 3758949 3760123 0.2 [{'connected_gene': 'LOC105373393', 'score': 11.4}, {'connected_gene': 'DCDC2C', 'score': 11.4}, {'connected_gene': 'GC02M003908', 'score': 0.1}]
chr2 GH02I003780 3780601 3781000 0.75 [{'connected_gene': 'LOC105373393', 'score': 0.18}, {'connected_gene': 'DCDC2C', 'score': 0.18}, {'connected_gene': 'GC02M003908', 'score': 0.12}]
chr2 GH02I003728 3728001 3728200 0.49 [{'connected_gene': 'LOC105373393', 'score': 0.34}, {'connected_gene': 'DCDC2C', 'score': 0.34}, {'connected_gene': 'GC02M003908', 'score': 0.09}]
chr2 GH02I003838 3838479 3840072 0.2 [{'connected_gene': 'GC02M003908', 'score': 0.19}, {'connected_gene': 'LOC105373393', 'score': 0.12}, {'connected_gene': 'DCDC2C', 'score': 0.12}]

© 2018 bmi.sjtu.edu.cn. All rights reserved.
浙ICP备18030141号.