PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000405617	[[5085719, 5087455]]	[[5085719, 5086796]]
NM_001145115	[[5085719, 5087455]]	[[5085719, 5086796]]

Promoter

Chrom	Start	End	Description
chr6	5085572	5085576	CAGE_peak_2_at_PPP1R3G_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I004717	4717698	4717810	0.34	[{'connected_gene': 'PPP1R3G', 'score': 2.27}, {'connected_gene': 'CDYL', 'score': 0.39}, {'connected_gene': 'LOC101927913', 'score': 0.22}, {'connected_gene': 'GC06P004491', 'score': 0.07}]
chr6	GH06I005080	5080090	5086201	2.15	[{'connected_gene': 'PPP1R3G', 'score': 550.77}, {'connected_gene': 'LYRM4', 'score': 5.07}, {'connected_gene': 'LOC442155', 'score': 0.37}, {'connected_gene': 'LYRM4-AS1', 'score': 0.18}]
chr6	GH06I005090	5090001	5090200	0.31	[{'connected_gene': 'LYRM4', 'score': 6.6}, {'connected_gene': 'GC06P005094', 'score': 0.77}, {'connected_gene': 'PPP1R3G', 'score': 0.44}, {'connected_gene': 'LYRM4-AS1', 'score': 0.17}]
chr6	GH06I005112	5112587	5112736	0.43	[{'connected_gene': 'LYRM4', 'score': 8.14}, {'connected_gene': 'PPP1R3G', 'score': 7.69}, {'connected_gene': 'PIR53269', 'score': 0.44}, {'connected_gene': 'GC06P005094', 'score': 0.37}, {'connected_gene': 'LYRM4-AS1', 'score': 0.14}]
chr6	GH06I005087	5087401	5087942	0.38	[{'connected_gene': 'LYRM4', 'score': 6.26}, {'connected_gene': 'PPP1R3G', 'score': 0.77}, {'connected_gene': 'GC06P005094', 'score': 0.44}, {'connected_gene': 'LYRM4-AS1', 'score': 0.18}]
chr6	GH06I006005	6005481	6009461	2.28	[{'connected_gene': 'NRN1', 'score': 558.9}, {'connected_gene': 'LOC442155', 'score': 9.95}, {'connected_gene': 'PPP1R3G', 'score': 4.86}, {'connected_gene': 'GC06M005970', 'score': 0.77}, {'connected_gene': 'LOC105374898', 'score': 0.39}, {'connected_gene': 'GC06P005986', 'score': 0.34}]
chr6	GH06I005456	5456937	5457468	0.58	[{'connected_gene': 'LOC101927972', 'score': 561.16}, {'connected_gene': 'PPP1R3G', 'score': 4.76}, {'connected_gene': 'GC06P005402', 'score': 0.23}, {'connected_gene': 'FARS2', 'score': 0.08}]
chr6	GH06I005124	5124744	5126405	0.77	[{'connected_gene': 'GC06M005124', 'score': 550.77}, {'connected_gene': 'PPP1R3G', 'score': 7.03}, {'connected_gene': 'PIR53269', 'score': 0.44}, {'connected_gene': 'LYRM4-AS1', 'score': 0.13}, {'connected_gene': 'LYRM4', 'score': 0.12}]
chr6	GH06I005094	5094467	5094636	0.69	[{'connected_gene': 'GC06P005094', 'score': 550.77}, {'connected_gene': 'LYRM4', 'score': 6.87}, {'connected_gene': 'PPP1R3G', 'score': 0.44}, {'connected_gene': 'LYRM4-AS1', 'score': 0.16}]