PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000226193	[[9799636, 9801521], [9804305, 9804417], [9808116, 9808938]]	[[9801411, 9801521], [9804305, 9804417], [9808116, 9808497]]
ENST00000570909	[[9801026, 9801521], [9804305, 9804519]]	None
NM_002903	[[9801026, 9801521], [9804305, 9804417], [9808116, 9808684]]	[[9801411, 9801521], [9804305, 9804417], [9808116, 9808497]]

Promoter

Chrom	Start	End	Description
chr17	9804379	9804392	CAGE_peak_3_at_RCVRN_5end
chr17	9804491	9804501	CAGE_peak_5_at_RCVRN_5end
chr17	9804798	9804827	CAGE_peak_6_at_RCVRN_5end
chr17	9808183	9808184	CAGE_peak_4_at_RCVRN_5end
chr17	9808496	9808505	CAGE_peak_2_at_RCVRN_5end
chr17	9808565	9808623	CAGE_peak_1_at_RCVRN_5end
chr17	9808887	9808897	CAGE_peak_7_at_RCVRN_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr17	GH17I009899	9899581	9902423	0.76	[{'connected_gene': 'MYH13', 'score': 10.25}, {'connected_gene': 'RCVRN', 'score': 8.9}, {'connected_gene': 'GC17P009878', 'score': 0.34}]
chr17	GH17I009900	9899424	9899573	0.43	[{'connected_gene': 'MYH13', 'score': 10.25}, {'connected_gene': 'RCVRN', 'score': 0.44}, {'connected_gene': 'GC17P009878', 'score': 0.34}]
chr17	GH17I009968	9968317	9970354	0.85	[{'connected_gene': 'GAS7', 'score': 11.48}, {'connected_gene': 'RCVRN', 'score': 11.3}, {'connected_gene': 'GC17P009965', 'score': 0.77}, {'connected_gene': 'GC17P010023', 'score': 0.23}]
chr17	GH17I009880	9880664	9881000	0.74	[{'connected_gene': 'RCVRN', 'score': 11.44}, {'connected_gene': 'GC17P009878', 'score': 0.77}, {'connected_gene': 'GLP2R', 'score': 0.22}]
chr17	GH17I009937	9937244	9937393	0.4	[{'connected_gene': 'RCVRN', 'score': 11.44}, {'connected_gene': 'GC17M009941', 'score': 0.44}, {'connected_gene': 'GC17P009918', 'score': 0.37}, {'connected_gene': 'GAS7', 'score': 0.07}]
chr17	GH17I010176	10176866	10179774	0.94	[{'connected_gene': 'RCVRN', 'score': 6.67}, {'connected_gene': 'GC17M010159', 'score': 0.39}, {'connected_gene': 'GAS7', 'score': 0.34}]
chr17	GH17I009928	9928457	9929491	1.02	[{'connected_gene': 'RCVRN', 'score': 11.99}, {'connected_gene': 'GC17M009941', 'score': 0.39}, {'connected_gene': 'GC17P009918', 'score': 0.39}, {'connected_gene': 'GAS7', 'score': 0.06}]
chr17	GH17I009938	9937584	9937723	0.4	[{'connected_gene': 'RCVRN', 'score': 11.44}, {'connected_gene': 'GC17M009941', 'score': 0.77}, {'connected_gene': 'GC17P009918', 'score': 0.37}, {'connected_gene': 'GAS7', 'score': 0.07}]
chr17	GH17I009931	9931564	9931713	0.58	[{'connected_gene': 'RCVRN', 'score': 11.46}, {'connected_gene': 'GC17M009941', 'score': 0.39}, {'connected_gene': 'GC17P009918', 'score': 0.39}, {'connected_gene': 'GAS7', 'score': 0.06}]
chr17	GH17I009797	9797805	9799301	0.43	[{'connected_gene': 'RCVRN', 'score': 4.53}, {'connected_gene': 'ENSG00000283025', 'score': 0.44}, {'connected_gene': 'DHRS7C', 'score': 0.44}, {'connected_gene': 'ENSG00000278944', 'score': 0.39}, {'connected_gene': 'ENSG00000282882', 'score': 0.29}]
chr17	GH17I009905	9905561	9905620	0.5	[{'connected_gene': 'RCVRN', 'score': 558.21}, {'connected_gene': 'PIR50616', 'score': 550.77}, {'connected_gene': 'GC17P009878', 'score': 0.31}]
chr17	GH17I009893	9893228	9895054	0.7	[{'connected_gene': 'RCVRN', 'score': 6.85}, {'connected_gene': 'GC17P009878', 'score': 0.37}]
chr17	GH17I009890	9890204	9890393	0.56	[{'connected_gene': 'DHRS7C', 'score': 10.21}, {'connected_gene': 'GC17P009878', 'score': 0.39}, {'connected_gene': 'RCVRN', 'score': 0.37}, {'connected_gene': 'GLP2R', 'score': 0.2}]
chr17	GH17I009841	9841316	9843453	1.08	[{'connected_gene': 'GC17M009839', 'score': 550.77}, {'connected_gene': 'RCVRN', 'score': 10.79}, {'connected_gene': 'GC17P009848', 'score': 0.44}, {'connected_gene': 'GLP2R', 'score': 0.34}]
chr17	GH17I009918	9918662	9919083	0.58	[{'connected_gene': 'GC17P009918', 'score': 550.77}, {'connected_gene': 'RCVRN', 'score': 16.45}, {'connected_gene': 'MYH13', 'score': 2.56}, {'connected_gene': 'GC17M009941', 'score': 0.34}, {'connected_gene': 'GAS7', 'score': 0.06}]
chr17	GH17I009911	9911128	9913977	0.2	[{'connected_gene': 'PIR60531', 'score': 550.77}, {'connected_gene': 'RCVRN', 'score': 25.91}, {'connected_gene': 'GC17P009918', 'score': 0.44}, {'connected_gene': 'GAS7', 'score': 0.06}]
chr17	GH17I009942	9942840	9944043	0.2	[{'connected_gene': 'GC17M009941', 'score': 550.77}, {'connected_gene': 'RCVRN', 'score': 11.71}, {'connected_gene': 'GC17P009965', 'score': 0.34}, {'connected_gene': 'GAS7', 'score': 0.07}]
chr17	GH17I009906	9905261	9905320	0.5	[{'connected_gene': 'PIR50616', 'score': 550.77}, {'connected_gene': 'RCVRN', 'score': 550.77}, {'connected_gene': 'GC17P009878', 'score': 0.31}]
chr17	GH17I009907	9907729	9909094	0.69	[{'connected_gene': 'PIR50616', 'score': 550.77}, {'connected_gene': 'RCVRN', 'score': 11.85}, {'connected_gene': 'PIR60531', 'score': 0.77}]