PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000368804	[[152078792, 152085554], [152086418, 152086556]]	[[152079860, 152085554], [152086418, 152086556]]
NM_007113	[[152078792, 152085554], [152086418, 152086587], [152087866, 152087930]]	[[152079860, 152085554], [152086418, 152086556]]

Promoter

Chrom	Start	End	Description
chr1	152087919	152087921	CAGE_peak_1_at_TCHH_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I152070	152070976	152071834	0.79	[{'connected_gene': 'S100A11', 'score': 12.48}, {'connected_gene': 'TCHH', 'score': 11.67}, {'connected_gene': 'ENSG00000226716', 'score': 11.64}, {'connected_gene': 'PUDPP2', 'score': 11.54}, {'connected_gene': 'FLG', 'score': 9.77}, {'connected_gene': 'SPTLC1P4', 'score': 0.44}, {'connected_gene': 'LOC101927949', 'score': 0.34}]
chr1	GH01I152143	152143715	152143898	0.34	[{'connected_gene': 'HRNR', 'score': 16.95}, {'connected_gene': 'ENSG00000226716', 'score': 12.27}, {'connected_gene': 'TCHH', 'score': 12.24}, {'connected_gene': 'PUDPP2', 'score': 12.16}, {'connected_gene': 'S100A11', 'score': 10.67}, {'connected_gene': 'TCHHL1', 'score': 10.3}, {'connected_gene': 'ENSG00000229021', 'score': 8.03}, {'connected_gene': 'LCE3A', 'score': 1.29}, {'connected_gene': 'RPTN', 'score': 0.37}]
chr1	GH01I152107	152107705	152112719	1.17	[{'connected_gene': 'POGZ', 'score': 49.52}, {'connected_gene': 'PI4KB', 'score': 49.33}, {'connected_gene': 'PIP5K1A', 'score': 47.75}, {'connected_gene': 'MRPL9', 'score': 37.77}, {'connected_gene': 'HRNR', 'score': 24.97}, {'connected_gene': 'LYSMD1', 'score': 23.52}, {'connected_gene': 'ZNF687', 'score': 21.53}, {'connected_gene': 'ENSG00000229021', 'score': 16.87}, {'connected_gene': 'RN7SL444P', 'score': 9.76}, {'connected_gene': 'TCHH', 'score': 5.79}, {'connected_gene': 'PIR33217', 'score': 0.77}, {'connected_gene': 'TCHHL1', 'score': 0.34}]
chr1	GH01I152115	152115434	152115493	0.5	[{'connected_gene': 'PIR33217', 'score': 550.77}, {'connected_gene': 'TCHH', 'score': 550.77}, {'connected_gene': 'GC01P152119', 'score': 0.77}]
chr1	GH01I152229	152229005	152229114	0.31	[{'connected_gene': 'ENSG00000236427', 'score': 11.21}, {'connected_gene': 'FLG', 'score': 9.97}, {'connected_gene': 'TCHH', 'score': 9.79}, {'connected_gene': 'FLG2', 'score': 9.62}, {'connected_gene': 'HRNR', 'score': 0.77}, {'connected_gene': 'FLG-AS1', 'score': 0.21}, {'connected_gene': 'PIR46233', 'score': 0.19}]