PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000371445	[[53925071, 53925703], [53927145, 53927318], [53930309, 53930520], [53932267, 53933161]]	[[53925126, 53925703], [53927145, 53927318], [53930309, 53930520], [53932267, 53932335]]
ENST00000463126	[[53925648, 53926233], [53927145, 53927318], [53930309, 53930352]]	None
NM_033067	[[53925071, 53925703], [53927145, 53927318], [53930309, 53930520], [53932267, 53933161]]	[[53925126, 53925703], [53927145, 53927318], [53930309, 53930520], [53932267, 53932335]]

Promoter

Chrom	Start	End	Description
chr1	53925063	53925076	CAGE_peak_2_at_DMRTB1_5end
chr1	53925386	53925397	CAGE_peak_4_at_DMRTB1_5end
chr1	53925410	53925424	CAGE_peak_3_at_DMRTB1_5end
chr1	53925435	53925444	CAGE_peak_5_at_DMRTB1_5end
chr1	53925459	53925464	CAGE_peak_8_at_DMRTB1_5end
chr1	53925516	53925575	CAGE_peak_1_at_DMRTB1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I053411	53411700	53415166	1.25	[{'connected_gene': 'LRP8', 'score': 15.93}, {'connected_gene': 'MAGOH', 'score': 11.14}, {'connected_gene': 'LOC100507564', 'score': 11.14}, {'connected_gene': 'LINC01771', 'score': 10.69}, {'connected_gene': 'ENSG00000232762', 'score': 10.62}, {'connected_gene': 'RNU7-95P', 'score': 10.02}, {'connected_gene': 'DMRTB1', 'score': 4.56}, {'connected_gene': 'SLC25A3P1', 'score': 0.31}, {'connected_gene': 'LOC105378733', 'score': 0.31}, {'connected_gene': 'ENSG00000230138', 'score': 0.25}]
chr1	GH01I053429	53429606	53432234	0.74	[{'connected_gene': 'DMRTB1', 'score': 11.2}, {'connected_gene': 'LRP8', 'score': 10.65}, {'connected_gene': 'MAGOH', 'score': 10.31}, {'connected_gene': 'LOC100507564', 'score': 10.31}, {'connected_gene': 'LINC01771', 'score': 10.16}, {'connected_gene': 'RNU7-95P', 'score': 9.75}, {'connected_gene': 'SLC25A3P1', 'score': 5.11}, {'connected_gene': 'LOC105378733', 'score': 0.44}, {'connected_gene': 'ENSG00000230138', 'score': 0.21}]
chr1	GH01I053434	53434182	53436135	0.4	[{'connected_gene': 'DMRTB1', 'score': 15.61}, {'connected_gene': 'RNU7-95P', 'score': 10.41}, {'connected_gene': 'SLC25A3P1', 'score': 7.36}, {'connected_gene': 'LRRC42', 'score': 5.16}, {'connected_gene': 'LOC105378733', 'score': 0.77}, {'connected_gene': 'ENSG00000230138', 'score': 0.2}]
chr1	GH01I053485	53485588	53485737	0.78	[{'connected_gene': 'DMRTB1', 'score': 11.8}, {'connected_gene': 'RNU7-95P', 'score': 11.33}, {'connected_gene': 'PIR60882', 'score': 0.17}]
chr1	GH01I053459	53459350	53459409	0.5	[{'connected_gene': 'DMRTB1', 'score': 550.77}, {'connected_gene': 'GC01M053449', 'score': 0.44}]
chr1	GH01I053499	53499601	53502456	0.52	[{'connected_gene': 'DMRTB1', 'score': 5.96}, {'connected_gene': 'PIR60882', 'score': 0.19}]
chr1	GH01I053502	53502728	53502857	0.8	[{'connected_gene': 'MAGOH', 'score': 13.05}, {'connected_gene': 'GPX7', 'score': 12.41}, {'connected_gene': 'LRRC42', 'score': 11.11}, {'connected_gene': 'NDC1', 'score': 9.72}, {'connected_gene': 'DMRTB1', 'score': 0.26}, {'connected_gene': 'PIR60882', 'score': 0.19}]
chr1	GH01I053445	53445958	53447220	0.31	[{'connected_gene': 'RNU7-95P', 'score': 11.09}, {'connected_gene': 'DMRTB1', 'score': 6.44}, {'connected_gene': 'GC01M053449', 'score': 0.77}, {'connected_gene': 'SLC25A3P1', 'score': 0.44}, {'connected_gene': 'LOC105378733', 'score': 0.44}]
chr1	GH01I053526	53526090	53527545	0.74	[{'connected_gene': 'RNU7-95P', 'score': 10.93}, {'connected_gene': 'ENSG00000235563', 'score': 4.3}, {'connected_gene': 'PIR60882', 'score': 0.25}, {'connected_gene': 'DMRTB1', 'score': 0.2}, {'connected_gene': 'GLIS1', 'score': 0.08}]
chr1	GH01I053511	53511888	53512780	0.97	[{'connected_gene': 'RNU7-95P', 'score': 10.72}, {'connected_gene': 'DMRTB1', 'score': 0.23}, {'connected_gene': 'PIR60882', 'score': 0.21}, {'connected_gene': 'GLIS1', 'score': 0.07}]
chr1	GH01I053469	53469959	53470933	0.99	[{'connected_gene': 'RNU7-95P', 'score': 10.94}, {'connected_gene': 'DMRTB1', 'score': 0.39}, {'connected_gene': 'PIR60882', 'score': 0.15}]
chr1	GH01I053529	53529903	53532299	0.38	[{'connected_gene': 'RNU7-95P', 'score': 10.93}, {'connected_gene': 'TCEANC2', 'score': 6.24}, {'connected_gene': 'PIR60882', 'score': 0.26}, {'connected_gene': 'DMRTB1', 'score': 0.19}, {'connected_gene': 'GLIS1', 'score': 0.08}]
chr1	GH01I053540	53540783	53544079	1.07	[{'connected_gene': 'PIR60882', 'score': 0.29}, {'connected_gene': 'DMRTB1', 'score': 0.18}, {'connected_gene': 'GLIS1', 'score': 0.08}]
chr1	GH01I053552	53552328	53552417	0.66	[{'connected_gene': 'PIR60882', 'score': 0.34}, {'connected_gene': 'DMRTB1', 'score': 0.16}, {'connected_gene': 'GLIS1', 'score': 0.09}]
chr1	GH01I053447	53447417	53450537	0.79	[{'connected_gene': 'GC01M053449', 'score': 550.77}, {'connected_gene': 'RNU7-95P', 'score': 11.09}, {'connected_gene': 'DMRTB1', 'score': 9.04}, {'connected_gene': 'SLC25A3P1', 'score': 0.44}, {'connected_gene': 'LOC105378733', 'score': 0.44}]
chr1	GH01I053572	53572179	53573807	0.69	[{'connected_gene': 'PIR60882', 'score': 550.77}, {'connected_gene': 'RNU7-95P', 'score': 10.65}, {'connected_gene': 'HSPB11', 'score': 10.48}, {'connected_gene': 'DMRTB1', 'score': 0.14}, {'connected_gene': 'GLIS1', 'score': 0.1}]