Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000373795 [[29474254, 29475738], [29476614, 29476704], [29481207, 29481422], [29485885, 29485998], [29486886, 29487029], [29508157, 29508499]] [[29474921, 29475738], [29476614, 29476704], [29481207, 29481422], [29485885, 29485998], [29486886, 29487029], [29508157, 29508264]]
ENST00000546138 [[29474656, 29475738], [29485885, 29485998], [29486886, 29487029], [29508157, 29508410]] [[29475624, 29475738], [29485885, 29485998], [29486886, 29487029], [29508157, 29508264]]
ENST00000466448 [[29475182, 29475738], [29481207, 29481422], [29485885, 29485998], [29486886, 29487029], [29508157, 29508394]] None
ENST00000605204 [[29481247, 29481422], [29485885, 29485998], [29486375, 29486603], [29486886, 29487029], [29492401, 29492576], [29493240, 29493424], [29495014, 29495150], [29508157, 29508402]] [[29492520, 29492576], [29493240, 29493424], [29495014, 29495150], [29508157, 29508264]]
ENST00000472353 [[29486893, 29487029], [29492401, 29492576], [29493240, 29493424], [29495014, 29495151]] None
ENST00000497015 [[29481208, 29481422], [29485885, 29485998], [29486886, 29487075]] None
ENST00000477193 [[29481383, 29481422], [29485885, 29486052]] None
ENST00000489898 [[29485895, 29485998], [29486375, 29486570], [29486886, 29486981]] None
NM_005626 [[29474249, 29475738], [29476614, 29476704], [29481207, 29481422], [29485885, 29485998], [29486886, 29487029], [29508157, 29508637]] [[29474921, 29475738], [29476614, 29476704], [29481207, 29481422], [29485885, 29485998], [29486886, 29487029], [29508157, 29508264]]
Promoter
Chrom Start End Description
chr1 29486938 29486952 CAGE_peak_6_at_SRSF4_5end
chr1 29508276 29508287 CAGE_peak_5_at_SRSF4_5end
chr1 29508321 29508444 CAGE_peak_1_at_SRSF4_5end
chr1 29508469 29508479 CAGE_peak_3_at_SRSF4_5end
chr1 29508500 29508524 CAGE_peak_2_at_SRSF4_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr1 GH01I028578 28578949 28583451 1.62 [{'connected_gene': 'SNHG12', 'score': 636.77}, {'connected_gene': 'GC01M028625', 'score': 550.77}, {'connected_gene': 'GC01M028628', 'score': 550.77}, {'connected_gene': 'SNORA44', 'score': 550.77}, {'connected_gene': 'PIR59489', 'score': 550.77}, {'connected_gene': 'SNORA16A', 'score': 550.77}, {'connected_gene': 'SNORA61', 'score': 550.77}, {'connected_gene': 'GC01M028623', 'score': 550.77}, {'connected_gene': 'GC01M028618', 'score': 550.77}, {'connected_gene': 'GC01M028624', 'score': 550.77}, {'connected_gene': 'GC01M028612', 'score': 550.77}, {'connected_gene': 'GC01M028584', 'score': 550.77}, {'connected_gene': 'SRSF4', 'score': 125.01}, {'connected_gene': 'GMEB1', 'score': 104.04}, {'connected_gene': 'TRNAU1AP', 'score': 96.1}, {'connected_gene': 'YTHDF2', 'score': 78.44}, {'connected_gene': 'PHACTR4', 'score': 46.71}, {'connected_gene': 'ENSG00000231344', 'score': 44.9}, {'connected_gene': 'SNORA73B', 'score': 39.77}, {'connected_gene': 'RCC1', 'score': 37.74}, {'connected_gene': 'FAM76A', 'score': 36.62}, {'connected_gene': 'SNHG3', 'score': 29.57}, {'connected_gene': 'ENSG00000237934', 'score': 27.75}, {'connected_gene': 'EYA3', 'score': 18.19}, {'connected_gene': 'PPP1R8', 'score': 15.28}, {'connected_gene': 'TMEM200B', 'score': 14.25}, {'connected_gene': 'TAF12', 'score': 13.52}, {'connected_gene': 'RAB42', 'score': 10.92}, {'connected_gene': 'DNAJC8', 'score': 10.33}, {'connected_gene': 'AHDC1', 'score': 10.17}]
chr1 GH01I028258 28258097 28261839 2.29 [{'connected_gene': 'SESN2', 'score': 550.77}, {'connected_gene': 'SRSF4', 'score': 52.3}, {'connected_gene': 'SNHG12', 'score': 44.99}, {'connected_gene': 'TRNAU1AP', 'score': 38.87}, {'connected_gene': 'GMEB1', 'score': 38.66}, {'connected_gene': 'YTHDF2', 'score': 33.89}, {'connected_gene': 'PHACTR4', 'score': 30.71}, {'connected_gene': 'DNAJC8', 'score': 29.52}, {'connected_gene': 'ACTG1P20', 'score': 25.22}, {'connected_gene': 'ENSG00000270605', 'score': 24.11}, {'connected_gene': 'MAP3K6', 'score': 23.27}, {'connected_gene': 'FAM76A', 'score': 21.37}, {'connected_gene': 'SNORA73B', 'score': 20.91}, {'connected_gene': 'PPP1R8', 'score': 20.09}, {'connected_gene': 'EYA3', 'score': 19.95}, {'connected_gene': 'RCC1', 'score': 17.98}, {'connected_gene': 'AHDC1', 'score': 13.39}, {'connected_gene': 'SNHG3', 'score': 12.47}, {'connected_gene': 'ENSG00000231344', 'score': 11.4}, {'connected_gene': 'ENSG00000237934', 'score': 11.03}, {'connected_gene': 'ATP5IF1', 'score': 11.03}, {'connected_gene': 'WASF2', 'score': 10.4}, {'connected_gene': 'TMEM200B', 'score': 9.85}, {'connected_gene': 'TMEM222', 'score': 9.82}, {'connected_gene': 'PTAFR', 'score': 6.12}, {'connected_gene': 'RPA2', 'score': 5.36}, {'connected_gene': 'MED18', 'score': 0.2}]
chr1 GH01I028641 28641744 28645076 2.31 [{'connected_gene': 'TAF12', 'score': 550.77}, {'connected_gene': 'LINC01715', 'score': 550.77}, {'connected_gene': 'SRSF4', 'score': 14.76}, {'connected_gene': 'YTHDF2', 'score': 13.62}, {'connected_gene': 'GMEB1', 'score': 13.41}, {'connected_gene': 'SNORA73B', 'score': 12.97}, {'connected_gene': 'SNHG12', 'score': 12.93}, {'connected_gene': 'SNHG3', 'score': 12.52}, {'connected_gene': 'TRNAU1AP', 'score': 11.29}, {'connected_gene': 'PHACTR4', 'score': 10.98}, {'connected_gene': 'RCC1', 'score': 10.02}, {'connected_gene': 'GC01P028670', 'score': 0.44}]
chr1 GH01I028368 28368859 28371299 2.07 [{'connected_gene': 'PHACTR4', 'score': 596.34}, {'connected_gene': 'SRSF4', 'score': 39.34}, {'connected_gene': 'YTHDF2', 'score': 34.75}, {'connected_gene': 'GMEB1', 'score': 31.34}, {'connected_gene': 'SNHG12', 'score': 27.59}, {'connected_gene': 'TRNAU1AP', 'score': 23.81}, {'connected_gene': 'ENSG00000231344', 'score': 18.28}, {'connected_gene': 'RCC1', 'score': 12.14}, {'connected_gene': 'SESN2', 'score': 11.35}, {'connected_gene': 'SNORA73B', 'score': 11.22}, {'connected_gene': 'FAM76A', 'score': 10.35}, {'connected_gene': 'SNHG3', 'score': 10.29}, {'connected_gene': 'ENSG00000237934', 'score': 10.04}, {'connected_gene': 'EYA3', 'score': 9.79}, {'connected_gene': 'THEMIS2', 'score': 4.11}, {'connected_gene': 'ENSG00000206779', 'score': 0.23}]
chr1 GH01I028436 28436472 28439976 1.98 [{'connected_gene': 'PHACTR4', 'score': 592.15}, {'connected_gene': 'SRSF4', 'score': 23.39}, {'connected_gene': 'GMEB1', 'score': 18.87}, {'connected_gene': 'SNHG12', 'score': 16.38}, {'connected_gene': 'TRNAU1AP', 'score': 16.13}, {'connected_gene': 'YTHDF2', 'score': 13.49}, {'connected_gene': 'ENSG00000231344', 'score': 11.4}, {'connected_gene': 'ENSG00000237934', 'score': 11.03}, {'connected_gene': 'SNORA73B', 'score': 9.91}, {'connected_gene': 'RCC1', 'score': 9.88}, {'connected_gene': 'ENSG00000229820', 'score': 0.37}, {'connected_gene': 'ENSG00000206779', 'score': 0.37}]
chr1 GH01I028512 28511589 28511778 0.99 [{'connected_gene': 'PHACTR4', 'score': 32.24}, {'connected_gene': 'SRSF4', 'score': 18.72}, {'connected_gene': 'GMEB1', 'score': 17.24}, {'connected_gene': 'TRNAU1AP', 'score': 15.27}, {'connected_gene': 'SNHG12', 'score': 13.64}, {'connected_gene': 'TAF12', 'score': 13.43}, {'connected_gene': 'YTHDF2', 'score': 12.2}, {'connected_gene': 'SNORA73B', 'score': 0.77}, {'connected_gene': 'RCC1', 'score': 0.44}, {'connected_gene': 'PRDX3P2', 'score': 0.37}]
chr1 GH01I030083 30083008 30086463 1.06 [{'connected_gene': 'SRSF4', 'score': 18.13}, {'connected_gene': 'PUM1', 'score': 14.87}, {'connected_gene': 'TMEM200B', 'score': 9.85}, {'connected_gene': 'PIR34057', 'score': 0.37}, {'connected_gene': 'LINC01648', 'score': 0.25}]
chr1 GH01I028513 28513073 28513959 0.92 [{'connected_gene': 'SRSF4', 'score': 42.3}, {'connected_gene': 'SNHG12', 'score': 30.95}, {'connected_gene': 'GMEB1', 'score': 30.42}, {'connected_gene': 'TRNAU1AP', 'score': 27.41}, {'connected_gene': 'PHACTR4', 'score': 22.7}, {'connected_gene': 'YTHDF2', 'score': 21.58}, {'connected_gene': 'TAF12', 'score': 13.44}, {'connected_gene': 'SNORA73B', 'score': 11.87}, {'connected_gene': 'SNHG3', 'score': 10.61}, {'connected_gene': 'ENSG00000237934', 'score': 10.04}, {'connected_gene': 'ENSG00000231344', 'score': 10.03}, {'connected_gene': 'RCC1', 'score': 0.44}, {'connected_gene': 'PRDX3P2', 'score': 0.39}]
chr1 GH01I028511 28511849 28512849 0.99 [{'connected_gene': 'SRSF4', 'score': 42.3}, {'connected_gene': 'SNHG12', 'score': 30.94}, {'connected_gene': 'GMEB1', 'score': 30.42}, {'connected_gene': 'TRNAU1AP', 'score': 27.4}, {'connected_gene': 'YTHDF2', 'score': 21.58}, {'connected_gene': 'PHACTR4', 'score': 20.66}, {'connected_gene': 'TAF12', 'score': 13.43}, {'connected_gene': 'SNORA73B', 'score': 11.87}, {'connected_gene': 'SNHG3', 'score': 10.61}, {'connected_gene': 'ENSG00000237934', 'score': 10.04}, {'connected_gene': 'ENSG00000231344', 'score': 10.03}, {'connected_gene': 'RCC1', 'score': 0.44}, {'connected_gene': 'PRDX3P2', 'score': 0.39}]
chr1 GH01I028518 28515829 28515938 0.69 [{'connected_gene': 'SRSF4', 'score': 18.72}, {'connected_gene': 'GMEB1', 'score': 17.24}, {'connected_gene': 'TRNAU1AP', 'score': 15.29}, {'connected_gene': 'SNHG12', 'score': 13.65}, {'connected_gene': 'TAF12', 'score': 13.44}, {'connected_gene': 'YTHDF2', 'score': 12.2}, {'connected_gene': 'SNORA73B', 'score': 0.44}, {'connected_gene': 'RCC1', 'score': 0.44}, {'connected_gene': 'PRDX3P2', 'score': 0.39}]
chr1 GH01I029201 29201181 29203598 1.23 [{'connected_gene': 'SRSF4', 'score': 44.61}, {'connected_gene': 'GMEB1', 'score': 29.94}, {'connected_gene': 'TRNAU1AP', 'score': 28.59}, {'connected_gene': 'SNHG12', 'score': 27.15}, {'connected_gene': 'MECR', 'score': 20.69}, {'connected_gene': 'YTHDF2', 'score': 20.36}, {'connected_gene': 'TMEM200B', 'score': 18.58}, {'connected_gene': 'TAF12', 'score': 13.34}, {'connected_gene': 'ENSG00000237934', 'score': 11.75}]
chr1 GH01I029178 29178698 29183553 2.32 [{'connected_gene': 'SRSF4', 'score': 583.93}, {'connected_gene': 'GMEB1', 'score': 28.44}, {'connected_gene': 'YTHDF2', 'score': 24.11}, {'connected_gene': 'SNHG12', 'score': 22.48}, {'connected_gene': 'TRNAU1AP', 'score': 20.25}, {'connected_gene': 'RCC1', 'score': 18.24}, {'connected_gene': 'SNORA73B', 'score': 12.88}, {'connected_gene': 'SNHG3', 'score': 12.43}, {'connected_gene': 'DNAJC8', 'score': 10.3}, {'connected_gene': 'ENSG00000237934', 'score': 10.21}, {'connected_gene': 'MECR', 'score': 9.23}, {'connected_gene': 'EPB41', 'score': 6.14}, {'connected_gene': 'ENSG00000277916', 'score': 0.44}]
chr1 GH01I028326 28326375 28330801 2.3 [{'connected_gene': 'MED18', 'score': 550.77}, {'connected_gene': 'PHACTR4', 'score': 22.99}, {'connected_gene': 'EYA3', 'score': 22.25}, {'connected_gene': 'GMEB1', 'score': 21.9}, {'connected_gene': 'TMEM200B', 'score': 14.25}, {'connected_gene': 'SRSF4', 'score': 11.35}, {'connected_gene': 'FAM76A', 'score': 11.21}, {'connected_gene': 'SESN2', 'score': 0.2}]
chr1 GH01I028735 28735414 28739185 2.13 [{'connected_gene': 'YTHDF2', 'score': 575.67}, {'connected_gene': 'GC01M028743', 'score': 550.77}, {'connected_gene': 'GC01P028737', 'score': 550.77}, {'connected_gene': 'SRSF4', 'score': 39.36}, {'connected_gene': 'GMEB1', 'score': 31.48}, {'connected_gene': 'PHACTR4', 'score': 29.32}, {'connected_gene': 'SNHG12', 'score': 27.61}, {'connected_gene': 'TRNAU1AP', 'score': 23.81}, {'connected_gene': 'ENSG00000231344', 'score': 18.28}, {'connected_gene': 'RCC1', 'score': 12.09}, {'connected_gene': 'SNORA73B', 'score': 11.17}, {'connected_gene': 'SNHG3', 'score': 10.24}, {'connected_gene': 'ENSG00000237934', 'score': 10.06}, {'connected_gene': 'EYA3', 'score': 9.75}]
chr1 GH01I029185 29185796 29187758 1.02 [{'connected_gene': 'MECR', 'score': 19.98}, {'connected_gene': 'SRSF4', 'score': 0.77}, {'connected_gene': 'ENSG00000237934', 'score': 0.28}]
chr1 GH01I029155 29155534 29158768 1.2 [{'connected_gene': 'MECR', 'score': 4.32}, {'connected_gene': 'ENSG00000225750', 'score': 0.39}, {'connected_gene': 'ENSG00000277916', 'score': 0.39}, {'connected_gene': 'SRSF4', 'score': 0.34}]
chr1 GH01I029208 29208549 29208698 0.74 [{'connected_gene': 'MECR', 'score': 11.03}, {'connected_gene': 'ENSG00000233427', 'score': 10.64}, {'connected_gene': 'SRSF4', 'score': 10.64}, {'connected_gene': 'ENSG00000237934', 'score': 0.37}]
chr1 GH01I029196 29196022 29198314 0.67 [{'connected_gene': 'MECR', 'score': 19.24}, {'connected_gene': 'ENSG00000237934', 'score': 10.97}, {'connected_gene': 'TMEM200B', 'score': 10.91}, {'connected_gene': 'ENSG00000233427', 'score': 10.05}, {'connected_gene': 'SRSF4', 'score': 0.37}]
chr1 GH01I029229 29229825 29231550 2.06 [{'connected_gene': 'MECR', 'score': 555.13}, {'connected_gene': 'GMEB1', 'score': 18.14}, {'connected_gene': 'SRSF4', 'score': 15.96}, {'connected_gene': 'YTHDF2', 'score': 15.62}, {'connected_gene': 'RCC1', 'score': 12.04}, {'connected_gene': 'TRNAU1AP', 'score': 11.57}, {'connected_gene': 'SNHG12', 'score': 10.2}, {'connected_gene': 'TMEM200B', 'score': 5.48}, {'connected_gene': 'ENSG00000237934', 'score': 0.44}]
chr1 GH01I029163 29163914 29167495 0.83 [{'connected_gene': 'TMEM200B', 'score': 19.5}, {'connected_gene': 'MECR', 'score': 14.78}, {'connected_gene': 'ENSG00000233427', 'score': 10.27}, {'connected_gene': 'ENSG00000237934', 'score': 9.78}, {'connected_gene': 'SRSF4', 'score': 4.47}, {'connected_gene': 'ENSG00000277916', 'score': 0.44}, {'connected_gene': 'ENSG00000225750', 'score': 0.37}]
chr1 GH01I029148 29148576 29149557 0.59 [{'connected_gene': 'TMEM200B', 'score': 7.6}, {'connected_gene': 'MECR', 'score': 5.31}, {'connected_gene': 'ENSG00000225750', 'score': 0.77}, {'connected_gene': 'ENSG00000277916', 'score': 0.34}, {'connected_gene': 'SRSF4', 'score': 0.29}]
chr1 GH01I029176 29176505 29177293 0.69 [{'connected_gene': 'TMEM200B', 'score': 8.23}, {'connected_gene': 'EPB41', 'score': 7.0}, {'connected_gene': 'ENSG00000277916', 'score': 0.44}, {'connected_gene': 'SRSF4', 'score': 0.44}, {'connected_gene': 'MECR', 'score': 0.23}]
chr1 GH01I028504 28504922 28511495 2.32 [{'connected_gene': 'SNORA73B', 'score': 572.97}, {'connected_gene': 'RCC1', 'score': 560.67}, {'connected_gene': 'SNORA73A', 'score': 550.77}, {'connected_gene': 'SRSF4', 'score': 64.12}, {'connected_gene': 'GMEB1', 'score': 61.89}, {'connected_gene': 'TRNAU1AP', 'score': 52.65}, {'connected_gene': 'SNHG12', 'score': 41.8}, {'connected_gene': 'PHACTR4', 'score': 41.55}, {'connected_gene': 'YTHDF2', 'score': 33.21}, {'connected_gene': 'SNHG3', 'score': 21.62}, {'connected_gene': 'TAF12', 'score': 13.43}, {'connected_gene': 'PTAFR', 'score': 12.37}, {'connected_gene': 'FAM76A', 'score': 10.32}, {'connected_gene': 'AHDC1', 'score': 10.17}, {'connected_gene': 'ENSG00000237934', 'score': 10.04}, {'connected_gene': 'ENSG00000231344', 'score': 10.02}, {'connected_gene': 'THEMIS2', 'score': 4.5}]
chr1 GH01I028232 28232000 28233619 2.03 [{'connected_gene': 'DNAJC8', 'score': 550.77}, {'connected_gene': 'ENSG00000270605', 'score': 72.93}, {'connected_gene': 'SRSF4', 'score': 38.72}, {'connected_gene': 'SNHG12', 'score': 31.97}, {'connected_gene': 'ACTG1P20', 'score': 28.5}, {'connected_gene': 'TRNAU1AP', 'score': 25.96}, {'connected_gene': 'PHACTR4', 'score': 20.32}, {'connected_gene': 'ENSG00000231344', 'score': 18.69}, {'connected_gene': 'ENSG00000237934', 'score': 18.53}, {'connected_gene': 'GMEB1', 'score': 15.1}, {'connected_gene': 'FAM76A', 'score': 13.09}, {'connected_gene': 'TMEM200B', 'score': 12.61}, {'connected_gene': 'SNORA73B', 'score': 11.16}, {'connected_gene': 'YTHDF2', 'score': 11.15}, {'connected_gene': 'MAP3K6', 'score': 10.97}, {'connected_gene': 'SNHG3', 'score': 10.23}, {'connected_gene': 'EYA3', 'score': 5.33}, {'connected_gene': 'PTAFR', 'score': 0.28}]
chr1 GH01I029177 29177400 29177898 1.38 [{'connected_gene': 'EPB41', 'score': 3.56}, {'connected_gene': 'SRSF4', 'score': 2.1}, {'connected_gene': 'YTHDF2', 'score': 1.6}, {'connected_gene': 'ENSG00000277916', 'score': 0.44}, {'connected_gene': 'MECR', 'score': 0.23}]
chr1 GH01I029160 29160421 29162979 0.54 [{'connected_gene': 'EPB41', 'score': 7.0}, {'connected_gene': 'MECR', 'score': 5.15}, {'connected_gene': 'ENSG00000277916', 'score': 0.44}, {'connected_gene': 'ENSG00000225750', 'score': 0.39}, {'connected_gene': 'SRSF4', 'score': 0.34}]
chr1 GH01I028881 28881866 28888618 2.8 [{'connected_gene': 'EPB41', 'score': 558.38}, {'connected_gene': 'LOC105376898', 'score': 550.77}, {'connected_gene': 'SRSF4', 'score': 137.56}, {'connected_gene': 'TRNAU1AP', 'score': 120.32}, {'connected_gene': 'GMEB1', 'score': 110.21}, {'connected_gene': 'SNHG12', 'score': 102.38}, {'connected_gene': 'YTHDF2', 'score': 80.24}, {'connected_gene': 'PHACTR4', 'score': 47.01}, {'connected_gene': 'EYA3', 'score': 46.8}, {'connected_gene': 'TMEM200B', 'score': 44.72}, {'connected_gene': 'RCC1', 'score': 38.2}, {'connected_gene': 'ENSG00000237934', 'score': 28.27}, {'connected_gene': 'SNORA73B', 'score': 28.24}, {'connected_gene': 'SNHG3', 'score': 18.82}, {'connected_gene': 'PTPRU', 'score': 11.69}, {'connected_gene': 'RAB42', 'score': 10.58}, {'connected_gene': 'DNAJC8', 'score': 10.3}, {'connected_gene': 'GC01M028882', 'score': 0.77}, {'connected_gene': 'ENSG00000199756', 'score': 0.77}]
chr1 GH01I028516 28516721 28520844 2.29 [{'connected_gene': 'RCC1', 'score': 560.37}, {'connected_gene': 'GMEB1', 'score': 62.19}, {'connected_gene': 'SRSF4', 'score': 58.36}, {'connected_gene': 'TRNAU1AP', 'score': 44.44}, {'connected_gene': 'SNHG12', 'score': 40.6}, {'connected_gene': 'PHACTR4', 'score': 37.86}, {'connected_gene': 'YTHDF2', 'score': 32.16}, {'connected_gene': 'ENSG00000237934', 'score': 18.32}, {'connected_gene': 'ENSG00000231344', 'score': 18.22}, {'connected_gene': 'TAF12', 'score': 13.44}, {'connected_gene': 'SNORA73B', 'score': 11.49}, {'connected_gene': 'SNHG3', 'score': 10.57}, {'connected_gene': 'EYA3', 'score': 10.16}, {'connected_gene': 'PRDX3P2', 'score': 0.44}]
chr1 GH01I029379 29379609 29379718 0.94 [{'connected_gene': 'GMEB1', 'score': 49.15}, {'connected_gene': 'SRSF4', 'score': 46.19}, {'connected_gene': 'YTHDF2', 'score': 23.63}, {'connected_gene': 'TRNAU1AP', 'score': 23.32}, {'connected_gene': 'SNHG12', 'score': 20.98}, {'connected_gene': 'RCC1', 'score': 12.04}, {'connected_gene': 'TMEM200B', 'score': 10.3}, {'connected_gene': 'LINC01756', 'score': 0.31}, {'connected_gene': 'ENSG00000225011', 'score': 0.13}]
chr1 GH01I028925 28925282 28931370 1.68 [{'connected_gene': 'GMEB1', 'score': 14.23}, {'connected_gene': 'SRSF4', 'score': 11.0}, {'connected_gene': 'ENSG00000233427', 'score': 10.79}, {'connected_gene': 'EPB41', 'score': 9.2}, {'connected_gene': 'MECR', 'score': 8.48}, {'connected_gene': 'PTPRU', 'score': 4.98}, {'connected_gene': 'GC01M028891', 'score': 0.39}, {'connected_gene': 'RPL27P4', 'score': 0.23}]
chr1 GH01I029033 29033949 29034098 0.72 [{'connected_gene': 'GMEB1', 'score': 14.21}, {'connected_gene': 'ENSG00000233427', 'score': 11.72}, {'connected_gene': 'SRSF4', 'score': 11.04}, {'connected_gene': 'ENSG00000277958', 'score': 0.44}, {'connected_gene': 'GC01M029025', 'score': 0.44}, {'connected_gene': 'EPB41', 'score': 0.11}]
chr1 GH01I028667 28667446 28670404 2.01 [{'connected_gene': 'GMEB1', 'score': 568.88}, {'connected_gene': 'EYA3', 'score': 18.18}, {'connected_gene': 'YTHDF2', 'score': 15.79}, {'connected_gene': 'SRSF4', 'score': 15.74}, {'connected_gene': 'RCC1', 'score': 12.11}, {'connected_gene': 'PHACTR4', 'score': 12.07}, {'connected_gene': 'TRNAU1AP', 'score': 11.67}, {'connected_gene': 'FAM76A', 'score': 10.34}, {'connected_gene': 'SNHG12', 'score': 10.34}, {'connected_gene': 'ENSG00000231344', 'score': 9.95}, {'connected_gene': 'ENSG00000252777', 'score': 0.34}]
chr1 GH01I029236 29236185 29241243 2.33 [{'connected_gene': 'PTPRU', 'score': 558.7}, {'connected_gene': 'SRSF4', 'score': 91.78}, {'connected_gene': 'GMEB1', 'score': 77.25}, {'connected_gene': 'TRNAU1AP', 'score': 66.23}, {'connected_gene': 'YTHDF2', 'score': 63.29}, {'connected_gene': 'SNHG12', 'score': 61.57}, {'connected_gene': 'PHACTR4', 'score': 55.74}, {'connected_gene': 'TMEM200B', 'score': 55.43}, {'connected_gene': 'RCC1', 'score': 29.13}, {'connected_gene': 'ENSG00000237934', 'score': 24.06}, {'connected_gene': 'SNORA73B', 'score': 18.87}, {'connected_gene': 'RAB42', 'score': 10.55}, {'connected_gene': 'SNHG3', 'score': 10.3}, {'connected_gene': 'MECR', 'score': 4.62}, {'connected_gene': 'LINC01756', 'score': 0.14}]
chr1 GH01I029356 29356785 29356944 0.46 [{'connected_gene': 'PTPRU', 'score': 3.29}, {'connected_gene': 'SRSF4', 'score': 2.04}, {'connected_gene': 'LINC01756', 'score': 0.44}, {'connected_gene': 'ENSG00000225011', 'score': 0.11}]
chr1 GH01I028235 28235050 28238084 2.3 [{'connected_gene': 'PIR45679', 'score': 550.77}, {'connected_gene': 'ATP5IF1', 'score': 550.77}, {'connected_gene': 'ENSG00000270605', 'score': 81.07}, {'connected_gene': 'YTHDF2', 'score': 21.29}, {'connected_gene': 'GMEB1', 'score': 19.73}, {'connected_gene': 'ACTG1P20', 'score': 15.47}, {'connected_gene': 'SRSF4', 'score': 11.1}, {'connected_gene': 'RCC1', 'score': 10.88}, {'connected_gene': 'ENSG00000237934', 'score': 10.78}, {'connected_gene': 'FAM76A', 'score': 10.32}, {'connected_gene': 'AHDC1', 'score': 10.18}, {'connected_gene': 'TRNAU1AP', 'score': 9.75}]
chr1 GH01I028242 28242729 28250500 2.27 [{'connected_gene': 'ENSG00000271398', 'score': 550.77}, {'connected_gene': 'ENSG00000270605', 'score': 80.77}, {'connected_gene': 'SRSF4', 'score': 39.34}, {'connected_gene': 'GMEB1', 'score': 33.01}, {'connected_gene': 'SNHG12', 'score': 27.56}, {'connected_gene': 'PTAFR', 'score': 25.56}, {'connected_gene': 'ACTG1P20', 'score': 25.51}, {'connected_gene': 'YTHDF2', 'score': 24.94}, {'connected_gene': 'TRNAU1AP', 'score': 23.78}, {'connected_gene': 'PHACTR4', 'score': 23.28}, {'connected_gene': 'EYA3', 'score': 21.77}, {'connected_gene': 'ENSG00000231344', 'score': 18.28}, {'connected_gene': 'RCC1', 'score': 12.09}, {'connected_gene': 'SESN2', 'score': 11.28}, {'connected_gene': 'SNORA73B', 'score': 11.16}, {'connected_gene': 'FAM76A', 'score': 10.35}, {'connected_gene': 'SNHG3', 'score': 10.24}, {'connected_gene': 'RNU7-29P', 'score': 10.06}, {'connected_gene': 'RNU6-176P', 'score': 10.06}, {'connected_gene': 'ENSG00000237934', 'score': 10.04}, {'connected_gene': 'ATP5IF1', 'score': 4.39}, {'connected_gene': 'MED18', 'score': 3.99}, {'connected_gene': 'THEMIS2', 'score': 1.46}, {'connected_gene': 'STX12', 'score': 1.17}]
chr1 GH01I029190 29190762 29191362 0.56 [{'connected_gene': 'ENSG00000237934', 'score': 10.63}, {'connected_gene': 'MECR', 'score': 10.61}, {'connected_gene': 'SRSF4', 'score': 0.44}]
chr1 GH01I029191 29191409 29191558 0.46 [{'connected_gene': 'ENSG00000237934', 'score': 10.63}, {'connected_gene': 'MECR', 'score': 10.61}, {'connected_gene': 'SRSF4', 'score': 0.44}]
chr1 GH01I029170 29170401 29170600 0.4 [{'connected_gene': 'ENSG00000277916', 'score': 550.77}, {'connected_gene': 'MECR', 'score': 14.72}, {'connected_gene': 'TMEM200B', 'score': 11.35}, {'connected_gene': 'ENSG00000237934', 'score': 10.62}, {'connected_gene': 'SRSF4', 'score': 0.39}, {'connected_gene': 'ENSG00000225750', 'score': 0.34}]
chr1 GH01I029171 29170746 29172252 0.72 [{'connected_gene': 'ENSG00000277916', 'score': 550.77}, {'connected_gene': 'MECR', 'score': 14.17}, {'connected_gene': 'TMEM200B', 'score': 11.35}, {'connected_gene': 'ENSG00000237934', 'score': 10.06}, {'connected_gene': 'PTPRU', 'score': 5.23}, {'connected_gene': 'PHACTR4', 'score': 4.2}, {'connected_gene': 'SRSF4', 'score': 0.39}]
chr1 GH01I029144 29144989 29148279 1.13 [{'connected_gene': 'ENSG00000225750', 'score': 550.77}, {'connected_gene': 'GC01P029145', 'score': 550.77}, {'connected_gene': 'TMEM200B', 'score': 7.57}, {'connected_gene': 'MECR', 'score': 5.31}, {'connected_gene': 'PTPRU', 'score': 4.73}, {'connected_gene': 'SRSF4', 'score': 4.37}]
chr1 GH01I028647 28647107 28649783 1.67 [{'connected_gene': 'GC01P028670', 'score': 550.77}, {'connected_gene': 'ENSG00000270103', 'score': 550.77}, {'connected_gene': 'RNU11', 'score': 550.77}, {'connected_gene': 'GC01P028651', 'score': 550.77}, {'connected_gene': 'GC01P028669', 'score': 550.77}, {'connected_gene': 'GC01P028671', 'score': 550.77}, {'connected_gene': 'GC01P028672', 'score': 550.77}, {'connected_gene': 'SRSF4', 'score': 149.5}, {'connected_gene': 'GMEB1', 'score': 122.65}, {'connected_gene': 'TRNAU1AP', 'score': 98.57}, {'connected_gene': 'YTHDF2', 'score': 96.87}, {'connected_gene': 'SNHG12', 'score': 87.19}, {'connected_gene': 'FAM76A', 'score': 76.55}, {'connected_gene': 'PHACTR4', 'score': 68.93}, {'connected_gene': 'SNORA73B', 'score': 39.7}, {'connected_gene': 'ENSG00000231344', 'score': 36.79}, {'connected_gene': 'SNHG3', 'score': 29.5}, {'connected_gene': 'RCC1', 'score': 29.43}, {'connected_gene': 'ENSG00000237934', 'score': 28.54}, {'connected_gene': 'EYA3', 'score': 26.56}, {'connected_gene': 'PPP1R8', 'score': 25.39}, {'connected_gene': 'TMEM200B', 'score': 21.39}, {'connected_gene': 'TAF12', 'score': 13.75}, {'connected_gene': 'PTPRU', 'score': 10.93}, {'connected_gene': 'RAB42', 'score': 10.74}, {'connected_gene': 'ENSG00000271398', 'score': 4.22}, {'connected_gene': 'LINC01715', 'score': 0.44}]
chr1 GH01I028913 28913512 28916003 2.19 [{'connected_gene': 'GC01M028891', 'score': 550.77}, {'connected_gene': 'EPB41', 'score': 550.31}, {'connected_gene': 'SRSF4', 'score': 18.17}, {'connected_gene': 'SNHG12', 'score': 17.86}, {'connected_gene': 'TRNAU1AP', 'score': 15.43}, {'connected_gene': 'PHACTR4', 'score': 11.15}, {'connected_gene': 'YTHDF2', 'score': 10.63}, {'connected_gene': 'TMEM200B', 'score': 9.9}, {'connected_gene': 'MECR', 'score': 9.46}, {'connected_gene': 'RPL27P4', 'score': 0.2}]

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