PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000336395	[[35605366, 35605835], [35605980, 35606102], [35606233, 35606282], [35606833, 35606980], [35607323, 35607406], [35607578, 35607669], [35607924, 35608008], [35608156, 35608246], [35608391, 35608506], [35608858, 35610029]]	[[35605616, 35605835], [35605980, 35606102], [35606233, 35606282], [35606833, 35606980], [35607323, 35607406], [35607578, 35607669], [35607924, 35608008], [35608156, 35608246], [35608391, 35608506], [35608858, 35609739]]
ENST00000498522	[[35605487, 35605835], [35605980, 35606102], [35606233, 35606282], [35606833, 35606980], [35607578, 35607669], [35607924, 35608008], [35608156, 35608246], [35608391, 35608506], [35608858, 35610038]]	None
ENST00000467424	[[35606968, 35607406], [35607578, 35607669], [35607924, 35608008], [35608156, 35608279]]	None
ENST00000463897	[[35607221, 35607669], [35607924, 35608008], [35608156, 35608224]]	None
ENST00000480077	[[35607662, 35608008], [35608156, 35608246], [35608391, 35608432]]	None
NM_001318230	[[35605280, 35605835], [35605980, 35606102], [35606233, 35606282], [35606833, 35606980], [35607578, 35607669], [35607924, 35608008], [35608156, 35608246], [35608391, 35608506], [35608858, 35610038]]	[[35606840, 35606980], [35607578, 35607669], [35607924, 35608008], [35608156, 35608246], [35608391, 35608506], [35608858, 35609739]]
NM_006285	[[35605280, 35605835], [35605980, 35606102], [35606233, 35606282], [35606833, 35606980], [35607323, 35607406], [35607578, 35607669], [35607924, 35608008], [35608156, 35608246], [35608391, 35608506], [35608858, 35610038]]	[[35605616, 35605835], [35605980, 35606102], [35606233, 35606282], [35606833, 35606980], [35607323, 35607406], [35607578, 35607669], [35607924, 35608008], [35608156, 35608246], [35608391, 35608506], [35608858, 35609739]]

Promoter

Chrom	Start	End	Description
chr9	35605231	35605272	CAGE_peak_1_at_TESK1_5end
chr9	35605274	35605341	CAGE_peak_2_at_TESK1_5end
chr9	35608873	35608877	CAGE_peak_4_at_TESK1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I035608	35608280	35610641	0.38	[{'connected_gene': 'MIR4667', 'score': 550.77}, {'connected_gene': 'CCDC107', 'score': 12.15}, {'connected_gene': 'RN7SL22P', 'score': 12.11}, {'connected_gene': 'ARHGEF39', 'score': 12.1}, {'connected_gene': 'SIT1', 'score': 11.61}, {'connected_gene': 'FAM166B', 'score': 11.03}, {'connected_gene': 'CA9', 'score': 10.84}, {'connected_gene': 'TLN1', 'score': 10.72}, {'connected_gene': 'CREB3', 'score': 10.72}, {'connected_gene': 'GBA2', 'score': 10.71}, {'connected_gene': 'CD72', 'score': 7.19}, {'connected_gene': 'TESK1', 'score': 0.77}, {'connected_gene': 'ENSG00000231393', 'score': 0.29}]
chr9	GH09I035602	35602843	35606431	2.39	[{'connected_gene': 'GC09M035603', 'score': 550.77}, {'connected_gene': 'TESK1', 'score': 550.77}, {'connected_gene': 'CD72', 'score': 23.9}, {'connected_gene': 'ENSG00000231393', 'score': 12.44}, {'connected_gene': 'LOC101926948', 'score': 12.43}, {'connected_gene': 'CCDC107', 'score': 11.24}, {'connected_gene': 'RN7SL22P', 'score': 11.21}, {'connected_gene': 'ARHGEF39', 'score': 11.2}, {'connected_gene': 'VCP', 'score': 10.81}, {'connected_gene': 'RUSC2', 'score': 9.26}, {'connected_gene': 'TMEM8B', 'score': 8.91}, {'connected_gene': 'SPAG8', 'score': 8.21}, {'connected_gene': 'FAM221B', 'score': 6.85}, {'connected_gene': 'ENSG00000227388', 'score': 4.68}, {'connected_gene': 'GBA2', 'score': 2.06}, {'connected_gene': 'RECK', 'score': 1.34}, {'connected_gene': 'RPS29P17', 'score': 0.39}]