PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000393715	[[12282912, 12283498], [12285023, 12285315], [12286489, 12286623], [12293756, 12293915]]	[[12283458, 12283498], [12285023, 12285315], [12286489, 12286547]]
ENST00000351291	[[12283122, 12283498], [12285165, 12285315], [12286141, 12286407], [12286489, 12286623], [12289590, 12289671], [12291560, 12291623], [12293756, 12293852]]	[[12283397, 12283498], [12285165, 12285315], [12286141, 12286407], [12286489, 12286623], [12289590, 12289671], [12291560, 12291623], [12293756, 12293852]]
ENST00000309608	[[12283122, 12283498], [12285165, 12285315], [12286489, 12286623], [12289590, 12289671], [12291560, 12291623], [12293756, 12293852]]	[[12285227, 12285315], [12286489, 12286623], [12289590, 12289671], [12291560, 12291623], [12293756, 12293852]]
ENST00000262365	[[12283122, 12283498], [12285165, 12285315], [12286141, 12286407], [12286489, 12286623], [12287858, 12287960], [12289590, 12289671], [12291560, 12291623], [12293756, 12293852]]	[[12283397, 12283498], [12285165, 12285315], [12286141, 12286407], [12286489, 12286623], [12287858, 12287960], [12289590, 12289671], [12291560, 12291623], [12293756, 12293852]]
ENST00000527331	[[12283403, 12283498], [12285165, 12285315], [12286141, 12286407], [12286489, 12286623], [12289590, 12289671], [12291560, 12291623], [12293756, 12293852]]	[[12283403, 12283498], [12285165, 12285315], [12286141, 12286407], [12286489, 12286623], [12289590, 12289671], [12291560, 12291623], [12293756, 12293852]]
ENST00000532480	[[12285242, 12285315], [12286489, 12286623], [12289590, 12289671], [12291560, 12291623], [12293756, 12293852]]	[[12285242, 12285315], [12286489, 12286623], [12289590, 12289671], [12291560, 12291623], [12293756, 12293852]]
NM_001137610	[[12283122, 12283498], [12285165, 12285315], [12286141, 12286407], [12286489, 12286623], [12287858, 12287960], [12289590, 12289671], [12291560, 12291623], [12293756, 12293852]]	[[12283397, 12283498], [12285165, 12285315], [12286141, 12286407], [12286489, 12286623], [12287858, 12287960], [12289590, 12289671], [12291560, 12291623], [12293756, 12293852]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I011482	11482572	11484539	1.01	[{'connected_gene': 'FAM167A', 'score': 24.74}, {'connected_gene': 'FAM90A2P', 'score': 14.63}, {'connected_gene': 'LOC105379241', 'score': 14.21}, {'connected_gene': 'PINX1', 'score': 13.36}, {'connected_gene': 'LOC101929290', 'score': 13.07}, {'connected_gene': 'FAM86B1', 'score': 11.89}, {'connected_gene': 'FAM66A', 'score': 11.41}, {'connected_gene': 'MTMR9', 'score': 11.17}, {'connected_gene': 'FAM66D', 'score': 11.16}, {'connected_gene': 'ENPP7P12', 'score': 9.83}, {'connected_gene': 'FAM86B2', 'score': 9.69}, {'connected_gene': 'ENSG00000269918', 'score': 4.83}, {'connected_gene': 'BLK', 'score': 0.39}]
chr8	GH08I011506	11506133	11518124	1.63	[{'connected_gene': 'PINX1', 'score': 81.84}, {'connected_gene': 'LOC101929290', 'score': 79.19}, {'connected_gene': 'FAM90A2P', 'score': 34.12}, {'connected_gene': 'MTMR9', 'score': 30.38}, {'connected_gene': 'FAM66A', 'score': 30.21}, {'connected_gene': 'FAM167A', 'score': 24.61}, {'connected_gene': 'LOC105379241', 'score': 22.07}, {'connected_gene': 'FAM66D', 'score': 19.37}, {'connected_gene': 'FAM86B1', 'score': 11.89}, {'connected_gene': 'ENSG00000255518', 'score': 11.09}, {'connected_gene': 'ENSG00000255354', 'score': 11.09}, {'connected_gene': 'ENPP7P6', 'score': 10.34}, {'connected_gene': 'ENPP7P12', 'score': 9.83}, {'connected_gene': 'FAM86B2', 'score': 9.69}, {'connected_gene': 'LOC100129129', 'score': 6.2}, {'connected_gene': 'ENSG00000269954', 'score': 6.05}, {'connected_gene': 'ENSG00000255310', 'score': 5.95}, {'connected_gene': 'ENSG00000269918', 'score': 5.76}, {'connected_gene': 'ENSG00000270154', 'score': 5.14}, {'connected_gene': 'BLK', 'score': 4.13}]
chr8	GH08I011799	11799212	11810431	2.3	[{'connected_gene': 'FDFT1', 'score': 571.66}, {'connected_gene': 'PINX1', 'score': 30.87}, {'connected_gene': 'LOC101929290', 'score': 14.46}, {'connected_gene': 'NEIL2', 'score': 13.2}, {'connected_gene': 'CTSB', 'score': 13.05}, {'connected_gene': 'FAM86B2', 'score': 12.55}, {'connected_gene': 'LOC105379241', 'score': 10.63}, {'connected_gene': 'BLK', 'score': 10.62}, {'connected_gene': 'RPS3AP34', 'score': 10.38}, {'connected_gene': 'ENSG00000255122', 'score': 10.14}, {'connected_gene': 'SUB1P1', 'score': 7.54}, {'connected_gene': 'FAM85A', 'score': 4.46}, {'connected_gene': 'LOC105379243', 'score': 0.77}, {'connected_gene': 'PIR48315', 'score': 0.29}]
chr8	GH08I013264	13264195	13277623	2.2	[{'connected_gene': 'ENPP7P6', 'score': 19.3}, {'connected_gene': 'RPS3AP34', 'score': 18.98}, {'connected_gene': 'LOC101930149', 'score': 16.66}, {'connected_gene': 'FAM66A', 'score': 11.41}, {'connected_gene': 'ENSG00000255122', 'score': 10.14}, {'connected_gene': 'FAM86B2', 'score': 9.69}, {'connected_gene': 'DLC1', 'score': 7.77}, {'connected_gene': 'GC08M013255', 'score': 0.44}]
chr8	GH08I011994	11994843	11995949	0.56	[{'connected_gene': 'LOC105379241', 'score': 11.36}, {'connected_gene': 'FAM86B2', 'score': 5.98}, {'connected_gene': 'LOC100421446', 'score': 0.77}, {'connected_gene': 'DEFB134', 'score': 0.44}, {'connected_gene': 'DEFB135', 'score': 0.39}, {'connected_gene': 'GC08M011947', 'score': 0.1}]
chr8	GH08I013245	13245959	13248800	1.21	[{'connected_gene': 'DLC1', 'score': 11.78}, {'connected_gene': 'FAM86B2', 'score': 4.99}, {'connected_gene': 'GC08M013255', 'score': 0.37}, {'connected_gene': 'GC08M013094', 'score': 0.21}]
chr8	GH08I012437	12437800	12438000	0.84	[{'connected_gene': 'LOC100506990', 'score': 550.77}, {'connected_gene': 'FAM86B2', 'score': 550.77}, {'connected_gene': 'DEFB109E', 'score': 0.44}]
chr8	GH08I012438	12438201	12438400	0.2	[{'connected_gene': 'LOC100506990', 'score': 550.77}, {'connected_gene': 'FAM86B2', 'score': 550.77}, {'connected_gene': 'DEFB109E', 'score': 0.44}]
chr8	GH08I012435	12435800	12437601	1.65	[{'connected_gene': 'LOC100506990', 'score': 550.77}, {'connected_gene': 'FAM86B2', 'score': 550.77}]
chr8	GH08I012430	12430800	12431201	0.2	[{'connected_gene': 'GC08M012424', 'score': 0.44}, {'connected_gene': 'FAM86B2', 'score': 0.44}]