PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000267377	[[38677203, 38677309], [38677647, 38677814], [38678250, 38682272]]	[[38678594, 38679770]]
NM_001049	[[38677203, 38677309], [38677647, 38677814], [38678250, 38682268]]	[[38678594, 38679770]]

Promoter

Chrom	Start	End	Description
chr14	38677099	38677117	CAGE_peak_5_at_SSTR1_5end
chr14	38677123	38677171	CAGE_peak_3_at_SSTR1_5end
chr14	38678295	38678312	CAGE_peak_1_at_SSTR1_5end
chr14	38678329	38678340	CAGE_peak_4_at_SSTR1_5end
chr14	38678617	38678678	CAGE_peak_2_at_SSTR1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I038403	38403055	38406718	0.74	[{'connected_gene': 'SSTR1', 'score': 10.07}, {'connected_gene': 'GEMIN2', 'score': 5.24}, {'connected_gene': 'GC14M038447', 'score': 0.26}, {'connected_gene': 'GC14P038355', 'score': 0.25}]
chr14	GH14I037994	37994580	37995795	0.31	[{'connected_gene': 'SSTR1', 'score': 10.24}, {'connected_gene': 'ENSG00000258696', 'score': 0.44}, {'connected_gene': 'LINC00517', 'score': 0.16}, {'connected_gene': 'TTC6', 'score': 0.05}]
chr14	GH14I038042	38042287	38042800	0.72	[{'connected_gene': 'SSTR1', 'score': 11.02}, {'connected_gene': 'LOC105370456', 'score': 0.77}, {'connected_gene': 'ENSG00000258649', 'score': 0.11}, {'connected_gene': 'ENSG00000259048', 'score': 0.1}]
chr14	GH14I038187	38187362	38187822	0.71	[{'connected_gene': 'SSTR1', 'score': 12.25}, {'connected_gene': 'ENSG00000258649', 'score': 0.77}, {'connected_gene': 'ENSG00000259048', 'score': 0.44}, {'connected_gene': 'LOC105370456', 'score': 0.11}]
chr14	GH14I038496	38496557	38496848	0.24	[{'connected_gene': 'SSTR1', 'score': 4.56}, {'connected_gene': 'GC14M038527', 'score': 0.28}, {'connected_gene': 'GC14M038447', 'score': 0.25}]
chr14	GH14I038203	38203376	38203525	0.2	[{'connected_gene': 'SSTR1', 'score': 0.77}, {'connected_gene': 'ENSG00000259048', 'score': 0.44}, {'connected_gene': 'GC14M038195', 'score': 0.29}]
chr14	GH14I038207	38203996	38204105	0.31	[{'connected_gene': 'SSTR1', 'score': 0.77}, {'connected_gene': 'ENSG00000259048', 'score': 0.44}, {'connected_gene': 'GC14M038195', 'score': 0.29}]
chr14	GH14I037901	37901630	37902733	0.2	[{'connected_gene': 'LINC00517', 'score': 550.77}, {'connected_gene': 'SSTR1', 'score': 9.95}, {'connected_gene': 'RNU6-1277P', 'score': 0.19}, {'connected_gene': 'TTC6', 'score': 0.06}]
chr14	GH14I038204	38204782	38204885	0.38	[{'connected_gene': 'CLEC14A', 'score': 10.9}, {'connected_gene': 'SSTR1', 'score': 0.77}, {'connected_gene': 'ENSG00000259048', 'score': 0.39}, {'connected_gene': 'GC14M038195', 'score': 0.29}]
chr14	GH14I038196	38196441	38197505	0.76	[{'connected_gene': 'CLEC14A', 'score': 10.75}, {'connected_gene': 'SSTR1', 'score': 6.22}, {'connected_gene': 'ENSG00000259048', 'score': 0.77}, {'connected_gene': 'ENSG00000258649', 'score': 0.44}, {'connected_gene': 'GC14M038195', 'score': 0.28}]
chr14	GH14I038197	38197776	38200783	0.86	[{'connected_gene': 'CLEC14A', 'score': 10.42}, {'connected_gene': 'SSTR1', 'score': 4.53}, {'connected_gene': 'ENSG00000259048', 'score': 0.77}, {'connected_gene': 'ENSG00000258649', 'score': 0.44}, {'connected_gene': 'GC14M038195', 'score': 0.28}]
chr14	GH14I038253	38253703	38258127	1.85	[{'connected_gene': 'CLEC14A', 'score': 562.12}, {'connected_gene': 'PIR37390', 'score': 550.77}, {'connected_gene': 'GC14M038256', 'score': 550.77}, {'connected_gene': 'SSTR1', 'score': 10.76}]
chr14	GH14I038188	38188948	38192720	0.63	[{'connected_gene': 'ENSG00000258649', 'score': 550.77}, {'connected_gene': 'SSTR1', 'score': 6.77}, {'connected_gene': 'GEMIN2', 'score': 3.82}, {'connected_gene': 'ENSG00000259048', 'score': 0.77}, {'connected_gene': 'LOC105370456', 'score': 0.1}]
chr14	GH14I038206	38206852	38211385	1.81	[{'connected_gene': 'GC14P038209', 'score': 550.77}, {'connected_gene': 'SSTR1', 'score': 550.77}, {'connected_gene': 'PNN', 'score': 19.02}, {'connected_gene': 'CLEC14A', 'score': 10.77}, {'connected_gene': 'GC14M038195', 'score': 0.31}]
chr14	GH14I038205	38202444	38203112	0.49	[{'connected_gene': 'ENSG00000259048', 'score': 0.44}, {'connected_gene': 'SSTR1', 'score': 0.44}, {'connected_gene': 'ENSG00000258649', 'score': 0.39}, {'connected_gene': 'GC14M038195', 'score': 0.29}]
chr14	GH14I038202	38201456	38201705	0.38	[{'connected_gene': 'ENSG00000259048', 'score': 0.44}, {'connected_gene': 'SSTR1', 'score': 0.44}, {'connected_gene': 'ENSG00000258649', 'score': 0.39}, {'connected_gene': 'GC14M038195', 'score': 0.29}]
chr14	GH14I038201	38201816	38201985	0.38	[{'connected_gene': 'ENSG00000259048', 'score': 0.44}, {'connected_gene': 'SSTR1', 'score': 0.44}, {'connected_gene': 'ENSG00000258649', 'score': 0.39}, {'connected_gene': 'GC14M038195', 'score': 0.29}]
chr14	GH14I038289	38289787	38292434	0.91	[{'connected_gene': 'ENSG00000259072', 'score': 550.77}, {'connected_gene': 'CLEC14A', 'score': 11.92}, {'connected_gene': 'SSTR1', 'score': 11.08}, {'connected_gene': 'PIR41157', 'score': 0.25}]