PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000437504	[[9966773, 9967167], [10023769, 10023864]]	None
ENST00000378392	[[10015688, 10015981], [10016226, 10016290], [10018905, 10019295], [10023769, 10023969], [10025041, 10025191], [10026221, 10026345], [10030037, 10030860], [10032310, 10032537], [10033759, 10033923], [10035109, 10035247], [10036149, 10036470]]	[[10018949, 10019295], [10023769, 10023969], [10025041, 10025191], [10026221, 10026345], [10030037, 10030860], [10032310, 10032537], [10033759, 10033923], [10035109, 10035247], [10036149, 10036308]]
ENST00000378380	[[10015696, 10015981], [10018905, 10019295], [10023769, 10023969], [10025041, 10025191], [10026221, 10026345], [10030037, 10030860], [10032310, 10032537], [10033759, 10033923], [10035109, 10035247], [10036149, 10037410]]	[[10018949, 10019295], [10023769, 10023969], [10025041, 10025191], [10026221, 10026345], [10030037, 10030860], [10032310, 10032537], [10033759, 10033923], [10035109, 10035247], [10036149, 10036308]]
ENST00000488991	[[10015764, 10015981], [10018905, 10019295], [10021272, 10021318], [10023769, 10023969], [10025041, 10025191], [10026221, 10026345], [10030037, 10030860], [10032310, 10032537], [10033759, 10033923], [10035109, 10035247], [10036149, 10036475]]	None
NM_198798	[[10015646, 10015981], [10018905, 10019295], [10023769, 10023969], [10025041, 10025191], [10026221, 10026345], [10030037, 10030860], [10032310, 10032537], [10033759, 10033923], [10035109, 10035247], [10036149, 10037410]]	[[10018949, 10019295], [10023769, 10023969], [10025041, 10025191], [10026221, 10026345], [10030037, 10030860], [10032310, 10032537], [10033759, 10033923], [10035109, 10035247], [10036149, 10036308]]
NM_001303472	[[10015646, 10015981], [10018905, 10019295], [10021272, 10021318], [10023769, 10023969], [10025041, 10025191], [10026221, 10026345], [10030037, 10030860], [10032310, 10032537], [10033759, 10033923], [10035109, 10035247], [10036149, 10037410]]	[[10025062, 10025191], [10026221, 10026345], [10030037, 10030860], [10032310, 10032537], [10033759, 10033923], [10035109, 10035247], [10036149, 10036308]]
NM_022096	[[10015646, 10015981], [10016226, 10016290], [10018905, 10019295], [10023769, 10023969], [10025041, 10025191], [10026221, 10026345], [10030037, 10030860], [10032310, 10032537], [10033759, 10033923], [10035109, 10035247], [10036149, 10037410]]	[[10018949, 10019295], [10023769, 10023969], [10025041, 10025191], [10026221, 10026345], [10030037, 10030860], [10032310, 10032537], [10033759, 10033923], [10035109, 10035247], [10036149, 10036308]]

Promoter

Chrom	Start	End	Description
chr20	10015612	10015675	CAGE_peak_2_at_ANKRD5_5end
chr20	10015678	10015766	CAGE_peak_1_at_ANKRD5_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr20	GH20I010074	10074226	10079034	1.14	[{'connected_gene': 'ANKEF1', 'score': 19.5}, {'connected_gene': 'SNAP25-AS1', 'score': 10.84}, {'connected_gene': 'GC20M010116', 'score': 0.26}, {'connected_gene': 'ENSG00000276525', 'score': 0.23}]
chr20	GH20I010090	10090673	10090822	0.76	[{'connected_gene': 'ANKEF1', 'score': 8.81}, {'connected_gene': 'GC20M010116', 'score': 0.31}, {'connected_gene': 'ENSG00000276525', 'score': 0.21}, {'connected_gene': 'SNAP25-AS1', 'score': 0.06}]
chr20	GH20I010034	10034433	10035985	1.98	[{'connected_gene': 'ANKEF1', 'score': 563.22}, {'connected_gene': 'ENSG00000276525', 'score': 0.44}, {'connected_gene': 'GC20M010116', 'score': 0.18}, {'connected_gene': 'SNAP25-AS1', 'score': 0.06}]
chr20	GH20I010080	10080053	10080382	0.72	[{'connected_gene': 'ANKEF1', 'score': 23.04}, {'connected_gene': 'GC20M010116', 'score': 0.28}, {'connected_gene': 'ENSG00000276525', 'score': 0.23}, {'connected_gene': 'SNAP25-AS1', 'score': 0.06}]
chr20	GH20I010093	10093093	10093982	0.79	[{'connected_gene': 'ANKEF1', 'score': 7.28}, {'connected_gene': 'GC20M010116', 'score': 0.34}, {'connected_gene': 'ENSG00000276525', 'score': 0.2}, {'connected_gene': 'SNAP25-AS1', 'score': 0.06}]
chr20	GH20I009977	9977818	9978870	1.04	[{'connected_gene': 'ANKEF1', 'score': 0.44}, {'connected_gene': 'GC20M009874', 'score': 0.15}]
chr20	GH20I009919	9919201	9919400	0.38	[{'connected_gene': 'PAK5', 'score': 9.46}, {'connected_gene': 'GC20M009874', 'score': 0.26}, {'connected_gene': 'ANKEF1', 'score': 0.2}]
chr20	GH20I010084	10084174	10086501	0.31	[{'connected_gene': 'SNAP25-AS1', 'score': 8.39}, {'connected_gene': 'ANKEF1', 'score': 7.37}, {'connected_gene': 'GC20M010116', 'score': 0.29}, {'connected_gene': 'ENSG00000276525', 'score': 0.22}]
chr20	GH20I009989	9989000	9989401	0.4	[{'connected_gene': 'SNAP25-AS1', 'score': 11.44}, {'connected_gene': 'PARAL1', 'score': 0.77}, {'connected_gene': 'ANKEF1', 'score': 0.77}, {'connected_gene': 'GC20P010021', 'score': 0.29}]
chr20	GH20I010040	10040253	10040402	0.66	[{'connected_gene': 'ENSG00000276525', 'score': 0.39}, {'connected_gene': 'ANKEF1', 'score': 0.23}, {'connected_gene': 'GC20M010116', 'score': 0.18}, {'connected_gene': 'SNAP25-AS1', 'score': 0.05}]