PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000369183	[[120065400, 120070420], [120070718, 120070825], [120085665, 120085755], [120094625, 120094725], [120094907, 120094938], [120095065, 120095153], [120095693, 120095935], [120101238, 120101439], [120101781, 120101832]]	[[120070368, 120070420], [120070718, 120070825], [120085665, 120085755], [120094625, 120094725], [120094907, 120094938], [120095065, 120095153], [120095693, 120095927]]
ENST00000452252	[[120068117, 120068377], [120068592, 120068644], [120069046, 120069092]]	None
ENST00000467890	[[120069925, 120070420], [120070718, 120070998]]	None
ENST00000491416	[[120070147, 120070420], [120070718, 120070825], [120085665, 120085861]]	None
ENST00000470476	[[120070231, 120070420], [120070718, 120070825], [120081816, 120081923], [120085665, 120085755], [120094625, 120094725], [120094907, 120094938], [120095065, 120095153], [120095693, 120095935], [120101781, 120101827]]	[[120070815, 120070825], [120081816, 120081923], [120085665, 120085755], [120094625, 120094725], [120094907, 120094938], [120095065, 120095153], [120095693, 120095927]]
ENST00000469758	[[120070231, 120070420], [120070718, 120070825], [120081816, 120081923], [120085665, 120085755], [120094625, 120094725], [120095065, 120095153], [120095693, 120095935], [120101238, 120101439], [120101781, 120101827]]	None
ENST00000369172	[[120070257, 120070420], [120070718, 120070825], [120085665, 120085755], [120094625, 120094725], [120094907, 120094938], [120095065, 120095153], [120095693, 120095935], [120101781, 120101832]]	[[120070368, 120070420], [120070718, 120070825], [120085665, 120085755], [120094625, 120094725], [120094907, 120094938], [120095065, 120095153], [120095693, 120095927]]
ENST00000369170	[[120094625, 120094725], [120094907, 120094938], [120095065, 120095153], [120095693, 120095935], [120101238, 120101752]]	[[120094625, 120094725], [120094907, 120094938], [120095065, 120095153], [120095693, 120095927]]
ENST00000490048	[[120094769, 120095153], [120095693, 120095935], [120101238, 120101258]]	None
ENST00000487269	[[120095536, 120095935], [120101238, 120101439], [120101781, 120101840]]	None
NM_022063	[[120068571, 120070420], [120070718, 120070825], [120085665, 120085755], [120094625, 120094725], [120094907, 120094938], [120095065, 120095153], [120095693, 120095935], [120101238, 120101439], [120101781, 120101839]]	[[120070368, 120070420], [120070718, 120070825], [120085665, 120085755], [120094625, 120094725], [120094907, 120094938], [120095065, 120095153], [120095693, 120095927]]
NM_001134672	[[120068571, 120070420], [120070718, 120070825], [120085665, 120085755], [120094625, 120094725], [120094907, 120094938], [120095065, 120095153], [120095693, 120095935], [120101781, 120101839]]	[[120070368, 120070420], [120070718, 120070825], [120085665, 120085755], [120094625, 120094725], [120094907, 120094938], [120095065, 120095153], [120095693, 120095927]]

Promoter

Chrom	Start	End	Description
chr10	120101443	120101454	CAGE_peak_3_at_FAM204A_5end
chr10	120101779	120101791	CAGE_peak_2_at_FAM204A_5end
chr10	120101804	120101843	CAGE_peak_1_at_FAM204A_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I118792	118792001	118793117	0.77	[{'connected_gene': 'FAM204A', 'score': 1.92}, {'connected_gene': 'CACUL1', 'score': 1.39}, {'connected_gene': 'GC10M118785', 'score': 0.44}, {'connected_gene': 'PIR53333', 'score': 0.34}]
chr10	GH10I118373	118373909	118374058	0.54	[{'connected_gene': 'FAM204A', 'score': 11.36}, {'connected_gene': 'LINC00867', 'score': 0.37}, {'connected_gene': 'GC10P118488', 'score': 0.14}]
chr10	GH10I118381	118381884	118382154	0.51	[{'connected_gene': 'FAM204A', 'score': 11.19}, {'connected_gene': 'LINC00867', 'score': 0.34}, {'connected_gene': 'GC10P118488', 'score': 0.14}]
chr10	GH10I118422	118422098	118422475	0.4	[{'connected_gene': 'FAM204A', 'score': 11.0}, {'connected_gene': 'LINC00867', 'score': 0.2}, {'connected_gene': 'GC10P118488', 'score': 0.2}]
chr10	GH10I118421	118421783	118422028	0.4	[{'connected_gene': 'FAM204A', 'score': 11.0}, {'connected_gene': 'LINC00867', 'score': 0.21}, {'connected_gene': 'GC10P118488', 'score': 0.2}]
chr10	GH10I118341	118341198	118343742	2	[{'connected_gene': 'FAM204A', 'score': 550.77}, {'connected_gene': 'PIR61986', 'score': 550.77}, {'connected_gene': 'LINC00867', 'score': 0.39}]
chr10	GH10I118332	118332351	118333390	0.57	[{'connected_gene': 'FAM204A', 'score': 0.44}, {'connected_gene': 'PIR61986', 'score': 0.44}, {'connected_gene': 'GC10M118305', 'score': 0.34}]
chr10	GH10I118338	118338739	118339448	0.31	[{'connected_gene': 'FAM204A', 'score': 0.77}, {'connected_gene': 'PIR61986', 'score': 0.77}, {'connected_gene': 'GC10M118305', 'score': 0.29}]
chr10	GH10I118316	118316954	118317433	0.4	[{'connected_gene': 'FAM204A', 'score': 11.87}, {'connected_gene': 'GC10M118305', 'score': 0.44}, {'connected_gene': 'GC10P118306', 'score': 0.39}, {'connected_gene': 'PIR61986', 'score': 0.34}]
chr10	GH10I118314	118314527	118316184	0.98	[{'connected_gene': 'GC10M118305', 'score': 0.44}, {'connected_gene': 'GC10P118306', 'score': 0.44}, {'connected_gene': 'FAM204A', 'score': 0.31}, {'connected_gene': 'PIR61986', 'score': 0.31}]