Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000372806 [[43595114, 43595244], [43600718, 43600799], [43607083, 43607212], [43610469, 43610584], [43615772, 43615937], [43623730, 43623898], [43625809, 43625947], [43629032, 43629161], [43629807, 43629994], [43653613, 43653771], [43703658, 43708600]] [[43595209, 43595244], [43600718, 43600799], [43607083, 43607212], [43610469, 43610584], [43615772, 43615937], [43623730, 43623898], [43625809, 43625947], [43629032, 43629161], [43629807, 43629994], [43653613, 43653771], [43703658, 43703817]]
ENST00000396731 [[43595141, 43595244], [43600718, 43600799], [43607083, 43607212], [43610469, 43610584], [43615772, 43615937], [43623730, 43623898], [43625809, 43625947], [43629032, 43629161], [43629807, 43629994], [43653613, 43653771], [43681726, 43681810]] [[43595209, 43595244], [43600718, 43600799], [43607083, 43607212], [43610469, 43610584], [43615772, 43615937], [43623730, 43623898], [43625809, 43625947], [43629032, 43629161], [43629807, 43629994], [43653613, 43653771], [43681726, 43681810]]
ENST00000372801 [[43595162, 43595244], [43600718, 43600799], [43607083, 43607212], [43610469, 43610584], [43615772, 43615937], [43623730, 43623898], [43625809, 43625947], [43629032, 43629161], [43629807, 43629994], [43653613, 43653771], [43681726, 43681821], [43703658, 43704249]] [[43595209, 43595244], [43600718, 43600799], [43607083, 43607212], [43610469, 43610584], [43615772, 43615937], [43623730, 43623898], [43625809, 43625947], [43629032, 43629161], [43629807, 43629994], [43653613, 43653771], [43681726, 43681810]]
ENST00000499879 [[43595166, 43595244], [43600718, 43600799], [43607083, 43607212], [43610469, 43610584], [43623730, 43623898], [43625809, 43625947], [43629032, 43629161], [43629807, 43629994], [43653613, 43653771], [43703658, 43707692]] [[43595209, 43595244], [43600718, 43600799], [43607083, 43607212], [43610469, 43610584], [43623730, 43623898], [43625809, 43625947], [43629032, 43629161], [43629807, 43629994], [43653613, 43653771], [43703658, 43703817]]
ENST00000488618 [[43595155, 43595244], [43600718, 43601561]] None
ENST00000480745 [[43595179, 43595244], [43600718, 43600799], [43601847, 43602074], [43602869, 43603045]] None
ENST00000487587 [[43595193, 43595244], [43600718, 43600799], [43601941, 43602074], [43602740, 43604329]] None
ENST00000474717 [[43599182, 43599246], [43600718, 43600799], [43607083, 43607212], [43610469, 43610584], [43615772, 43615937], [43623730, 43623898]] None
NM_006282 [[43595114, 43595244], [43600718, 43600799], [43607083, 43607212], [43610469, 43610584], [43615772, 43615937], [43623730, 43623898], [43625809, 43625947], [43629032, 43629161], [43629807, 43629994], [43653613, 43653771], [43703658, 43708618]] [[43595209, 43595244], [43600718, 43600799], [43607083, 43607212], [43610469, 43610584], [43615772, 43615937], [43623730, 43623898], [43625809, 43625947], [43629032, 43629161], [43629807, 43629994], [43653613, 43653771], [43703658, 43703817]]
Promoter
Chrom Start End Description
chr20 43595119 43595220 CAGE_peak_1_at_STK4_5end
chr20 43599007 43599020 CAGE_peak_2_at_STK4_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr3 GH03I049508 49508915 49509611 0.65 [{'connected_gene': 'BSN', 'score': 11.38}, {'connected_gene': 'RNA5SP130', 'score': 11.29}, {'connected_gene': 'DAG1', 'score': 11.29}, {'connected_gene': 'BSN-AS1', 'score': 11.25}, {'connected_gene': 'BSN-AS2', 'score': 11.15}, {'connected_gene': 'LAMB2', 'score': 10.18}, {'connected_gene': 'MST1', 'score': 3.72}, {'connected_gene': 'PIR41851', 'score': 0.34}, {'connected_gene': 'GC03P049421', 'score': 0.17}]
chr20 GH20I044909 44909300 44912189 2.33 [{'connected_gene': 'PABPC1L', 'score': 561.43}, {'connected_gene': 'YWHAB', 'score': 33.71}, {'connected_gene': 'ENSG00000271984', 'score': 29.77}, {'connected_gene': 'ZSWIM1', 'score': 19.38}, {'connected_gene': 'SPATA25', 'score': 14.33}, {'connected_gene': 'TOMM34', 'score': 10.65}, {'connected_gene': 'STK4-AS1', 'score': 10.63}, {'connected_gene': 'STK4', 'score': 10.63}, {'connected_gene': 'DBNDD2', 'score': 1.57}, {'connected_gene': 'PIR52220', 'score': 0.34}]
chr20 GH20I044941 44941328 44941451 0.4 [{'connected_gene': 'PABPC1L', 'score': 11.42}, {'connected_gene': 'TP53TG5', 'score': 2.62}, {'connected_gene': 'RBPJL', 'score': 1.76}, {'connected_gene': 'STK4', 'score': 1.6}, {'connected_gene': 'PIR52220', 'score': 0.44}, {'connected_gene': 'TOMM34', 'score': 0.37}]
chr20 GH20I045024 45024090 45027186 0.38 [{'connected_gene': 'PABPC1L', 'score': 10.44}, {'connected_gene': 'WFDC5', 'score': 10.09}, {'connected_gene': 'STK4', 'score': 8.8}, {'connected_gene': 'TOMM34', 'score': 5.78}, {'connected_gene': 'ENSG00000252021', 'score': 0.34}, {'connected_gene': 'PIR48188', 'score': 0.23}]
chr3 GH03I048896 48896701 48899874 2.03 [{'connected_gene': 'SLC25A20', 'score': 550.77}, {'connected_gene': 'WDR6', 'score': 51.58}, {'connected_gene': 'ARIH2', 'score': 13.0}, {'connected_gene': 'ARIH2OS', 'score': 13.0}, {'connected_gene': 'QARS', 'score': 10.06}, {'connected_gene': 'MST1', 'score': 6.95}, {'connected_gene': 'IP6K2', 'score': 3.93}, {'connected_gene': 'PRKAR2A', 'score': 0.23}]
chr3 GH03I049338 49338697 49353402 2.66 [{'connected_gene': 'USP4', 'score': 565.03}, {'connected_gene': 'AMT', 'score': 71.69}, {'connected_gene': 'QRICH1', 'score': 41.08}, {'connected_gene': 'ENSG00000235236', 'score': 38.82}, {'connected_gene': 'RBM6', 'score': 32.91}, {'connected_gene': 'ATRIP', 'score': 29.45}, {'connected_gene': 'RBM5', 'score': 29.3}, {'connected_gene': 'WDR6', 'score': 28.82}, {'connected_gene': 'IP6K2', 'score': 27.4}, {'connected_gene': 'ENSG00000230454', 'score': 23.04}, {'connected_gene': 'DALRD3', 'score': 17.18}, {'connected_gene': 'RHOA', 'score': 16.73}, {'connected_gene': 'NICN1', 'score': 15.66}, {'connected_gene': 'SEMA3F-AS1', 'score': 14.61}, {'connected_gene': 'USP19', 'score': 14.04}, {'connected_gene': 'TCTA', 'score': 12.02}, {'connected_gene': 'FAM212A', 'score': 11.68}, {'connected_gene': 'APEH', 'score': 11.53}, {'connected_gene': 'ENSG00000223343', 'score': 11.11}, {'connected_gene': 'RHOA-IT1', 'score': 11.06}, {'connected_gene': 'NAT6', 'score': 11.0}, {'connected_gene': 'C3orf62', 'score': 10.9}, {'connected_gene': 'IMPDH2', 'score': 10.5}, {'connected_gene': 'NDUFAF3', 'score': 10.5}, {'connected_gene': 'MIR191', 'score': 10.5}, {'connected_gene': 'MIR425', 'score': 10.5}, {'connected_gene': 'P4HTM', 'score': 10.45}, {'connected_gene': 'QARS', 'score': 9.64}, {'connected_gene': 'CDHR4', 'score': 5.64}, {'connected_gene': 'ARIH2', 'score': 3.95}, {'connected_gene': 'MST1', 'score': 3.73}, {'connected_gene': 'IP6K1', 'score': 3.52}, {'connected_gene': 'UBA7', 'score': 2.45}, {'connected_gene': 'GC03M049358', 'score': 0.39}]
chr3 GH03I049397 49397588 49397717 0.9 [{'connected_gene': 'MST1', 'score': 3.69}, {'connected_gene': 'TCTA', 'score': 0.39}, {'connected_gene': 'RHOA', 'score': 0.37}, {'connected_gene': 'RHOA-IT1', 'score': 0.29}]
chr3 GH03I050309 50309421 50310333 0.82 [{'connected_gene': 'MST1', 'score': 6.15}, {'connected_gene': 'HYAL1', 'score': 5.69}, {'connected_gene': 'HYAL3', 'score': 0.39}]
chr20 GH20I044965 44965174 44972677 2.58 [{'connected_gene': 'STK4', 'score': 575.1}, {'connected_gene': 'PCIF1', 'score': 24.39}, {'connected_gene': 'SYS1', 'score': 14.48}, {'connected_gene': 'ENSG00000271984', 'score': 12.46}, {'connected_gene': 'PABPC1L', 'score': 10.77}, {'connected_gene': 'DNTTIP1', 'score': 10.34}, {'connected_gene': 'OSER1', 'score': 9.75}, {'connected_gene': 'WFDC5', 'score': 7.35}, {'connected_gene': 'TOMM34', 'score': 6.2}, {'connected_gene': 'SERINC3', 'score': 4.71}, {'connected_gene': 'YWHAB', 'score': 1.84}, {'connected_gene': 'ADA', 'score': 1.18}, {'connected_gene': 'STK4-AS1', 'score': 0.77}, {'connected_gene': 'ENSG00000252021', 'score': 0.28}]
chr3 GH03I049686 49686242 49690453 2.25 [{'connected_gene': 'MST1', 'score': 559.59}, {'connected_gene': 'PIR39139', 'score': 550.77}, {'connected_gene': 'RNF123', 'score': 550.77}, {'connected_gene': 'AMT', 'score': 19.19}, {'connected_gene': 'RBM6', 'score': 15.08}, {'connected_gene': 'QRICH1', 'score': 13.66}, {'connected_gene': 'CDHR4', 'score': 12.75}, {'connected_gene': 'AMIGO3', 'score': 12.64}, {'connected_gene': 'GMPPB', 'score': 12.63}, {'connected_gene': 'IMPDH2', 'score': 12.17}, {'connected_gene': 'USP19', 'score': 11.55}, {'connected_gene': 'PHF5EP', 'score': 11.1}, {'connected_gene': 'IP6K1', 'score': 11.08}, {'connected_gene': 'TMEM115', 'score': 10.21}, {'connected_gene': 'APEH', 'score': 7.85}, {'connected_gene': 'PIR43040', 'score': 0.77}, {'connected_gene': 'GC03P049421', 'score': 0.06}]
chr20 GH20I044976 44976838 44982110 1.21 [{'connected_gene': 'STK4', 'score': 8.71}, {'connected_gene': 'KCNS1', 'score': 4.73}, {'connected_gene': 'ENSG00000252021', 'score': 0.34}]
chr20 GH20I045014 45014084 45016797 1.03 [{'connected_gene': 'STK4', 'score': 20.21}, {'connected_gene': 'STK4-AS1', 'score': 11.97}, {'connected_gene': 'TOMM34', 'score': 11.96}, {'connected_gene': 'PABPC1L', 'score': 10.78}, {'connected_gene': 'KCNS1', 'score': 4.67}, {'connected_gene': 'ENSG00000252021', 'score': 0.39}, {'connected_gene': 'PIR48188', 'score': 0.21}]
chr20 GH20I045010 45010005 45012053 0.85 [{'connected_gene': 'STK4', 'score': 20.64}, {'connected_gene': 'STK4-AS1', 'score': 11.94}, {'connected_gene': 'TOMM34', 'score': 11.91}, {'connected_gene': 'PABPC1L', 'score': 10.79}, {'connected_gene': 'ENSG00000252021', 'score': 0.44}, {'connected_gene': 'PIR48188', 'score': 0.21}]
chr20 GH20I045012 45012092 45013689 0.63 [{'connected_gene': 'STK4', 'score': 18.81}, {'connected_gene': 'STK4-AS1', 'score': 11.93}, {'connected_gene': 'TOMM34', 'score': 11.91}, {'connected_gene': 'PABPC1L', 'score': 10.79}, {'connected_gene': 'ENSG00000252021', 'score': 0.44}, {'connected_gene': 'PIR48188', 'score': 0.21}]
chr20 GH20I044994 44994355 45003855 0.31 [{'connected_gene': 'STK4', 'score': 21.68}, {'connected_gene': 'STK4-AS1', 'score': 12.99}, {'connected_gene': 'TOMM34', 'score': 12.98}, {'connected_gene': 'JPH2', 'score': 5.35}, {'connected_gene': 'KCNS1', 'score': 4.66}, {'connected_gene': 'ENSG00000252021', 'score': 0.44}]
chr20 GH20I044989 44989647 44994200 1.09 [{'connected_gene': 'STK4', 'score': 21.64}, {'connected_gene': 'STK4-AS1', 'score': 13.01}, {'connected_gene': 'TOMM34', 'score': 12.99}, {'connected_gene': 'ENSG00000252021', 'score': 0.39}]
chr20 GH20I045017 45017371 45018197 1.02 [{'connected_gene': 'STK4', 'score': 8.47}, {'connected_gene': 'ENSG00000252021', 'score': 0.39}, {'connected_gene': 'PIR48188', 'score': 0.22}]
chr20 GH20I044972 44972908 44974010 0.82 [{'connected_gene': 'STK4', 'score': 8.86}, {'connected_gene': 'ENSG00000252021', 'score': 0.29}]
chr20 GH20I044982 44982797 44983829 0.62 [{'connected_gene': 'STK4', 'score': 8.71}, {'connected_gene': 'ENSG00000252021', 'score': 0.34}]
chr3 GH03I049703 49703528 49703717 0.67 [{'connected_gene': 'RNF123', 'score': 0.39}, {'connected_gene': 'MST1', 'score': 0.39}, {'connected_gene': 'AMIGO3', 'score': 0.37}, {'connected_gene': 'GC03P049421', 'score': 0.06}]
chr20 GH20I044608 44608490 44612180 1.72 [{'connected_gene': 'KCNK15', 'score': 12.11}, {'connected_gene': 'PKIG', 'score': 11.08}, {'connected_gene': 'SYS1', 'score': 9.78}, {'connected_gene': 'TTPAL', 'score': 5.19}, {'connected_gene': 'ENSG00000132832', 'score': 4.4}, {'connected_gene': 'ADA', 'score': 3.07}, {'connected_gene': 'OSER1', 'score': 1.93}, {'connected_gene': 'STK4', 'score': 1.36}, {'connected_gene': 'PIR61280', 'score': 0.39}, {'connected_gene': 'GC20M044554', 'score': 0.28}]
chr3 GH03I049016 49016871 49023650 2.31 [{'connected_gene': 'DALRD3', 'score': 560.51}, {'connected_gene': 'GC03M049024', 'score': 550.77}, {'connected_gene': 'NDUFAF3', 'score': 550.77}, {'connected_gene': 'MIR425', 'score': 550.77}, {'connected_gene': 'MIR191', 'score': 550.77}, {'connected_gene': 'WDR6', 'score': 70.97}, {'connected_gene': 'ENSG00000235236', 'score': 54.16}, {'connected_gene': 'NICN1', 'score': 50.24}, {'connected_gene': 'ENSG00000223343', 'score': 41.28}, {'connected_gene': 'P4HTM', 'score': 40.21}, {'connected_gene': 'AMT', 'score': 39.47}, {'connected_gene': 'FCF1P2', 'score': 36.49}, {'connected_gene': 'QRICH1', 'score': 35.58}, {'connected_gene': 'RBM6', 'score': 33.32}, {'connected_gene': 'ZNF589', 'score': 31.51}, {'connected_gene': 'ATRIP', 'score': 27.01}, {'connected_gene': 'CCDC71', 'score': 20.54}, {'connected_gene': 'IP6K2', 'score': 13.52}, {'connected_gene': 'USP19', 'score': 12.5}, {'connected_gene': 'NME6', 'score': 11.81}, {'connected_gene': 'MRPS18AP1', 'score': 11.62}, {'connected_gene': 'ARIH2', 'score': 11.39}, {'connected_gene': 'QARS', 'score': 11.24}, {'connected_gene': 'ARIH2OS', 'score': 11.2}, {'connected_gene': 'TMEM89', 'score': 11.08}, {'connected_gene': 'ENSG00000271973', 'score': 10.17}, {'connected_gene': 'TRAIP', 'score': 9.95}, {'connected_gene': 'IP6K1', 'score': 9.66}, {'connected_gene': 'MST1', 'score': 4.47}]
chr3 GH03I048714 48714858 48718038 2.18 [{'connected_gene': 'IP6K2', 'score': 550.34}, {'connected_gene': 'WDR6', 'score': 35.33}, {'connected_gene': 'NCKIPSD', 'score': 12.61}, {'connected_gene': 'DHX30', 'score': 11.11}, {'connected_gene': 'NICN1', 'score': 10.93}, {'connected_gene': 'PRKAR2A', 'score': 10.54}, {'connected_gene': 'PRKAR2A-AS1', 'score': 10.54}, {'connected_gene': 'ENSG00000235236', 'score': 9.78}, {'connected_gene': 'QARS', 'score': 9.22}, {'connected_gene': 'MST1', 'score': 4.4}]
chr3 GH03I049409 49409349 49418264 2.46 [{'connected_gene': 'RHOA', 'score': 550.77}, {'connected_gene': 'TCTA', 'score': 550.77}, {'connected_gene': 'AMT', 'score': 45.15}, {'connected_gene': 'CCDC71', 'score': 22.23}, {'connected_gene': 'WDR6', 'score': 15.54}, {'connected_gene': 'SEMA3F-AS1', 'score': 15.38}, {'connected_gene': 'QRICH1', 'score': 12.91}, {'connected_gene': 'FAM212A', 'score': 11.87}, {'connected_gene': 'RBM5', 'score': 11.82}, {'connected_gene': 'RNA5SP130', 'score': 11.64}, {'connected_gene': 'DAG1', 'score': 11.64}, {'connected_gene': 'TMEM115', 'score': 11.6}, {'connected_gene': 'USP4', 'score': 11.39}, {'connected_gene': 'KLHDC8B', 'score': 10.49}, {'connected_gene': 'C3orf62', 'score': 10.38}, {'connected_gene': 'LAMB2', 'score': 9.92}, {'connected_gene': 'APEH', 'score': 7.28}, {'connected_gene': 'NICN1', 'score': 6.0}, {'connected_gene': 'MST1', 'score': 3.69}, {'connected_gene': 'GC03P049421', 'score': 0.44}, {'connected_gene': 'ENSG00000283189', 'score': 0.37}]
chr3 GH03I049711 49711511 49711981 0.2 [{'connected_gene': 'AMIGO3', 'score': 0.44}, {'connected_gene': 'RNF123', 'score': 0.34}, {'connected_gene': 'MST1', 'score': 0.34}, {'connected_gene': 'GC03P049421', 'score': 0.06}]
chr3 GH03I049719 49718751 49720317 1.76 [{'connected_gene': 'AMIGO3', 'score': 550.77}, {'connected_gene': 'FAM212A', 'score': 23.43}, {'connected_gene': 'GMPPB', 'score': 0.77}, {'connected_gene': 'RNF123', 'score': 0.29}, {'connected_gene': 'MST1', 'score': 0.29}, {'connected_gene': 'GC03P049421', 'score': 0.06}]
chr3 GH03I049718 49718535 49718617 0.38 [{'connected_gene': 'AMIGO3', 'score': 550.77}, {'connected_gene': 'GMPPB', 'score': 0.44}, {'connected_gene': 'RNF123', 'score': 0.31}, {'connected_gene': 'MST1', 'score': 0.31}, {'connected_gene': 'GC03P049421', 'score': 0.06}]
chr20 GH20I045078 45078046 45082256 0.62 [{'connected_gene': 'KCNS1', 'score': 12.12}, {'connected_gene': 'PABPC1L', 'score': 10.97}, {'connected_gene': 'WFDC5', 'score': 10.92}, {'connected_gene': 'STK4', 'score': 8.12}, {'connected_gene': 'PIR51876', 'score': 0.77}, {'connected_gene': 'GC20M045100', 'score': 0.37}]
chr20 GH20I045068 45068911 45072572 1.36 [{'connected_gene': 'KCNS1', 'score': 15.75}, {'connected_gene': 'ZNF335', 'score': 15.48}, {'connected_gene': 'PCIF1', 'score': 14.33}, {'connected_gene': 'ENSG00000271984', 'score': 12.46}, {'connected_gene': 'WFDC5', 'score': 10.98}, {'connected_gene': 'DNTTIP1', 'score': 10.34}, {'connected_gene': 'OSER1', 'score': 9.75}, {'connected_gene': 'STK4', 'score': 8.88}, {'connected_gene': 'PIR48188', 'score': 0.44}, {'connected_gene': 'ENSG00000252021', 'score': 0.2}]
chr20 GH20I045043 45043700 45044908 1.09 [{'connected_gene': 'KCNS1', 'score': 11.51}, {'connected_gene': 'WFDC5', 'score': 10.98}, {'connected_gene': 'STK4', 'score': 7.54}, {'connected_gene': 'WFDC12', 'score': 5.31}, {'connected_gene': 'PIR48188', 'score': 0.29}, {'connected_gene': 'ENSG00000252021', 'score': 0.28}]
chr20 GH20I045049 45049565 45050499 0.89 [{'connected_gene': 'KCNS1', 'score': 11.47}, {'connected_gene': 'WFDC5', 'score': 10.29}, {'connected_gene': 'STK4', 'score': 8.09}, {'connected_gene': 'PIR48188', 'score': 0.31}, {'connected_gene': 'ENSG00000252021', 'score': 0.25}]
chr20 GH20I045059 45059045 45062535 1.1 [{'connected_gene': 'KCNS1', 'score': 15.57}, {'connected_gene': 'WFDC5', 'score': 10.96}, {'connected_gene': 'STK4', 'score': 7.68}, {'connected_gene': 'PIR48188', 'score': 0.37}, {'connected_gene': 'ENSG00000252021', 'score': 0.22}]
chr20 GH20I045052 45052513 45054002 1.07 [{'connected_gene': 'KCNS1', 'score': 17.46}, {'connected_gene': 'WFDC5', 'score': 10.58}, {'connected_gene': 'STK4', 'score': 8.14}, {'connected_gene': 'PIR48188', 'score': 0.34}, {'connected_gene': 'ENSG00000252021', 'score': 0.25}]
chr20 GH20I045040 45040779 45043050 1.15 [{'connected_gene': 'KCNS1', 'score': 17.67}, {'connected_gene': 'WFDC5', 'score': 10.98}, {'connected_gene': 'STK4', 'score': 8.04}, {'connected_gene': 'PIR48188', 'score': 0.29}, {'connected_gene': 'ENSG00000252021', 'score': 0.28}]
chr20 GH20I045066 45066848 45068640 0.63 [{'connected_gene': 'KCNS1', 'score': 11.35}, {'connected_gene': 'WFDC5', 'score': 10.98}, {'connected_gene': 'STK4', 'score': 8.88}, {'connected_gene': 'PIR48188', 'score': 0.44}, {'connected_gene': 'ENSG00000252021', 'score': 0.21}]
chr20 GH20I045046 45046859 45048313 0.2 [{'connected_gene': 'KCNS1', 'score': 11.47}, {'connected_gene': 'WFDC5', 'score': 10.29}, {'connected_gene': 'PIR48188', 'score': 0.31}, {'connected_gene': 'ENSG00000252021', 'score': 0.26}, {'connected_gene': 'STK4', 'score': 0.18}]
chr20 GH20I045039 45039000 45040172 0.92 [{'connected_gene': 'KCNS1', 'score': 11.49}, {'connected_gene': 'WFDC5', 'score': 10.97}, {'connected_gene': 'PIR48188', 'score': 0.28}, {'connected_gene': 'ENSG00000252021', 'score': 0.28}, {'connected_gene': 'STK4', 'score': 0.19}]
chr3 GH03I049275 49275709 49280063 1.72 [{'connected_gene': 'C3orf62', 'score': 550.77}, {'connected_gene': 'WDR6', 'score': 51.27}, {'connected_gene': 'AMT', 'score': 41.86}, {'connected_gene': 'MST1', 'score': 3.69}, {'connected_gene': 'MIR4271', 'score': 0.77}, {'connected_gene': 'USP4', 'score': 0.21}]
chr3 GH03I049670 49670641 49672400 1.08 [{'connected_gene': 'APEH', 'score': 550.77}, {'connected_gene': 'AMT', 'score': 25.67}, {'connected_gene': 'BSN-AS1', 'score': 10.98}, {'connected_gene': 'BSN', 'score': 10.81}, {'connected_gene': 'BSN-AS2', 'score': 10.81}, {'connected_gene': 'CDHR4', 'score': 10.71}, {'connected_gene': 'UBA7', 'score': 8.58}, {'connected_gene': 'MST1', 'score': 7.83}, {'connected_gene': 'PIR32155', 'score': 0.44}, {'connected_gene': 'GC03P049421', 'score': 0.07}]
chr3 GH03I049406 49406002 49408200 0.85 [{'connected_gene': 'AMT', 'score': 36.06}, {'connected_gene': 'USP4', 'score': 14.76}, {'connected_gene': 'C3orf62', 'score': 10.39}, {'connected_gene': 'CCDC71', 'score': 10.14}, {'connected_gene': 'KLHDC8B', 'score': 10.14}, {'connected_gene': 'MST1', 'score': 3.69}, {'connected_gene': 'RHOA', 'score': 0.44}, {'connected_gene': 'TCTA', 'score': 0.44}, {'connected_gene': 'RHOA-IT1', 'score': 0.26}]
chr3 GH03I049354 49354565 49356061 0.43 [{'connected_gene': 'AMT', 'score': 45.11}, {'connected_gene': 'MST1', 'score': 3.69}, {'connected_gene': 'GC03M049358', 'score': 0.77}, {'connected_gene': 'USP4', 'score': 0.39}]
chr3 GH03I050212 50212494 50213375 0.63 [{'connected_gene': 'AMT', 'score': 7.88}, {'connected_gene': 'MST1', 'score': 4.64}, {'connected_gene': 'SLC38A3', 'score': 0.44}, {'connected_gene': 'GNAI2', 'score': 0.39}]
chr3 GH03I049443 49443402 49447067 1.28 [{'connected_gene': 'AMT', 'score': 44.66}, {'connected_gene': 'IP6K2', 'score': 13.74}, {'connected_gene': 'WDR6', 'score': 12.41}, {'connected_gene': 'QRICH1', 'score': 10.71}, {'connected_gene': 'MST1', 'score': 3.48}, {'connected_gene': 'NICN1', 'score': 0.37}, {'connected_gene': 'RNA5SP130', 'score': 0.34}, {'connected_gene': 'GC03P049421', 'score': 0.34}, {'connected_gene': 'GC03M049467', 'score': 0.34}]
chr3 GH03I049486 49486675 49488402 0.2 [{'connected_gene': 'AMT', 'score': 39.36}, {'connected_gene': 'WDR6', 'score': 15.18}, {'connected_gene': 'FAM212A', 'score': 11.67}, {'connected_gene': 'BSN', 'score': 10.53}, {'connected_gene': 'BSN-AS1', 'score': 10.43}, {'connected_gene': 'BSN-AS2', 'score': 10.39}, {'connected_gene': 'IP6K2', 'score': 5.25}, {'connected_gene': 'MST1', 'score': 3.75}, {'connected_gene': 'DAG1', 'score': 0.37}, {'connected_gene': 'PIR41851', 'score': 0.26}, {'connected_gene': 'GC03P049421', 'score': 0.2}]
chr3 GH03I049498 49498741 49502599 1.32 [{'connected_gene': 'AMT', 'score': 43.99}, {'connected_gene': 'WDR6', 'score': 15.27}, {'connected_gene': 'FAM212A', 'score': 11.74}, {'connected_gene': 'MST1', 'score': 3.72}, {'connected_gene': 'DAG1', 'score': 0.29}, {'connected_gene': 'PIR41851', 'score': 0.29}, {'connected_gene': 'GC03P049421', 'score': 0.18}]
chr3 GH03I049370 49370054 49372677 0.2 [{'connected_gene': 'AMT', 'score': 45.02}, {'connected_gene': 'WDR6', 'score': 15.67}, {'connected_gene': 'FAM212A', 'score': 11.81}, {'connected_gene': 'MST1', 'score': 3.69}, {'connected_gene': 'RHOA-IT1', 'score': 0.77}, {'connected_gene': 'TCTA', 'score': 0.26}, {'connected_gene': 'RHOA', 'score': 0.26}]
chr3 GH03I049458 49458548 49464193 1.22 [{'connected_gene': 'AMT', 'score': 44.98}, {'connected_gene': 'WDR6', 'score': 14.63}, {'connected_gene': 'FAM212A', 'score': 4.68}, {'connected_gene': 'MST1', 'score': 3.71}, {'connected_gene': 'RNA5SP130', 'score': 0.44}, {'connected_gene': 'GC03M049467', 'score': 0.44}, {'connected_gene': 'NICN1', 'score': 0.29}, {'connected_gene': 'GC03P049421', 'score': 0.28}]
chr3 GH03I049420 49420371 49423507 1.87 [{'connected_gene': 'AMT', 'score': 595.49}, {'connected_gene': 'GC03P049421', 'score': 550.77}, {'connected_gene': 'WDR6', 'score': 15.54}, {'connected_gene': 'FAM212A', 'score': 11.8}, {'connected_gene': 'RNA5SP130', 'score': 11.53}, {'connected_gene': 'DAG1', 'score': 11.53}, {'connected_gene': 'LAMB2', 'score': 9.78}, {'connected_gene': 'MST1', 'score': 3.59}, {'connected_gene': 'NICN1', 'score': 0.44}, {'connected_gene': 'ENSG00000283189', 'score': 0.44}]
chr3 GH03I049467 49467300 49472548 2.23 [{'connected_gene': 'DAG1', 'score': 550.77}, {'connected_gene': 'AMT', 'score': 55.59}, {'connected_gene': 'WDR6', 'score': 15.31}, {'connected_gene': 'LAMB2', 'score': 10.65}, {'connected_gene': 'MST1', 'score': 5.66}, {'connected_gene': 'USP4', 'score': 4.91}, {'connected_gene': 'GC03P049421', 'score': 0.25}, {'connected_gene': 'PIR41851', 'score': 0.21}]
chr20 GH20I045035 45035585 45037401 1.32 [{'connected_gene': 'WFDC5', 'score': 10.69}, {'connected_gene': 'PABPC1L', 'score': 10.27}, {'connected_gene': 'YWHAB', 'score': 4.3}, {'connected_gene': 'ENSG00000252021', 'score': 0.29}, {'connected_gene': 'PIR48188', 'score': 0.28}, {'connected_gene': 'STK4', 'score': 0.19}]
chr20 GH20I045027 45027977 45032036 0.43 [{'connected_gene': 'WFDC5', 'score': 10.68}, {'connected_gene': 'PABPC1L', 'score': 10.44}, {'connected_gene': 'STK4', 'score': 8.85}, {'connected_gene': 'TOMM34', 'score': 5.78}, {'connected_gene': 'YWHAB', 'score': 4.57}, {'connected_gene': 'ENSG00000252021', 'score': 0.31}, {'connected_gene': 'PIR48188', 'score': 0.25}]
chr20 GH20I045086 45086093 45089534 1.15 [{'connected_gene': 'WFDC5', 'score': 10.92}, {'connected_gene': 'PABPC1L', 'score': 10.37}, {'connected_gene': 'STK4', 'score': 8.07}, {'connected_gene': 'GC20M045100', 'score': 0.44}, {'connected_gene': 'PIR51876', 'score': 0.39}]
chr20 GH20I045050 45050945 45052157 0.9 [{'connected_gene': 'WFDC5', 'score': 10.35}, {'connected_gene': 'PIR48188', 'score': 0.34}, {'connected_gene': 'ENSG00000252021', 'score': 0.25}, {'connected_gene': 'STK4', 'score': 0.17}]
chr3 GH03I050327 50327044 50329029 2.17 [{'connected_gene': 'TUSC2', 'score': 550.77}, {'connected_gene': 'NAT6', 'score': 23.25}, {'connected_gene': 'HYAL3', 'score': 13.44}, {'connected_gene': 'HYAL1', 'score': 5.06}, {'connected_gene': 'MST1', 'score': 4.44}, {'connected_gene': 'HYAL2', 'score': 0.44}]
chr3 GH03I049493 49493072 49494301 0.38 [{'connected_gene': 'WDR6', 'score': 14.62}, {'connected_gene': 'HYAL3', 'score': 3.93}, {'connected_gene': 'MST1', 'score': 3.71}, {'connected_gene': 'DAG1', 'score': 0.34}, {'connected_gene': 'PIR41851', 'score': 0.28}, {'connected_gene': 'GC03P049421', 'score': 0.19}]
chr3 GH03I049377 49377202 49380335 0.99 [{'connected_gene': 'WDR6', 'score': 15.61}, {'connected_gene': 'FAM212A', 'score': 11.86}, {'connected_gene': 'RBM6', 'score': 4.42}, {'connected_gene': 'MST1', 'score': 3.69}, {'connected_gene': 'GMPPB', 'score': 3.51}, {'connected_gene': 'RHOA-IT1', 'score': 0.39}, {'connected_gene': 'RHOA', 'score': 0.29}, {'connected_gene': 'TCTA', 'score': 0.29}]
chr3 GH03I049694 49694586 49695885 0.63 [{'connected_gene': 'WDR6', 'score': 42.37}, {'connected_gene': 'AMIGO3', 'score': 13.3}, {'connected_gene': 'GMPPB', 'score': 13.27}, {'connected_gene': 'APEH', 'score': 12.2}, {'connected_gene': 'BSN-AS1', 'score': 11.18}, {'connected_gene': 'BSN', 'score': 11.06}, {'connected_gene': 'AMT', 'score': 9.56}, {'connected_gene': 'C3orf18', 'score': 5.48}, {'connected_gene': 'RNF123', 'score': 0.44}, {'connected_gene': 'MST1', 'score': 0.44}, {'connected_gene': 'GC03P049421', 'score': 0.06}]
chr3 GH03I050221 50221505 50222324 0.94 [{'connected_gene': 'CYB561D2', 'score': 11.32}, {'connected_gene': 'MST1', 'score': 5.18}, {'connected_gene': 'GNAI2', 'score': 0.77}, {'connected_gene': 'SLC38A3', 'score': 0.37}]
chr3 GH03I050201 50201679 50206501 2.06 [{'connected_gene': 'SLC38A3', 'score': 557.57}, {'connected_gene': 'RBM6', 'score': 15.59}, {'connected_gene': 'GNAI2', 'score': 13.11}, {'connected_gene': 'SEMA3B-AS1', 'score': 12.15}, {'connected_gene': 'SEMA3B', 'score': 12.15}, {'connected_gene': 'LSMEM2', 'score': 12.13}, {'connected_gene': 'CYB561D2', 'score': 11.97}, {'connected_gene': 'HYAL3', 'score': 11.95}, {'connected_gene': 'SEMA3F', 'score': 11.71}, {'connected_gene': 'SEMA3F-AS1', 'score': 11.4}, {'connected_gene': 'RBM5', 'score': 10.47}, {'connected_gene': 'HYAL1', 'score': 5.96}, {'connected_gene': 'MST1', 'score': 4.75}, {'connected_gene': 'MAPKAPK3', 'score': 4.08}, {'connected_gene': 'GNAT1', 'score': 0.39}]
chr20 GH20I044984 44984014 44988080 0.38 [{'connected_gene': 'TOMM34', 'score': 17.63}, {'connected_gene': 'STK4', 'score': 9.11}, {'connected_gene': 'ENSG00000252021', 'score': 0.37}]
chr20 GH20I045005 45005801 45007620 0.31 [{'connected_gene': 'STK4-AS1', 'score': 11.94}, {'connected_gene': 'STK4', 'score': 11.94}, {'connected_gene': 'TOMM34', 'score': 11.93}, {'connected_gene': 'PABPC1L', 'score': 10.79}, {'connected_gene': 'WFDC5', 'score': 10.1}, {'connected_gene': 'ENSG00000252021', 'score': 0.77}, {'connected_gene': 'PIR48188', 'score': 0.2}]
chr20 GH20I044640 44640672 44653201 2.57 [{'connected_gene': 'ADA', 'score': 561.63}, {'connected_gene': 'GC20M044554', 'score': 550.77}, {'connected_gene': 'GDAP1L1', 'score': 13.68}, {'connected_gene': 'KCNK15', 'score': 11.65}, {'connected_gene': 'PKIG', 'score': 11.25}, {'connected_gene': 'WISP2', 'score': 10.66}, {'connected_gene': 'SYS1', 'score': 9.78}, {'connected_gene': 'ENSG00000132832', 'score': 9.01}, {'connected_gene': 'OSER1', 'score': 3.0}, {'connected_gene': 'STK4', 'score': 1.7}, {'connected_gene': 'GC20P044636', 'score': 0.39}]
chr3 GH03I049685 49685755 49685857 0.46 [{'connected_gene': 'PIR43040', 'score': 550.77}, {'connected_gene': 'ENSG00000259970', 'score': 550.77}, {'connected_gene': 'MST1', 'score': 0.77}, {'connected_gene': 'PIR39139', 'score': 0.77}, {'connected_gene': 'GC03P049421', 'score': 0.07}]
chr20 GH20I045019 45019061 45020972 0.71 [{'connected_gene': 'ENSG00000252021', 'score': 0.37}, {'connected_gene': 'STK4', 'score': 0.23}, {'connected_gene': 'PIR48188', 'score': 0.22}]
chr3 GH03I049721 49721967 49726179 2.2 [{'connected_gene': 'PIR59970', 'score': 550.77}, {'connected_gene': 'GC03M049731', 'score': 550.77}, {'connected_gene': 'GC03P049723', 'score': 550.77}, {'connected_gene': 'GMPPB', 'score': 550.77}, {'connected_gene': 'PIR51040', 'score': 550.77}, {'connected_gene': 'GC03M049732', 'score': 550.77}, {'connected_gene': 'FAM212A', 'score': 23.36}, {'connected_gene': 'AMT', 'score': 14.82}, {'connected_gene': 'PHF5EP', 'score': 11.8}, {'connected_gene': 'IP6K1', 'score': 11.78}, {'connected_gene': 'TRAIP', 'score': 10.39}, {'connected_gene': 'MST1', 'score': 5.93}, {'connected_gene': 'GC03P049421', 'score': 0.06}]
chr3 GH03I049260 49260110 49262229 0.38 [{'connected_gene': 'ENSG00000225399', 'score': 550.77}, {'connected_gene': 'WDR6', 'score': 41.62}, {'connected_gene': 'AMT', 'score': 40.0}, {'connected_gene': 'MST1', 'score': 4.92}, {'connected_gene': 'ENSG00000199546', 'score': 0.44}]
chr20 GH20I044493 44493549 44498361 1.25 [{'connected_gene': 'GC20P044495', 'score': 550.77}, {'connected_gene': 'PIR46342', 'score': 550.77}, {'connected_gene': 'PKIG', 'score': 17.51}, {'connected_gene': 'TTPAL', 'score': 17.4}, {'connected_gene': 'SERINC3', 'score': 13.18}, {'connected_gene': 'RPL37AP1', 'score': 12.54}, {'connected_gene': 'LINC01620', 'score': 11.14}, {'connected_gene': 'LINC01430', 'score': 11.14}, {'connected_gene': 'OSER1', 'score': 1.56}, {'connected_gene': 'ADA', 'score': 1.48}, {'connected_gene': 'STK4', 'score': 1.22}, {'connected_gene': 'PIR60204', 'score': 0.77}, {'connected_gene': 'GC20P044491', 'score': 0.77}, {'connected_gene': 'GC20P044473', 'score': 0.34}]

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