PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000543788	[[96075003, 96075221], [96094390, 96094475], [96097533, 96097631], [96098364, 96098493], [96099495, 96099677], [96100032, 96100104], [96100189, 96100253], [96101429, 96101502], [96104171, 96104272], [96104609, 96104690], [96106181, 96106313], [96109006, 96109135], [96109869, 96110045], [96112066, 96112160], [96112652, 96112733]]	[[96075203, 96075221], [96094390, 96094475], [96097533, 96097631], [96098364, 96098493], [96099495, 96099677], [96100032, 96100104], [96100189, 96100253], [96101429, 96101502], [96104171, 96104272], [96104609, 96104690], [96106181, 96106313], [96109006, 96109135], [96109869, 96110045], [96112066, 96112160], [96112652, 96112724]]
ENST00000371361	[[96092982, 96094062], [96094390, 96094475], [96097533, 96097631], [96098364, 96098493], [96099495, 96099677], [96100032, 96100104], [96100189, 96100253], [96101429, 96101502], [96104171, 96104272], [96104609, 96104690], [96106181, 96106313], [96109006, 96109135], [96109869, 96110045], [96112066, 96112160], [96112652, 96112814], [96114719, 96114850], [96116291, 96116348], [96116930, 96117088], [96117839, 96117972], [96121421, 96121629], [96122586, 96122696]]	[[96093933, 96094062], [96094390, 96094475], [96097533, 96097631], [96098364, 96098493], [96099495, 96099677], [96100032, 96100104], [96100189, 96100253], [96101429, 96101502], [96104171, 96104272], [96104609, 96104690], [96106181, 96106313], [96109006, 96109135], [96109869, 96110045], [96112066, 96112160], [96112652, 96112814], [96114719, 96114850], [96116291, 96116348], [96116930, 96117088], [96117839, 96117972], [96121421, 96121629], [96122586, 96122595]]
ENST00000371350	[[96092988, 96094062], [96094390, 96094475], [96097533, 96097631], [96098364, 96098493], [96099495, 96099677], [96100032, 96100104], [96100189, 96100253], [96101429, 96101502], [96104171, 96104272], [96104609, 96104690], [96106181, 96106313], [96109006, 96109135], [96109869, 96110045], [96112066, 96112160], [96112652, 96112814], [96114719, 96114850], [96116291, 96116348], [96116930, 96117088], [96117839, 96117972], [96121421, 96121629], [96121702, 96121711]]	[[96093933, 96094062], [96094390, 96094475], [96097533, 96097631], [96098364, 96098493], [96099495, 96099677], [96100032, 96100104], [96100189, 96100253], [96101429, 96101502], [96104171, 96104272], [96104609, 96104690], [96106181, 96106313], [96109006, 96109135], [96109869, 96110045], [96112066, 96112160], [96112652, 96112814], [96114719, 96114850], [96116291, 96116348], [96116930, 96117088], [96117839, 96117972], [96121421, 96121629], [96121702, 96121711]]
ENST00000463649	[[96106232, 96106313], [96109006, 96109135], [96109869, 96110045], [96112066, 96112160], [96112652, 96112814], [96114719, 96114850], [96116291, 96116348], [96116930, 96117972], [96121421, 96121629], [96122586, 96122696]]	None
ENST00000461562	[[96121080, 96121318], [96121421, 96121629], [96122586, 96122716]]	None
NM_022451	[[96092982, 96094062], [96094390, 96094475], [96097533, 96097631], [96098364, 96098493], [96099495, 96099677], [96100032, 96100104], [96100189, 96100253], [96101429, 96101502], [96104171, 96104272], [96104609, 96104690], [96106181, 96106313], [96109006, 96109135], [96109869, 96110045], [96112066, 96112160], [96112652, 96112814], [96114719, 96114850], [96116291, 96116348], [96116930, 96117088], [96117839, 96117972], [96121421, 96121629], [96122586, 96122733]]	[[96093933, 96094062], [96094390, 96094475], [96097533, 96097631], [96098364, 96098493], [96099495, 96099677], [96100032, 96100104], [96100189, 96100253], [96101429, 96101502], [96104171, 96104272], [96104609, 96104690], [96106181, 96106313], [96109006, 96109135], [96109869, 96110045], [96112066, 96112160], [96112652, 96112814], [96114719, 96114850], [96116291, 96116348], [96116930, 96117088], [96117839, 96117972], [96121421, 96121629], [96122586, 96122595]]

Promoter

Chrom	Start	End	Description
chr10	96122645	96122675	CAGE_peak_2_at_NOC3L_5end
chr10	96122682	96122730	CAGE_peak_1_at_NOC3L_5end
chr10	96122739	96122750	CAGE_peak_3_at_NOC3L_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I095320	95320595	95323391	0.38	[{'connected_gene': 'PDLIM1', 'score': 15.78}, {'connected_gene': 'NOC3L', 'score': 12.07}, {'connected_gene': 'TCTN3', 'score': 11.67}, {'connected_gene': 'ZNF518A', 'score': 10.38}, {'connected_gene': 'GC10M095392', 'score': 0.19}, {'connected_gene': 'SORBS1', 'score': 0.07}]
chr10	GH10I094115	94115884	94116013	0.52	[{'connected_gene': 'NOC3L', 'score': 12.06}, {'connected_gene': 'RPL17P34', 'score': 10.7}, {'connected_gene': 'ENSG00000231575', 'score': 0.44}, {'connected_gene': 'HDAC1P1', 'score': 0.34}, {'connected_gene': 'PLCE1', 'score': 0.13}]
chr10	GH10I094383	94383640	94383816	0.68	[{'connected_gene': 'NOC3L', 'score': 7.76}, {'connected_gene': 'TBC1D12', 'score': 5.24}]
chr10	GH10I094444	94444404	94444553	0.65	[{'connected_gene': 'NOC3L', 'score': 6.22}, {'connected_gene': 'PIR44069', 'score': 0.39}, {'connected_gene': 'TBC1D12', 'score': 0.26}]
chr10	GH10I094343	94343938	94345617	0.59	[{'connected_gene': 'NOC3L', 'score': 16.12}, {'connected_gene': 'CYP2C19', 'score': 6.75}, {'connected_gene': 'PIR55864', 'score': 0.37}, {'connected_gene': 'ENSG00000273450', 'score': 0.31}]
chr10	GH10I094361	94361242	94363573	2.08	[{'connected_gene': 'NOC3L', 'score': 578.21}, {'connected_gene': 'PIR55864', 'score': 550.77}, {'connected_gene': 'ENSG00000273450', 'score': 30.67}, {'connected_gene': 'FRA10AC1', 'score': 14.79}, {'connected_gene': 'PDE6C', 'score': 13.89}, {'connected_gene': 'PIPSL', 'score': 11.87}, {'connected_gene': 'PLCE1-AS1', 'score': 9.92}, {'connected_gene': 'PLCE1', 'score': 5.42}]
chr10	GH10I094212	94212524	94214841	0.88	[{'connected_gene': 'NOC3L', 'score': 6.66}, {'connected_gene': 'MTND4P19', 'score': 4.76}, {'connected_gene': 'HELLS', 'score': 4.36}, {'connected_gene': 'CYP2C9', 'score': 3.95}, {'connected_gene': 'ENSG00000228553', 'score': 0.39}, {'connected_gene': 'RNU6-657P', 'score': 0.22}, {'connected_gene': 'GC10M094156', 'score': 0.22}, {'connected_gene': 'PLCE1', 'score': 0.08}]
chr10	GH10I094210	94210220	94211423	0.63	[{'connected_gene': 'NOC3L', 'score': 4.57}, {'connected_gene': 'MTND4P19', 'score': 4.02}, {'connected_gene': 'ENSG00000228553', 'score': 0.37}, {'connected_gene': 'RNU6-657P', 'score': 0.22}, {'connected_gene': 'GC10M094156', 'score': 0.22}, {'connected_gene': 'PLCE1', 'score': 0.08}]
chr10	GH10I094273	94273893	94276973	0.46	[{'connected_gene': 'NOC3L', 'score': 6.76}, {'connected_gene': 'PLCE1-AS1', 'score': 5.08}, {'connected_gene': 'PLCE1', 'score': 4.9}, {'connected_gene': 'ACSM6', 'score': 4.03}, {'connected_gene': 'ENSG00000228553', 'score': 0.25}]
chr10	GH10I094310	94310128	94311184	0.74	[{'connected_gene': 'NOC3L', 'score': 13.2}, {'connected_gene': 'PLCE1-AS1', 'score': 6.12}, {'connected_gene': 'ENSG00000273450', 'score': 0.77}, {'connected_gene': 'PLCE1', 'score': 0.06}]
chr10	GH10I094291	94291812	94294376	0.43	[{'connected_gene': 'NOC3L', 'score': 11.24}, {'connected_gene': 'PLCE1-AS1', 'score': 7.4}, {'connected_gene': 'SLC35G1', 'score': 4.14}, {'connected_gene': 'ENSG00000273450', 'score': 0.34}, {'connected_gene': 'PLCE1', 'score': 0.06}]
chr10	GH10I094357	94357775	94359294	0.96	[{'connected_gene': 'NOC3L', 'score': 6.13}, {'connected_gene': 'PIR55864', 'score': 0.77}, {'connected_gene': 'ENSG00000273450', 'score': 0.26}]
chr10	GH10I093498	93498027	93498900	0.77	[{'connected_gene': 'CEP55', 'score': 561.72}, {'connected_gene': 'RPL17P34', 'score': 13.62}, {'connected_gene': 'PDE6C', 'score': 12.8}, {'connected_gene': 'NOC3L', 'score': 11.78}, {'connected_gene': 'RNA5SP323', 'score': 0.39}, {'connected_gene': 'GC10M093511', 'score': 0.39}]
chr10	GH10I093990	93990648	93995400	1.57	[{'connected_gene': 'PLCE1', 'score': 565.38}, {'connected_gene': 'RPL17P34', 'score': 22.04}, {'connected_gene': 'ENSG00000273450', 'score': 19.4}, {'connected_gene': 'NOC3L', 'score': 12.09}, {'connected_gene': 'LOC105378438', 'score': 0.44}]
chr10	GH10I094381	94381000	94381401	0.66	[{'connected_gene': 'HELLS', 'score': 10.91}, {'connected_gene': 'PDE6C', 'score': 10.52}, {'connected_gene': 'CYP2C19', 'score': 8.21}, {'connected_gene': 'NOC3L', 'score': 0.37}, {'connected_gene': 'TBC1D12', 'score': 0.34}]
chr10	GH10I094543	94543724	94547408	1.98	[{'connected_gene': 'HELLS', 'score': 564.66}, {'connected_gene': 'ENSG00000273450', 'score': 11.44}, {'connected_gene': 'PDE6C', 'score': 9.67}, {'connected_gene': 'ACSM6', 'score': 8.4}, {'connected_gene': 'NOC3L', 'score': 7.5}, {'connected_gene': 'GC10P094552', 'score': 0.44}]
chr10	GH10I094397	94397367	94398459	0.88	[{'connected_gene': 'HELLS', 'score': 14.18}, {'connected_gene': 'TBC1D12', 'score': 0.77}, {'connected_gene': 'NOC3L', 'score': 0.29}]
chr10	GH10I094428	94428650	94430243	0.58	[{'connected_gene': 'HELLS', 'score': 14.23}, {'connected_gene': 'ACSM6', 'score': 13.14}, {'connected_gene': 'NOC3L', 'score': 10.98}, {'connected_gene': 'TBC1D12', 'score': 0.31}, {'connected_gene': 'PIR44069', 'score': 0.31}]
chr10	GH10I094401	94401474	94405001	2.04	[{'connected_gene': 'TBC1D12', 'score': 550.77}, {'connected_gene': 'NOC3L', 'score': 31.32}, {'connected_gene': 'HELLS', 'score': 20.17}, {'connected_gene': 'PDE6C', 'score': 11.04}, {'connected_gene': 'PIR44069', 'score': 0.22}]
chr10	GH10I094370	94370657	94370775	0.25	[{'connected_gene': 'TBC1D12', 'score': 5.21}, {'connected_gene': 'NOC3L', 'score': 0.44}]
chr10	GH10I094679	94679461	94684898	1.36	[{'connected_gene': 'CYP2C18', 'score': 550.77}, {'connected_gene': 'ACSM6', 'score': 27.79}, {'connected_gene': 'CYP2C19', 'score': 14.98}, {'connected_gene': 'MTND4P19', 'score': 5.84}, {'connected_gene': 'NOC3L', 'score': 5.34}, {'connected_gene': 'CYP2C9', 'score': 4.69}, {'connected_gene': 'CTBP2P2', 'score': 0.29}]
chr10	GH10I093701	93701338	93703626	2.14	[{'connected_gene': 'FRA10AC1', 'score': 625.13}, {'connected_gene': 'RPL17P34', 'score': 85.97}, {'connected_gene': 'NOC3L', 'score': 82.21}, {'connected_gene': 'PDE6C', 'score': 74.44}, {'connected_gene': 'ENSG00000273450', 'score': 31.65}, {'connected_gene': 'MYOF', 'score': 12.54}, {'connected_gene': 'HELLS', 'score': 10.7}]
chr10	GH10I093511	93511424	93511553	0.54	[{'connected_gene': 'RNA5SP323', 'score': 550.77}, {'connected_gene': 'GC10M093511', 'score': 550.77}, {'connected_gene': 'PDE6C', 'score': 11.81}, {'connected_gene': 'NOC3L', 'score': 10.5}, {'connected_gene': 'RPL17P34', 'score': 10.11}, {'connected_gene': 'CEP55', 'score': 0.39}, {'connected_gene': 'GC10M093549', 'score': 0.28}]
chr10	GH10I094320	94320424	94320573	0.59	[{'connected_gene': 'ENSG00000273450', 'score': 0.44}, {'connected_gene': 'NOC3L', 'score': 0.26}, {'connected_gene': 'PIR55864', 'score': 0.26}, {'connected_gene': 'PLCE1', 'score': 0.05}]
chr10	GH10I094314	94314840	94317058	0.83	[{'connected_gene': 'ENSG00000273450', 'score': 550.77}, {'connected_gene': 'PLCE1-AS1', 'score': 14.48}, {'connected_gene': 'CYP2C8', 'score': 4.74}, {'connected_gene': 'NOC3L', 'score': 0.25}, {'connected_gene': 'PIR55864', 'score': 0.25}, {'connected_gene': 'PLCE1', 'score': 0.05}]