PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000283147	[[7727029, 7727852], [7845372, 7845565], [7861683, 7861832], [7862533, 7862731], [7879306, 7879383], [7880223, 7880334], [7880426, 7881655]]	[[7727188, 7727852], [7845372, 7845565], [7861683, 7861832], [7862533, 7862731], [7879306, 7879383], [7880223, 7880334], [7880426, 7880576]]
NM_001718	[[7726331, 7727852], [7845372, 7845565], [7861683, 7861832], [7862533, 7862731], [7879306, 7879383], [7880223, 7880334], [7880426, 7881961]]	[[7727188, 7727852], [7845372, 7845565], [7861683, 7861832], [7862533, 7862731], [7879306, 7879383], [7880223, 7880334], [7880426, 7880576]]

Promoter

Chrom	Start	End	Description
chr6	7726323	7726348	CAGE_peak_1_at_BMP6_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I007914	7914871	7916093	1.01	[{'connected_gene': 'TXNDC5', 'score': 10.81}, {'connected_gene': 'BMP6', 'score': 10.71}, {'connected_gene': 'BLOC1S5', 'score': 10.49}, {'connected_gene': 'EEF1E1', 'score': 4.23}, {'connected_gene': 'SNRNP48', 'score': 1.34}, {'connected_gene': 'GC06P007902', 'score': 0.39}, {'connected_gene': 'GC06M007933', 'score': 0.37}, {'connected_gene': 'BLOC1S5-TXNDC5', 'score': 0.11}]
chr6	GH06I007912	7912208	7912357	0.95	[{'connected_gene': 'TXNDC5', 'score': 550.77}, {'connected_gene': 'BMP6', 'score': 10.71}, {'connected_gene': 'BLOC1S5', 'score': 10.48}, {'connected_gene': 'GC06P007902', 'score': 0.44}, {'connected_gene': 'GC06M007933', 'score': 0.34}, {'connected_gene': 'BLOC1S5-TXNDC5', 'score': 0.1}]
chr6	GH06I007887	7887548	7888673	0.31	[{'connected_gene': 'TXNDC5', 'score': 14.86}, {'connected_gene': 'BMP6', 'score': 11.24}, {'connected_gene': 'BLOC1S5', 'score': 10.72}, {'connected_gene': 'PIR41509', 'score': 0.44}, {'connected_gene': 'GC06P007902', 'score': 0.39}, {'connected_gene': 'BLOC1S5-TXNDC5', 'score': 0.1}]
chr6	GH06I007908	7908601	7912011	2.41	[{'connected_gene': 'TXNDC5', 'score': 566.79}, {'connected_gene': 'BMP6', 'score': 10.71}, {'connected_gene': 'BLOC1S5', 'score': 10.48}, {'connected_gene': 'LOC100506207', 'score': 4.24}, {'connected_gene': 'GC06P007902', 'score': 0.44}, {'connected_gene': 'BLOC1S5-TXNDC5', 'score': 0.1}]
chr6	GH06I007847	7847200	7847400	0.54	[{'connected_gene': 'TXNDC5', 'score': 4.64}, {'connected_gene': 'GC06M007850', 'score': 0.77}, {'connected_gene': 'GC06M007796', 'score': 0.28}, {'connected_gene': 'BMP6', 'score': 0.13}]
chr6	GH06I007959	7959096	7963419	0.79	[{'connected_gene': 'BMP6', 'score': 10.99}, {'connected_gene': 'TXNDC5', 'score': 4.71}, {'connected_gene': 'GC06M007947', 'score': 0.39}, {'connected_gene': 'GC06M007967', 'score': 0.39}, {'connected_gene': 'BLOC1S5-TXNDC5', 'score': 0.15}]
chr6	GH06I007888	7888923	7890890	0.31	[{'connected_gene': 'BMP6', 'score': 11.24}, {'connected_gene': 'BLOC1S5', 'score': 10.54}, {'connected_gene': 'TXNDC5', 'score': 5.93}, {'connected_gene': 'PIR41509', 'score': 0.44}, {'connected_gene': 'GC06P007902', 'score': 0.39}, {'connected_gene': 'BLOC1S5-TXNDC5', 'score': 0.09}]
chr6	GH06I007996	7996474	7997505	1.47	[{'connected_gene': 'BMP6', 'score': 13.85}, {'connected_gene': 'BLOC1S5', 'score': 11.31}, {'connected_gene': 'TXNDC5', 'score': 3.61}, {'connected_gene': 'GC06P007990', 'score': 0.44}, {'connected_gene': 'PIR38170', 'score': 0.44}, {'connected_gene': 'PIR57650', 'score': 0.37}, {'connected_gene': 'BLOC1S5-TXNDC5', 'score': 0.2}]
chr6	GH06I007916	7916692	7918355	0.95	[{'connected_gene': 'BMP6', 'score': 10.71}, {'connected_gene': 'BLOC1S5', 'score': 10.49}, {'connected_gene': 'TXNDC5', 'score': 0.44}, {'connected_gene': 'GC06M007933', 'score': 0.37}, {'connected_gene': 'BLOC1S5-TXNDC5', 'score': 0.11}]
chr6	GH06I007725	7725908	7732830	2.62	[{'connected_gene': 'BMP6', 'score': 555.28}, {'connected_gene': 'LOC105374907', 'score': 550.77}, {'connected_gene': 'BLOC1S5', 'score': 10.99}, {'connected_gene': 'TXNDC5', 'score': 1.36}, {'connected_gene': 'GC06M007768', 'score': 0.23}]
chr6	GH06I007770	7770768	7770917	0.43	[{'connected_gene': 'BMP6', 'score': 11.52}, {'connected_gene': 'GC06M007768', 'score': 0.39}, {'connected_gene': 'LOC105374907', 'score': 0.26}]
chr6	GH06I007758	7758548	7758697	0.2	[{'connected_gene': 'BMP6', 'score': 11.42}, {'connected_gene': 'GC06M007768', 'score': 0.34}, {'connected_gene': 'LOC105374907', 'score': 0.29}]
chr6	GH06I007974	7974344	7977123	1.49	[{'connected_gene': 'BMP6', 'score': 11.49}, {'connected_gene': 'LOC101928076', 'score': 6.2}, {'connected_gene': 'TXNDC5', 'score': 4.48}, {'connected_gene': 'GC06M007967', 'score': 0.77}, {'connected_gene': 'PIP5K1P1', 'score': 0.39}, {'connected_gene': 'BLOC1S5-TXNDC5', 'score': 0.17}]
chr6	GH06I007958	7958325	7958938	0.31	[{'connected_gene': 'BMP6', 'score': 10.34}, {'connected_gene': 'GC06M007947', 'score': 0.39}, {'connected_gene': 'GC06M007967', 'score': 0.39}, {'connected_gene': 'BLOC1S5-TXNDC5', 'score': 0.14}]
chr6	GH06I007999	7999466	8001353	0.74	[{'connected_gene': 'BLOC1S5', 'score': 19.91}, {'connected_gene': 'TXNDC5', 'score': 12.42}, {'connected_gene': 'BMP6', 'score': 10.85}, {'connected_gene': 'ENSG00000238221', 'score': 9.4}, {'connected_gene': 'PIR57650', 'score': 0.39}, {'connected_gene': 'PIR38170', 'score': 0.39}, {'connected_gene': 'GC06P007990', 'score': 0.39}, {'connected_gene': 'GC06M007999', 'score': 0.34}, {'connected_gene': 'BLOC1S5-TXNDC5', 'score': 0.21}]
chr6	GH06I007991	7991602	7993385	1.18	[{'connected_gene': 'BLOC1S5', 'score': 18.39}, {'connected_gene': 'BMP6', 'score': 11.06}, {'connected_gene': 'PIP5K1P1', 'score': 5.67}, {'connected_gene': 'RIOK1', 'score': 4.82}, {'connected_gene': 'PIR38170', 'score': 0.77}, {'connected_gene': 'GC06P007990', 'score': 0.77}, {'connected_gene': 'PIR57650', 'score': 0.34}, {'connected_gene': 'BLOC1S5-TXNDC5', 'score': 0.19}]
chr6	GH06I008006	8006201	8006600	0.77	[{'connected_gene': 'BLOC1S5', 'score': 19.28}, {'connected_gene': 'BMP6', 'score': 10.99}, {'connected_gene': 'PIR57650', 'score': 0.44}, {'connected_gene': 'GC06M007999', 'score': 0.39}, {'connected_gene': 'GC06P007990', 'score': 0.37}, {'connected_gene': 'PIR38170', 'score': 0.37}, {'connected_gene': 'BLOC1S5-TXNDC5', 'score': 0.22}]
chr6	GH06I007997	7997961	7998785	0.72	[{'connected_gene': 'BLOC1S5', 'score': 18.31}, {'connected_gene': 'BMP6', 'score': 11.06}, {'connected_gene': 'GC06P007990', 'score': 0.44}, {'connected_gene': 'PIR38170', 'score': 0.44}, {'connected_gene': 'PIR57650', 'score': 0.37}, {'connected_gene': 'BLOC1S5-TXNDC5', 'score': 0.2}]
chr6	GH06I007723	7723148	7723297	0.69	[{'connected_gene': 'BLOC1S5', 'score': 10.2}, {'connected_gene': 'BMP6', 'score': 0.77}, {'connected_gene': 'GC06M007704', 'score': 0.44}]
chr6	GH06I007741	7741943	7744091	0.43	[{'connected_gene': 'BLOC1S5', 'score': 10.25}, {'connected_gene': 'LOC105374907', 'score': 0.37}, {'connected_gene': 'BMP6', 'score': 0.37}, {'connected_gene': 'GC06M007768', 'score': 0.28}]
chr6	GH06I007882	7882346	7883344	0.87	[{'connected_gene': 'PIR41509', 'score': 550.77}, {'connected_gene': 'TXNDC5', 'score': 17.18}, {'connected_gene': 'BMP6', 'score': 11.04}, {'connected_gene': 'BLOC1S5', 'score': 10.71}, {'connected_gene': 'GC06P007902', 'score': 0.34}, {'connected_gene': 'BLOC1S5-TXNDC5', 'score': 0.09}]
chr6	GH06I007973	7973668	7973817	0.66	[{'connected_gene': 'GC06M007967', 'score': 550.77}, {'connected_gene': 'BMP6', 'score': 10.92}, {'connected_gene': 'PIP5K1P1', 'score': 0.39}, {'connected_gene': 'BLOC1S5-TXNDC5', 'score': 0.16}]
chr6	GH06I007848	7847028	7847177	0.31	[{'connected_gene': 'GC06M007850', 'score': 0.77}, {'connected_gene': 'GC06M007796', 'score': 0.28}, {'connected_gene': 'BMP6', 'score': 0.13}]
chr6	GH06I007784	7784809	7787800	0.77	[{'connected_gene': 'GC06P007786', 'score': 550.77}, {'connected_gene': 'BMP6', 'score': 9.52}, {'connected_gene': 'GC06M007768', 'score': 0.77}]
chr6	GH06I007828	7828209	7828383	0.2	[{'connected_gene': 'GC06M007796', 'score': 0.37}, {'connected_gene': 'GC06M007850', 'score': 0.34}, {'connected_gene': 'BMP6', 'score': 0.15}]