PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000366639	[[231664398, 231664572], [231665000, 231665105], [231672958, 231673073], [231678226, 231678357], [231696873, 231697001], [231700273, 231702270]]	[[231664556, 231664572], [231665000, 231665105], [231672958, 231673073], [231678226, 231678357], [231696873, 231697001], [231700273, 231700651]]
ENST00000413309	[[231664400, 231664572], [231665000, 231665105], [231672958, 231673073], [231678205, 231678357], [231696873, 231696975]]	[[231664556, 231664572], [231665000, 231665105], [231672958, 231673073], [231678205, 231678357], [231696873, 231696975]]
ENST00000602825	[[231664412, 231664572], [231665000, 231665105], [231672958, 231673073], [231678226, 231678357], [231690366, 231690440]]	None
ENST00000476913	[[231665008, 231665105], [231672958, 231673073], [231678226, 231678595]]	None
ENST00000475168	[[231669865, 231673073], [231678226, 231678357], [231696873, 231697001], [231699210, 231699375], [231700273, 231702270]]	None
NM_005999	[[231664398, 231664572], [231665000, 231665105], [231672958, 231673073], [231678226, 231678357], [231696873, 231697001], [231700273, 231702270]]	[[231664556, 231664572], [231665000, 231665105], [231672958, 231673073], [231678226, 231678357], [231696873, 231697001], [231700273, 231700651]]

Promoter

Chrom	Start	End	Description
chr1	231664390	231664479	CAGE_peak_1_at_TSNAX_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I231494	231494559	231494744	0.52	[{'connected_gene': 'TSNAX', 'score': 3.07}, {'connected_gene': 'DISC1', 'score': 2.3}, {'connected_gene': 'GC01M231493', 'score': 0.77}, {'connected_gene': 'SNRPD2P2', 'score': 0.37}]
chr1	GH01I231502	231502936	231503129	0.22	[{'connected_gene': 'TSNAX', 'score': 3.62}, {'connected_gene': 'DISC1', 'score': 2.53}, {'connected_gene': 'GC01M231493', 'score': 0.44}, {'connected_gene': 'GC01P231515', 'score': 0.39}]
chr1	GH01I231527	231527091	231531007	2.42	[{'connected_gene': 'TSNAX', 'score': 557.03}, {'connected_gene': 'TSNAX-DISC1', 'score': 550.77}, {'connected_gene': 'ENSG00000233461', 'score': 550.77}, {'connected_gene': 'C1orf131', 'score': 15.79}, {'connected_gene': 'COG2', 'score': 10.83}, {'connected_gene': 'DISC1', 'score': 6.11}, {'connected_gene': 'GNPAT', 'score': 5.53}, {'connected_gene': 'EXOC8', 'score': 4.66}, {'connected_gene': 'SPRTN', 'score': 1.98}, {'connected_gene': 'GC01P231515', 'score': 0.39}, {'connected_gene': 'GC01P231590', 'score': 0.21}, {'connected_gene': 'GC01P231591', 'score': 0.21}]
chr1	GH01I231599	231599691	231602307	0.82	[{'connected_gene': 'DISC1', 'score': 21.75}, {'connected_gene': 'TSNAX', 'score': 10.81}, {'connected_gene': 'ENSG00000233461', 'score': 10.81}, {'connected_gene': 'EGLN1', 'score': 10.21}, {'connected_gene': 'GC01P231590', 'score': 0.39}, {'connected_gene': 'GC01P231591', 'score': 0.39}, {'connected_gene': 'LINC00582', 'score': 0.39}, {'connected_gene': 'TSNAX-DISC1', 'score': 0.19}, {'connected_gene': 'GC01P231515', 'score': 0.17}]
chr1	GH01I231982	231982147	231982300	0.41	[{'connected_gene': 'DISC1', 'score': 2.31}, {'connected_gene': 'TSNAX', 'score': 1.18}, {'connected_gene': 'DISC1-IT1', 'score': 0.22}, {'connected_gene': 'LOC105373172', 'score': 0.21}, {'connected_gene': 'TSNAX-DISC1', 'score': 0.05}]
chr1	GH01I231724	231724800	231725600	1.19	[{'connected_gene': 'DISC1', 'score': 19.16}, {'connected_gene': 'TSNAX', 'score': 1.58}, {'connected_gene': 'GC01P231693', 'score': 0.29}, {'connected_gene': 'ENSG00000274121', 'score': 0.17}, {'connected_gene': 'TSNAX-DISC1', 'score': 0.08}]
chr1	GH01I231726	231726655	231726924	0.22	[{'connected_gene': 'DISC1', 'score': 12.66}, {'connected_gene': 'TSNAX', 'score': 1.51}, {'connected_gene': 'GC01P231693', 'score': 0.29}, {'connected_gene': 'ENSG00000274121', 'score': 0.17}, {'connected_gene': 'TSNAX-DISC1', 'score': 0.08}]
chr1	GH01I231585	231585002	231585315	0.39	[{'connected_gene': 'LINC00582', 'score': 11.71}, {'connected_gene': 'EGLN1', 'score': 11.33}, {'connected_gene': 'DISC1', 'score': 7.34}, {'connected_gene': 'TSNAX', 'score': 2.71}, {'connected_gene': 'GC01P231590', 'score': 0.44}, {'connected_gene': 'GC01P231591', 'score': 0.44}, {'connected_gene': 'TSNAX-DISC1', 'score': 0.22}, {'connected_gene': 'GC01P231515', 'score': 0.2}]
chr1	GH01I231583	231583938	231584719	0.85	[{'connected_gene': 'LINC00582', 'score': 11.71}, {'connected_gene': 'EGLN1', 'score': 11.33}, {'connected_gene': 'GC01P231590', 'score': 0.44}, {'connected_gene': 'GC01P231591', 'score': 0.44}, {'connected_gene': 'TSNAX-DISC1', 'score': 0.22}, {'connected_gene': 'TSNAX', 'score': 0.22}, {'connected_gene': 'GC01P231515', 'score': 0.2}]
chr1	GH01I231571	231571831	231572185	0.31	[{'connected_gene': 'GC01P231590', 'score': 0.37}, {'connected_gene': 'GC01P231591', 'score': 0.37}, {'connected_gene': 'TSNAX-DISC1', 'score': 0.26}, {'connected_gene': 'TSNAX', 'score': 0.26}, {'connected_gene': 'GC01P231515', 'score': 0.22}]