PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000288022	[[69362523, 69363082], [69363899, 69364498]]	[[69362924, 69363082], [69363899, 69364473]]
NM_022341	[[69362523, 69363082], [69363899, 69364498]]	[[69362924, 69363082], [69363899, 69364473]]

Promoter

Chrom	Start	End	Description
chr16	69364429	69364448	CAGE_peak_3_at_PDF_5end
chr16	69364449	69364465	CAGE_peak_2_at_PDF_5end
chr16	69364467	69364516	CAGE_peak_1_at_PDF_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr16	GH16I069756	69756674	69757597	0.66	[{'connected_gene': 'NONOP1', 'score': 550.77}, {'connected_gene': 'ENSG00000252443', 'score': 11.58}, {'connected_gene': 'NPIPB14P', 'score': 7.82}, {'connected_gene': 'LOC100506083', 'score': 5.14}, {'connected_gene': 'NOB1', 'score': 2.22}, {'connected_gene': 'PDF', 'score': 1.98}, {'connected_gene': 'NIP7', 'score': 1.56}]
chr16	GH16I069097	69097315	69098117	0.38	[{'connected_gene': 'RNU6-898P', 'score': 11.35}, {'connected_gene': 'UTP4', 'score': 10.51}, {'connected_gene': 'CHTF8', 'score': 10.51}, {'connected_gene': 'SNTB2', 'score': 10.21}, {'connected_gene': 'ENSG00000200164', 'score': 10.21}, {'connected_gene': 'PDF', 'score': 8.23}, {'connected_gene': 'CDH1', 'score': 5.93}, {'connected_gene': 'HAS3', 'score': 0.44}, {'connected_gene': 'RPS2P45', 'score': 0.21}]
chr16	GH16I069328	69328291	69331629	2.06	[{'connected_gene': 'PIR46379', 'score': 550.77}, {'connected_gene': 'PDF', 'score': 550.77}, {'connected_gene': 'UTP4', 'score': 17.55}, {'connected_gene': 'SNTB2', 'score': 12.86}, {'connected_gene': 'NIP7', 'score': 12.8}, {'connected_gene': 'TMED6', 'score': 6.71}, {'connected_gene': 'PIR53878', 'score': 0.77}, {'connected_gene': 'COG8', 'score': 0.44}]
chr16	GH16I069356	69356794	69357599	0.2	[{'connected_gene': 'ENSG00000260371', 'score': 550.77}, {'connected_gene': 'PDF', 'score': 12.41}, {'connected_gene': 'WWP2', 'score': 9.43}, {'connected_gene': 'ENSG00000252443', 'score': 9.42}, {'connected_gene': 'PIR63038', 'score': 0.44}, {'connected_gene': 'TERF2', 'score': 0.23}]
chr16	GH16I069717	69717225	69717625	0.26	[{'connected_gene': 'GC16M069712', 'score': 550.77}, {'connected_gene': 'NQO1', 'score': 8.78}, {'connected_gene': 'TERF2', 'score': 1.25}, {'connected_gene': 'PDF', 'score': 1.21}, {'connected_gene': 'ENSG00000261602', 'score': 0.44}]