PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000477333	[[73629113, 73629296], [73635998, 73636799]]	None
ENST00000539231	[[73629113, 73629296], [73635998, 73636872], [73637961, 73638021], [73649845, 73650129]]	[[73636010, 73636872], [73637961, 73638021], [73649845, 73650024]]
ENST00000377687	[[73632929, 73633726], [73635998, 73636872], [73637961, 73638021], [73649845, 73651676]]	[[73633465, 73633726], [73635998, 73636872], [73637961, 73638021], [73649845, 73650024]]
ENST00000476859	[[73634716, 73634801], [73635998, 73636680]]	None
ENST00000464404	[[73649152, 73649211], [73649845, 73649916]]	None
NM_001286818	[[73629113, 73629296], [73635998, 73636872], [73637961, 73638021], [73649845, 73651680]]	[[73636010, 73636872], [73637961, 73638021], [73649845, 73650024]]
NM_001730	[[73632929, 73633726], [73635998, 73636872], [73637961, 73638021], [73649845, 73651680]]	[[73633465, 73633726], [73635998, 73636872], [73637961, 73638021], [73649845, 73650024]]

Promoter

Chrom	Start	End	Description
chr13	73629091	73629094	CAGE_peak_26_at_KLF5_5end
chr13	73629107	73629148	CAGE_peak_8_at_KLF5_5end
chr13	73629158	73629165	CAGE_peak_21_at_KLF5_5end
chr13	73632897	73632923	CAGE_peak_12_at_KLF5_5end
chr13	73633131	73633149	CAGE_peak_1_at_KLF5_5end
chr13	73636252	73636307	CAGE_peak_2_at_KLF5_5end
chr13	73636310	73636330	CAGE_peak_5_at_KLF5_5end
chr13	73636334	73636351	CAGE_peak_6_at_KLF5_5end
chr13	73636409	73636420	CAGE_peak_10_at_KLF5_5end
chr13	73636440	73636451	CAGE_peak_9_at_KLF5_5end
chr13	73636516	73636532	CAGE_peak_3_at_KLF5_5end
chr13	73636621	73636647	CAGE_peak_4_at_KLF5_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I073039	73039073	73042394	0.96	[{'connected_gene': 'BORA', 'score': 9.81}, {'connected_gene': 'PIBF1', 'score': 5.43}, {'connected_gene': 'PSMD10P3', 'score': 0.77}, {'connected_gene': 'KLF5', 'score': 0.39}]
chr13	GH13I073078	73078148	73082775	0.74	[{'connected_gene': 'KLF5', 'score': 5.48}, {'connected_gene': 'FABP5P1', 'score': 0.34}]
chr13	GH13I073077	73077983	73078132	0.51	[{'connected_gene': 'KLF5', 'score': 5.17}, {'connected_gene': 'FABP5P1', 'score': 0.34}]
chr13	GH13I073054	73054138	73077711	2.43	[{'connected_gene': 'KLF5', 'score': 557.7}, {'connected_gene': 'DIS3', 'score': 23.54}, {'connected_gene': 'BORA', 'score': 20.45}, {'connected_gene': 'RNU4-10P', 'score': 10.72}, {'connected_gene': 'FABP5P1', 'score': 0.28}]
chr13	GH13I073464	73464216	73467786	1.19	[{'connected_gene': 'KLF5', 'score': 7.4}, {'connected_gene': 'GC13M073437', 'score': 0.31}, {'connected_gene': 'LOC105377816', 'score': 0.21}, {'connected_gene': 'LINC00393', 'score': 0.08}]
chr13	GH13I073617	73617970	73619740	0.49	[{'connected_gene': 'KLF5', 'score': 9.52}, {'connected_gene': 'LOC105370256', 'score': 0.31}, {'connected_gene': 'LINC00393', 'score': 0.26}]
chr13	GH13I073597	73597656	73599447	0.6	[{'connected_gene': 'KLF5', 'score': 11.11}, {'connected_gene': 'LOC105370256', 'score': 0.44}, {'connected_gene': 'LINC00393', 'score': 0.21}]
chr13	GH13I073582	73582938	73583817	0.2	[{'connected_gene': 'KLF5', 'score': 8.77}, {'connected_gene': 'LOC105370256', 'score': 0.44}, {'connected_gene': 'LINC00392', 'score': 0.37}, {'connected_gene': 'LINC00393', 'score': 0.18}]
chr13	GH13I073368	73368061	73369655	0.95	[{'connected_gene': 'KLF5', 'score': 2.09}, {'connected_gene': 'GC13P073400', 'score': 0.29}, {'connected_gene': 'GC13P073401', 'score': 0.29}, {'connected_gene': 'RNY1P8', 'score': 0.11}]
chr13	GH13I073427	73427423	73430759	1.06	[{'connected_gene': 'KLF5', 'score': 5.62}, {'connected_gene': 'GC13P073437', 'score': 0.44}, {'connected_gene': 'MARK2P12', 'score': 0.34}, {'connected_gene': 'LINC00393', 'score': 0.07}]
chr13	GH13I073419	73419013	73423596	0.8	[{'connected_gene': 'KLF5', 'score': 5.51}, {'connected_gene': 'MARK2P12', 'score': 0.39}, {'connected_gene': 'GC13P073437', 'score': 0.37}, {'connected_gene': 'LINC00393', 'score': 0.07}]
chr13	GH13I073100	73100801	73101000	0.61	[{'connected_gene': 'FABP5P1', 'score': 550.77}, {'connected_gene': 'KLF5', 'score': 0.25}]
chr13	GH13I073093	73093696	73093968	0.2	[{'connected_gene': 'FABP5P1', 'score': 0.44}, {'connected_gene': 'KLF5', 'score': 0.28}]
chr13	GH13I073095	73095285	73097341	0.82	[{'connected_gene': 'FABP5P1', 'score': 0.77}, {'connected_gene': 'KLF5', 'score': 0.26}]
chr13	GH13I073044	73044599	73045668	0.4	[{'connected_gene': 'PSMD10P3', 'score': 0.44}, {'connected_gene': 'KLF5', 'score': 0.44}]
chr13	GH13I073035	73035987	73036863	0.31	[{'connected_gene': 'PSMD10P3', 'score': 550.77}, {'connected_gene': 'PIBF1', 'score': 4.86}, {'connected_gene': 'KLF5', 'score': 0.37}]
chr13	GH13I073088	73088593	73091788	1.36	[{'connected_gene': 'RNU6-66P', 'score': 13.11}, {'connected_gene': 'FABP5P1', 'score': 0.39}, {'connected_gene': 'KLF5', 'score': 0.28}]
chr13	GH13I073087	73087641	73088097	0.2	[{'connected_gene': 'RNU6-66P', 'score': 13.08}, {'connected_gene': 'FABP5P1', 'score': 0.39}, {'connected_gene': 'KLF5', 'score': 0.29}]
chr13	GH13I073092	73092283	73093648	0.31	[{'connected_gene': 'RNU6-66P', 'score': 13.11}, {'connected_gene': 'FABP5P1', 'score': 0.44}, {'connected_gene': 'KLF5', 'score': 0.28}]