PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000263642	[[163123588, 163123889], [163123988, 163124079], [163124596, 163124787], [163128735, 163128897], [163130304, 163130454], [163133196, 163133456], [163133924, 163134203], [163134714, 163134838], [163136505, 163136622], [163137837, 163138055], [163138875, 163139086], [163144644, 163144865], [163150073, 163150178], [163163218, 163163365], [163167274, 163167443], [163174364, 163175213]]	[[163123709, 163123889], [163123988, 163124079], [163124596, 163124787], [163128735, 163128897], [163130304, 163130454], [163133196, 163133456], [163133924, 163134203], [163134714, 163134838], [163136505, 163136622], [163137837, 163138055], [163138875, 163139086], [163144644, 163144865], [163150073, 163150178], [163163218, 163163365], [163167274, 163167443], [163174364, 163174817]]
ENST00000464129	[[163150073, 163150178], [163163218, 163163680]]	None
ENST00000421365	[[163166656, 163167443], [163174364, 163175194]]	[[163167230, 163167443], [163174364, 163174817]]
NM_022168	[[163123588, 163123889], [163123988, 163124079], [163124596, 163124787], [163128735, 163128897], [163130304, 163130454], [163133196, 163133456], [163133924, 163134203], [163134714, 163134838], [163136505, 163136622], [163137837, 163138055], [163138875, 163139086], [163144644, 163144865], [163150073, 163150178], [163163218, 163163365], [163167274, 163167443], [163174364, 163175218]]	[[163123709, 163123889], [163123988, 163124079], [163124596, 163124787], [163128735, 163128897], [163130304, 163130454], [163133196, 163133456], [163133924, 163134203], [163134714, 163134838], [163136505, 163136622], [163137837, 163138055], [163138875, 163139086], [163144644, 163144865], [163150073, 163150178], [163163218, 163163365], [163167274, 163167443], [163174364, 163174817]]

Promoter

Chrom	Start	End	Description
chr2	163137897	163137919	CAGE_peak_5_at_IFIH1_5end
chr2	163137977	163137989	CAGE_peak_10_at_IFIH1_5end
chr2	163138115	163138124	CAGE_peak_14_at_IFIH1_5end
chr2	163174639	163174649	CAGE_peak_12_at_IFIH1_5end
chr2	163175088	163175101	CAGE_peak_4_at_IFIH1_5end
chr2	163175133	163175222	CAGE_peak_1_at_IFIH1_5end
chr2	163175430	163175460	CAGE_peak_2_at_IFIH1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I162316	162316600	162320840	2.17	[{'connected_gene': 'IFIH1', 'score': 550.77}, {'connected_gene': 'GCA', 'score': 550.77}, {'connected_gene': 'FAP', 'score': 4.91}, {'connected_gene': 'GC02M162307', 'score': 0.39}]
chr2	GH02I161961	161961139	161961564	0.29	[{'connected_gene': 'IFIH1', 'score': 15.21}, {'connected_gene': 'RPEP5', 'score': 0.31}, {'connected_gene': 'ENSG00000230918', 'score': 0.14}, {'connected_gene': 'SLC4A10', 'score': 0.03}]
chr2	GH02I161988	161987387	161987601	0.22	[{'connected_gene': 'IFIH1', 'score': 9.41}, {'connected_gene': 'RPEP5', 'score': 0.22}, {'connected_gene': 'ENSG00000230918', 'score': 0.17}]
chr2	GH02I162258	162258833	162258948	0.44	[{'connected_gene': 'IFIH1', 'score': 3.68}, {'connected_gene': 'LOC105373724', 'score': 0.39}, {'connected_gene': 'GC02P162270', 'score': 0.39}]
chr2	GH02I162343	162343342	162345601	1.98	[{'connected_gene': 'GCA', 'score': 562.59}, {'connected_gene': 'IFIH1', 'score': 12.59}, {'connected_gene': 'FAP', 'score': 4.98}, {'connected_gene': 'GC02P162329', 'score': 0.37}, {'connected_gene': 'RNA5SP109', 'score': 0.1}]
chr2	GH02I162297	162297755	162298400	0.62	[{'connected_gene': 'FAP', 'score': 5.31}, {'connected_gene': 'GC02M162307', 'score': 0.39}, {'connected_gene': 'IFIH1', 'score': 0.34}, {'connected_gene': 'GC02P162270', 'score': 0.31}]
chr2	GH02I162301	162301291	162301420	0.62	[{'connected_gene': 'LOC101929532', 'score': 9.13}, {'connected_gene': 'GC02M162307', 'score': 0.44}, {'connected_gene': 'IFIH1', 'score': 0.37}, {'connected_gene': 'GC02P162270', 'score': 0.29}]