PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000369208	[[100832890, 100838967], [100841362, 100841765], [100868665, 100868834], [100895143, 100895291], [100896021, 100896128], [100896354, 100896554], [100897238, 100897324], [100897466, 100897575], [100898142, 100898232], [100901637, 100901720], [100911169, 100911811], [100912489, 100912805]]	[[100838236, 100838967], [100841362, 100841765], [100868665, 100868834], [100895143, 100895291], [100896021, 100896128], [100896354, 100896554], [100897238, 100897324], [100897466, 100897575], [100898142, 100898232], [100901637, 100901720], [100911169, 100911344]]
ENST00000262901	[[100836747, 100838967], [100841362, 100841765], [100868665, 100868834], [100895143, 100895291], [100896021, 100896128], [100896354, 100896554], [100897238, 100897324], [100897466, 100897575], [100898142, 100898232], [100901637, 100901720], [100911169, 100911553]]	[[100838236, 100838967], [100841362, 100841765], [100868665, 100868834], [100895143, 100895291], [100896021, 100896128], [100896354, 100896554], [100897238, 100897324], [100897466, 100897575], [100898142, 100898232], [100901637, 100901720], [100911169, 100911344]]
ENST00000505753	[[100838958, 100838967], [100841362, 100841918]]	None
ENST00000511871	[[100910478, 100911811], [100912489, 100912765]]	None
NM_005068	[[100836749, 100838967], [100841362, 100841765], [100868665, 100868834], [100895143, 100895291], [100896021, 100896128], [100896354, 100896554], [100897238, 100897324], [100897466, 100897575], [100898142, 100898232], [100901637, 100901720], [100911169, 100911551]]	[[100838236, 100838967], [100841362, 100841765], [100868665, 100868834], [100895143, 100895291], [100896021, 100896128], [100896354, 100896554], [100897238, 100897324], [100897466, 100897575], [100898142, 100898232], [100901637, 100901720], [100911169, 100911344]]

Promoter

Chrom	Start	End	Description
chr6	100912752	100912778	CAGE_peak_2_at_SIM1_5end
chr6	100912785	100912822	CAGE_peak_1_at_SIM1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I100460	100460748	100466158	1.09	[{'connected_gene': 'SIM1', 'score': 550.77}, {'connected_gene': 'ASCC3', 'score': 11.37}, {'connected_gene': 'LOC102724406', 'score': 11.18}, {'connected_gene': 'RPS3P5', 'score': 4.63}, {'connected_gene': 'GC06P100411', 'score': 0.23}]
chr6	GH06I100493	100493365	100493514	0.59	[{'connected_gene': 'SIM1', 'score': 11.27}, {'connected_gene': 'LOC102724406', 'score': 10.77}, {'connected_gene': 'RPS3P5', 'score': 4.63}, {'connected_gene': 'GC06P100503', 'score': 0.39}]
chr6	GH06I100479	100479605	100479714	0.67	[{'connected_gene': 'SIM1', 'score': 0.39}, {'connected_gene': 'GC06P100503', 'score': 0.34}]
chr6	GH06I100466	100466742	100468110	0.46	[{'connected_gene': 'ASCC3', 'score': 16.36}, {'connected_gene': 'LOC102724406', 'score': 10.52}, {'connected_gene': 'RPS3P5', 'score': 4.63}, {'connected_gene': 'SIM1', 'score': 0.77}, {'connected_gene': 'GC06P100503', 'score': 0.28}, {'connected_gene': 'GC06P100411', 'score': 0.22}]
chr6	GH06I100453	100453333	100459683	1.45	[{'connected_gene': 'ASCC3', 'score': 18.84}, {'connected_gene': 'LOC102724406', 'score': 11.49}, {'connected_gene': 'RPS3P5', 'score': 4.63}, {'connected_gene': 'SIM1', 'score': 2.25}, {'connected_gene': 'GC06P100411', 'score': 0.26}]
chr6	GH06I100446	100446358	100449013	0.54	[{'connected_gene': 'LOC102724406', 'score': 11.85}, {'connected_gene': 'ASCC3', 'score': 3.99}, {'connected_gene': 'SIM1', 'score': 0.37}, {'connected_gene': 'GC06P100411', 'score': 0.28}]
chr6	GH06I100420	100420825	100420994	0.2	[{'connected_gene': 'GC06P100411', 'score': 0.44}, {'connected_gene': 'LOC102724406', 'score': 0.31}, {'connected_gene': 'SIM1', 'score': 0.26}]
chr6	GH06I100416	100416747	100417847	0.31	[{'connected_gene': 'GC06P100411', 'score': 0.44}, {'connected_gene': 'LOC102724406', 'score': 0.34}, {'connected_gene': 'SIM1', 'score': 0.25}]