PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr10	14996023	14996069	CAGE_peak_1_at_DCLRE1C_5end
chr10	14996070	14996102	CAGE_peak_2_at_DCLRE1C_5end
chr10	14996321	14996359	CAGE_peak_4_at_DCLRE1C_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I014558	14558380	14574692	2.19	[{'connected_gene': 'FAM107B', 'score': 557.61}, {'connected_gene': 'HSPA14', 'score': 12.61}, {'connected_gene': 'CDNF', 'score': 10.57}, {'connected_gene': 'LOC105376429', 'score': 10.57}, {'connected_gene': 'DCLRE1C', 'score': 1.24}, {'connected_gene': 'GC10M014524', 'score': 0.28}]
chr10	GH10I014647	14647074	14650208	1.54	[{'connected_gene': 'FAM107B', 'score': 33.67}, {'connected_gene': 'C10orf111', 'score': 13.44}, {'connected_gene': 'HSPA14', 'score': 2.23}, {'connected_gene': 'CDNF', 'score': 1.74}, {'connected_gene': 'DCLRE1C', 'score': 1.28}, {'connected_gene': 'RPP38', 'score': 1.27}, {'connected_gene': 'LOC105376429', 'score': 0.77}, {'connected_gene': 'GC10M014524', 'score': 0.13}]
chr10	GH10I014913	14913591	14913885	0.22	[{'connected_gene': 'SUV39H2', 'score': 3.74}, {'connected_gene': 'HSPA14', 'score': 2.05}, {'connected_gene': 'PIR60156', 'score': 0.77}, {'connected_gene': 'GC10P014933', 'score': 0.37}, {'connected_gene': 'DCLRE1C', 'score': 0.26}]
chr10	GH10I014184	14184413	14186761	1.23	[{'connected_gene': 'DCLRE1C', 'score': 41.31}, {'connected_gene': 'PRPF18', 'score': 35.8}, {'connected_gene': 'ENSG00000239665', 'score': 32.31}, {'connected_gene': 'ENSG00000273474', 'score': 31.22}, {'connected_gene': 'HSPA14', 'score': 23.28}, {'connected_gene': 'SEPHS1', 'score': 22.77}, {'connected_gene': 'RPP38', 'score': 20.46}, {'connected_gene': 'GC10P014189', 'score': 0.77}, {'connected_gene': 'LOC101928453', 'score': 0.14}, {'connected_gene': 'FRMD4A', 'score': 0.06}]
chr10	GH10I014950	14950502	14955375	2.09	[{'connected_gene': 'DCLRE1C', 'score': 576.17}, {'connected_gene': 'MEIG1', 'score': 550.77}, {'connected_gene': 'RPP38', 'score': 10.25}, {'connected_gene': 'GC10M014933', 'score': 0.44}, {'connected_gene': 'GC10P014933', 'score': 0.37}]
chr10	GH10I015434	15434201	15434800	0.98	[{'connected_gene': 'DCLRE1C', 'score': 75.48}, {'connected_gene': 'RPP38', 'score': 37.62}, {'connected_gene': 'HSPA14', 'score': 23.45}, {'connected_gene': 'MINDY3', 'score': 12.15}, {'connected_gene': 'FAM171A1', 'score': 7.34}, {'connected_gene': 'GC10P015448', 'score': 0.39}]
chr10	GH10I014583	14582030	14582330	0.77	[{'connected_gene': 'DCLRE1C', 'score': 2.33}, {'connected_gene': 'GC10M014524', 'score': 0.23}, {'connected_gene': 'LOC105376429', 'score': 0.19}, {'connected_gene': 'FAM107B', 'score': 0.08}]
chr10	GH10I014925	14925357	14927380	0.76	[{'connected_gene': 'HSPA14', 'score': 5.47}, {'connected_gene': 'GC10P014933', 'score': 0.44}, {'connected_gene': 'PIR60156', 'score': 0.37}, {'connected_gene': 'DCLRE1C', 'score': 0.31}]
chr10	GH10I014657	14657085	14661599	1.51	[{'connected_gene': 'C10orf111', 'score': 1.83}, {'connected_gene': 'DCLRE1C', 'score': 1.2}, {'connected_gene': 'LOC105376428', 'score': 0.77}, {'connected_gene': 'GC10M014663', 'score': 0.77}, {'connected_gene': 'LOC105376429', 'score': 0.44}, {'connected_gene': 'FAM107B', 'score': 0.13}]
chr10	GH10I014875	14875634	14880653	2.07	[{'connected_gene': 'ENSG00000272853', 'score': 550.77}, {'connected_gene': 'SUV39H2', 'score': 550.77}, {'connected_gene': 'DCLRE1C', 'score': 43.4}, {'connected_gene': 'RPP38', 'score': 27.69}, {'connected_gene': 'HSPA14', 'score': 21.12}, {'connected_gene': 'CDNF', 'score': 10.46}, {'connected_gene': 'LOC100421372', 'score': 0.28}]
chr10	GH10I014904	14904402	14904511	0.54	[{'connected_gene': 'GC10M014904', 'score': 550.77}, {'connected_gene': 'SUV39H2', 'score': 11.64}, {'connected_gene': 'HSPA14', 'score': 10.88}, {'connected_gene': 'CDNF', 'score': 10.88}, {'connected_gene': 'PIR33358', 'score': 0.34}, {'connected_gene': 'DCLRE1C', 'score': 0.25}]
chr10	GH10I014958	14958801	14961308	2.07	[{'connected_gene': 'GC10M014933', 'score': 550.77}, {'connected_gene': 'MEIG1', 'score': 550.44}, {'connected_gene': 'DCLRE1C', 'score': 27.48}, {'connected_gene': 'HSPA14', 'score': 22.33}, {'connected_gene': 'RPP38', 'score': 12.84}, {'connected_gene': 'SUV39H2', 'score': 10.89}, {'connected_gene': 'CDNF', 'score': 10.05}, {'connected_gene': 'OR7E110P', 'score': 0.31}]
chr10	GH10I014939	14939122	14939271	0.59	[{'connected_gene': 'GC10P014933', 'score': 0.44}, {'connected_gene': 'DCLRE1C', 'score': 0.37}, {'connected_gene': 'MEIG1', 'score': 0.37}, {'connected_gene': 'GC10M014933', 'score': 0.34}]
chr10	GH10I014836	14836504	14839936	2.05	[{'connected_gene': 'ENSG00000284024', 'score': 550.77}, {'connected_gene': 'HSPA14', 'score': 550.77}, {'connected_gene': 'CDNF', 'score': 550.77}, {'connected_gene': 'DCLRE1C', 'score': 12.91}, {'connected_gene': 'RPP38', 'score': 10.21}]
chr10	GH10I015083	15083796	15085400	1.01	[{'connected_gene': 'PIR44298', 'score': 550.77}, {'connected_gene': 'C10orf111', 'score': 12.54}, {'connected_gene': 'DCLRE1C', 'score': 12.25}, {'connected_gene': 'ACBD7', 'score': 8.67}, {'connected_gene': 'RPP38', 'score': 5.14}, {'connected_gene': 'DCLRE1CP1', 'score': 0.39}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000378289	[[14939357, 14941311], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978592], [14981808, 14981868], [14987103, 14987188], [14991034, 14991086], [14995900, 14996431]]	[[14941162, 14941311], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978592], [14981808, 14981868], [14987103, 14987188], [14991034, 14991086], [14995900, 14996009]]
ENST00000453695	[[14948896, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978592], [14981808, 14981868], [14987103, 14987188], [14991034, 14991086], [14995900, 14996094]]	[[14950406, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978538]]
ENST00000378246	[[14949877, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14981808, 14981868], [14987103, 14987188], [14991034, 14991086], [14995900, 14996094]]	[[14950406, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14981808, 14981825]]
ENST00000357717	[[14950164, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14981808, 14981868], [14991034, 14991086], [14995900, 14996057]]	[[14950406, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14981808, 14981825]]
ENST00000378278	[[14950169, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978592], [14981808, 14981868], [14987103, 14987188], [14991034, 14991086], [14995900, 14996047]]	[[14950406, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978592], [14981808, 14981868], [14987103, 14987188], [14991034, 14991086], [14995900, 14996009]]
ENST00000396817	[[14950169, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978592], [14981808, 14981868], [14984112, 14984434], [14987103, 14987188], [14989523, 14989608], [14991034, 14991086], [14995900, 14996047]]	[[14950406, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978538]]
ENST00000378254	[[14950169, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978592], [14981808, 14981868], [14987103, 14987188], [14987433, 14987564], [14991034, 14991086], [14995900, 14996047]]	[[14950406, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978538]]
ENST00000378255	[[14950169, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978592], [14981808, 14981868], [14984112, 14984434], [14987103, 14987188], [14987433, 14987564], [14991034, 14991086], [14995900, 14996047]]	[[14950406, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978538]]
ENST00000378249	[[14950169, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14981808, 14981868], [14987103, 14987188], [14995900, 14996047]]	[[14950406, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14981808, 14981825]]
ENST00000378258	[[14950169, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978592], [14981808, 14981868], [14987103, 14987188], [14989523, 14989608], [14991034, 14991086], [14995900, 14996071]]	[[14950406, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978538]]
ENST00000378242	[[14950186, 14951329], [14961736, 14961831], [14964979, 14965674]]	[[14950406, 14951329], [14961736, 14961831], [14964979, 14964999]]
ENST00000492201	[[14950740, 14951329], [14961736, 14961831], [14962378, 14962443], [14964979, 14965068], [14968841, 14968896], [14970014, 14970081]]	None
ENST00000489845	[[14951168, 14951329], [14953188, 14953321]]	None
ENST00000489161	[[14961794, 14961831], [14964979, 14965068], [14970014, 14970061]]	None
ENST00000418843	[[14970141, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977522], [14978536, 14978592], [14981808, 14981868], [14987103, 14987188], [14987433, 14987564], [14991034, 14991086], [14995900, 14996030]]	[[14970141, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977487]]
ENST00000378241	[[14976443, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978592], [14981808, 14981868], [14984112, 14984239], [14987103, 14987188], [14989523, 14989608], [14991034, 14991086], [14995900, 14996017]]	[[14976443, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978538]]
ENST00000456122	[[14976721, 14976774], [14977461, 14977563], [14981808, 14981868], [14984112, 14984434], [14987103, 14987188], [14989523, 14989608], [14991034, 14991086], [14995900, 14996018]]	[[14976721, 14976774], [14977461, 14977563], [14981808, 14981825]]
NM_001033858	[[14946609, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978592], [14981808, 14981868], [14984112, 14984434], [14987103, 14987188], [14989523, 14989608], [14991034, 14991086], [14995900, 14996431]]	[[14950406, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978538]]
NR_110297	[[14946609, 14951329], [14953188, 14953329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978592], [14981808, 14981868], [14984112, 14984239], [14987103, 14987188], [14989523, 14989608], [14991034, 14991086], [14995900, 14996431]]	None
NM_001033857	[[14946609, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978592], [14981808, 14981868], [14987103, 14987188], [14989523, 14989608], [14991034, 14991086], [14995900, 14996431]]	[[14950406, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978538]]
NM_001289079	[[14946609, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978592], [14981808, 14981868], [14984112, 14984434], [14987103, 14987188], [14987433, 14987564], [14991034, 14991086], [14995900, 14996431]]	[[14950406, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978538]]
NM_001289077	[[14946609, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978592], [14981808, 14981868], [14987103, 14987188], [14987433, 14987564], [14991034, 14991086], [14995900, 14996431]]	[[14950406, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978538]]
NM_001033855	[[14946609, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978592], [14981808, 14981868], [14987103, 14987188], [14991034, 14991086], [14995900, 14996431]]	[[14950406, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14978536, 14978592], [14981808, 14981868], [14987103, 14987188], [14991034, 14991086], [14995900, 14996009]]
NM_022487	[[14946609, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14981808, 14981868], [14987103, 14987188], [14991034, 14991086], [14995900, 14996431]]	[[14950406, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14981808, 14981825]]
NM_001289076	[[14946609, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14981808, 14981868], [14991034, 14991086], [14995900, 14996431]]	[[14950406, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14981808, 14981825]]
NM_001289078	[[14946609, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14981808, 14981868], [14987103, 14987188], [14995900, 14996431]]	[[14950406, 14951329], [14961736, 14961831], [14964979, 14965068], [14968841, 14968896], [14970014, 14970151], [14974852, 14974954], [14976378, 14976519], [14976701, 14976774], [14977461, 14977563], [14981808, 14981825]]