PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000392653	[[153028588, 153029230], [153029946, 153030013]]	[[153028992, 153029211]]
NM_005988	[[153028595, 153029230], [153029946, 153029988]]	[[153028992, 153029211]]

Promoter

Chrom	Start	End	Description
chr1	153029980	153029995	CAGE_peak_1_at_SPRR2A_5end
chr1	153085984	153085999	CAGE_peak_1_at_SPRR2F_5end,CAGE_peak_2_at_SPRR2A_5end
chr1	153113940	153113972	CAGE_peak_1_at_SPRR2C_5end,CAGE_peak_2_at_SPRR2D_5end,CAGE_peak_3_at_SPRR2A_5end
chr1	153113974	153113991	CAGE_peak_3_at_SPRR2C_5end,CAGE_peak_4_at_SPRR2D_5end,CAGE_peak_5_at_SPRR2A_5end
chr1	153114001	153114013	CAGE_peak_2_at_SPRR2C_5end,CAGE_peak_3_at_SPRR2D_5end,CAGE_peak_4_at_SPRR2A_5end
chr1	153114023	153114029	CAGE_peak_4_at_SPRR2C_5end,CAGE_peak_5_at_SPRR2D_5end,CAGE_peak_6_at_SPRR2A_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I153070	153070741	153070800	0.5	[{'connected_gene': 'SPRR2B', 'score': 550.77}, {'connected_gene': 'SPRR2A', 'score': 0.39}]
chr1	GH01I153057	153057502	153057561	0.61	[{'connected_gene': 'SPRR2A', 'score': 550.77}, {'connected_gene': 'SPRR1B', 'score': 10.67}, {'connected_gene': 'SPRR1A', 'score': 10.3}, {'connected_gene': 'SPRR2G', 'score': 9.79}, {'connected_gene': 'GC01P153042', 'score': 0.37}]