PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000422177	[[100956974, 100957386], [100957684, 100958563], [100959620, 100959823], [100961404, 100961494], [100962236, 100962313], [100964951, 100965075]]	[[100958414, 100958563], [100959620, 100959823], [100961404, 100961494], [100962236, 100962313], [100964951, 100964990]]
ENST00000517481	[[100957455, 100958563], [100959620, 100959823], [100961404, 100961494], [100962236, 100962313], [100964707, 100964780], [100964951, 100965057]]	[[100958414, 100958563], [100959620, 100959798]]
ENST00000315322	[[100957936, 100958563], [100959620, 100959823], [100961404, 100961494], [100962236, 100962313], [100964951, 100965084]]	[[100958414, 100958563], [100959620, 100959823], [100961404, 100961494], [100962236, 100962313], [100964951, 100964990]]
ENST00000498704	[[100958033, 100958563], [100959620, 100959823], [100961404, 100961494], [100964951, 100965045]]	[[100958414, 100958563], [100959620, 100959798]]
ENST00000440362	[[100958068, 100958563], [100959620, 100959823], [100961404, 100962313], [100964951, 100965071]]	None
ENST00000437644	[[100958075, 100958563], [100959620, 100959823], [100962236, 100962313], [100964951, 100965058]]	[[100958414, 100958563], [100959620, 100959823], [100962236, 100962313], [100964951, 100964990]]
ENST00000430911	[[100958158, 100958563], [100959620, 100959823], [100961404, 100961494], [100962236, 100962344], [100964951, 100965078]]	[[100962269, 100962344], [100964951, 100964990]]
ENST00000495166	[[100958352, 100958563], [100959620, 100959823], [100964951, 100965104]]	None
ENST00000468833	[[100958773, 100959823], [100964951, 100965071]]	None
ENST00000485695	[[100959105, 100959823], [100961404, 100961494], [100964951, 100965066]]	None
NM_001287525	[[100956647, 100958563], [100959620, 100959823], [100961404, 100961494], [100962236, 100962313], [100964707, 100964780], [100964951, 100965104]]	[[100958414, 100958563], [100959620, 100959798]]
NM_001130821	[[100956647, 100958563], [100959620, 100959823], [100961404, 100961494], [100962236, 100962344], [100964951, 100965104]]	[[100958414, 100958563], [100959620, 100959798]]
NM_022777	[[100956647, 100958563], [100959620, 100959823], [100961404, 100961494], [100962236, 100962313], [100964951, 100965104]]	[[100958414, 100958563], [100959620, 100959823], [100961404, 100961494], [100962236, 100962313], [100964951, 100964990]]
NM_001130820	[[100956647, 100958563], [100959620, 100959823], [100962236, 100962313], [100964951, 100965104]]	[[100958414, 100958563], [100959620, 100959823], [100962236, 100962313], [100964951, 100964990]]
NM_001130822	[[100956647, 100958563], [100959620, 100959823], [100961404, 100961494], [100964951, 100965104]]	[[100958414, 100958563], [100959620, 100959798]]
NM_001287526	[[100956647, 100958563], [100959620, 100959823], [100964951, 100965104]]	[[100958414, 100958563], [100959620, 100959798]]

Promoter

Chrom	Start	End	Description
chr7	100965011	100965108	CAGE_peak_1_at_RABL5_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr7	GH07I101321	101321151	101322742	1.98	[{'connected_gene': 'IFT22', 'score': 550.77}, {'connected_gene': 'LOC101927746', 'score': 36.31}, {'connected_gene': 'SRRT', 'score': 15.42}, {'connected_gene': 'PCOLCE-AS1', 'score': 12.33}, {'connected_gene': 'MEPCE', 'score': 10.31}, {'connected_gene': 'GIGYF1', 'score': 9.91}, {'connected_gene': 'COL26A1', 'score': 0.26}]
chr7	GH07I101319	101319049	101319108	0.5	[{'connected_gene': 'IFT22', 'score': 550.77}, {'connected_gene': 'PIR42767', 'score': 0.77}, {'connected_gene': 'LOC101927746', 'score': 0.39}]
chr7	GH07I100581	100581732	100587601	2.31	[{'connected_gene': 'FBXO24', 'score': 562.24}, {'connected_gene': 'LRCH4', 'score': 561.01}, {'connected_gene': 'ZSCAN25', 'score': 44.29}, {'connected_gene': 'AP4M1', 'score': 42.85}, {'connected_gene': 'ZSCAN21', 'score': 42.71}, {'connected_gene': 'SRRT', 'score': 37.23}, {'connected_gene': 'SAP25', 'score': 30.69}, {'connected_gene': 'MEPCE', 'score': 29.79}, {'connected_gene': 'PPP1R35', 'score': 29.25}, {'connected_gene': 'GIGYF1', 'score': 27.33}, {'connected_gene': 'TRIM4', 'score': 26.8}, {'connected_gene': 'ZNF3', 'score': 20.21}, {'connected_gene': 'STAG3L5P', 'score': 18.86}, {'connected_gene': 'MBLAC1', 'score': 14.65}, {'connected_gene': 'TMEM225B', 'score': 12.98}, {'connected_gene': 'AGFG2', 'score': 11.66}, {'connected_gene': 'MOSPD3', 'score': 11.61}, {'connected_gene': 'C7orf43', 'score': 11.01}, {'connected_gene': 'GPC2', 'score': 10.79}, {'connected_gene': 'IFT22', 'score': 10.68}, {'connected_gene': 'ZKSCAN1', 'score': 10.36}, {'connected_gene': 'TAF6', 'score': 10.16}, {'connected_gene': 'PCOLCE-AS1', 'score': 10.11}, {'connected_gene': 'ENSG00000242798', 'score': 9.83}, {'connected_gene': 'CNPY4', 'score': 9.67}]
chr7	GH07I101879	101879689	101885999	1.81	[{'connected_gene': 'FAM185A', 'score': 13.72}, {'connected_gene': 'IFT22', 'score': 10.68}, {'connected_gene': 'ENSG00000213385', 'score': 9.93}, {'connected_gene': 'CUX1', 'score': 3.65}, {'connected_gene': 'SH2B2', 'score': 2.16}, {'connected_gene': 'GC07P101859', 'score': 0.34}, {'connected_gene': 'ENSG00000272219', 'score': 0.18}]
chr7	GH07I101352	101352420	101352689	0.98	[{'connected_gene': 'LOC101927746', 'score': 9.74}, {'connected_gene': 'COL26A1', 'score': 0.39}, {'connected_gene': 'IFT22', 'score': 0.29}]
chr7	GH07I101315	101315340	101315509	0.49	[{'connected_gene': 'PIR47287', 'score': 550.77}, {'connected_gene': 'PIR32353', 'score': 550.77}, {'connected_gene': 'PIR42767', 'score': 550.77}, {'connected_gene': 'LOC101927746', 'score': 0.44}, {'connected_gene': 'IFT22', 'score': 0.44}]