Visualization of regulatory element with DNMs in transcripts



Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.

Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000372159 [[135468383, 135470499], [135487473, 135487642], [135493716, 135493828], [135501050, 135501132], [135505650, 135505790], [135507427, 135507478], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135545246, 135545788]] [[135470252, 135470499], [135487473, 135487642], [135493716, 135493828], [135501050, 135501132], [135505650, 135505790], [135507427, 135507478], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135545246, 135545636]]
ENST00000372153 [[135469675, 135470499], [135487473, 135487642], [135505650, 135505765], [135507427, 135507478], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135545246, 135545788]] [[135470252, 135470499], [135487473, 135487642], [135505650, 135505765], [135507427, 135507478], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135545246, 135545636]]
ENST00000438527 [[135470146, 135470499], [135487473, 135487642], [135493716, 135493828], [135501050, 135501132], [135505650, 135505790], [135507427, 135507478], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135538608, 135538887]] [[135470252, 135470499], [135487473, 135487642], [135493716, 135493828], [135501050, 135501132], [135505650, 135505790], [135507427, 135507478], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135538608, 135538611]]
ENST00000310532 [[135513249, 135513750], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135545246, 135545788]] [[135513747, 135513750], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135545246, 135545636]]
ENST00000372155 [[135468383, 135470499], [135487473, 135487700]] None
ENST00000480876 [[135533505, 135533745], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135545246, 135545788]] None
ENST00000544003 [[135535722, 135536638], [135537647, 135537723], [135537825, 135538082], [135544956, 135545060], [135545246, 135545403]] [[135536590, 135536638], [135537647, 135537723], [135537825, 135538082], [135544956, 135545058]]
ENST00000482620 [[135536462, 135536638], [135537647, 135537723], [135537825, 135538082], [135545246, 135545788]] None
NM_001322343 [[135468383, 135470499], [135487473, 135487642], [135493716, 135493828], [135501050, 135501132], [135505650, 135505790], [135507427, 135507478], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135538608, 135538713]] [[135470252, 135470499], [135487473, 135487642], [135493716, 135493828], [135501050, 135501132], [135505650, 135505790], [135507427, 135507478], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135538608, 135538611]]
NM_001322342 [[135468383, 135470499], [135487473, 135487642], [135493716, 135493828], [135501050, 135501132], [135505650, 135505790], [135507427, 135507478], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135538758, 135538804]] [[135470252, 135470499], [135487473, 135487642], [135493716, 135493828], [135501050, 135501132], [135505650, 135505790], [135507427, 135507478], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135537941]]
NM_001322341 [[135468383, 135470499], [135487473, 135487642], [135493716, 135493828], [135501050, 135501132], [135505650, 135505790], [135507427, 135507478], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135544956, 135545060], [135545246, 135545788]] [[135470252, 135470499], [135487473, 135487642], [135493716, 135493828], [135501050, 135501132], [135505650, 135505790], [135507427, 135507478], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135544956, 135545058]]
NM_022779 [[135468383, 135470499], [135487473, 135487642], [135493716, 135493828], [135501050, 135501132], [135505650, 135505790], [135507427, 135507478], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135545246, 135545788]] [[135470252, 135470499], [135487473, 135487642], [135493716, 135493828], [135501050, 135501132], [135505650, 135505790], [135507427, 135507478], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135545246, 135545636]]
NR_136309 [[135468383, 135470499], [135487473, 135487642], [135501050, 135501132], [135505650, 135505765], [135507427, 135507478], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135545246, 135545788]] None
NM_001322340 [[135468383, 135470499], [135487473, 135487642], [135505650, 135505765], [135507427, 135507478], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135545246, 135545788]] [[135470252, 135470499], [135487473, 135487642], [135505650, 135505765], [135507427, 135507478], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135545246, 135545636]]
NM_138620 [[135513249, 135513750], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135545246, 135545788]] [[135513747, 135513750], [135517390, 135517450], [135521281, 135521458], [135522209, 135522445], [135523575, 135523682], [135523818, 135523938], [135525620, 135525685], [135526461, 135526503], [135527834, 135527879], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135545246, 135545636]]
NM_001322344 [[135533473, 135533745], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135545246, 135545788]] [[135533688, 135533745], [135534057, 135534122], [135535096, 135535167], [135536594, 135536638], [135537647, 135537723], [135537825, 135538082], [135545246, 135545636]]
Promoter
Chrom Start End Description
chr9 135545323 135545353 CAGE_peak_3_at_DDX31_5end
chr9 135545356 135545378 CAGE_peak_1_at_DDX31_5end
chr9 135545380 135545419 CAGE_peak_2_at_DDX31_5end