PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000371464	[[95351443, 95351869], [95353579, 95353792], [95360149, 95360256], [95360423, 95360560], [95360674, 95360803], [95360927, 95360983]]	[[95351831, 95351869], [95353579, 95353792], [95360149, 95360256], [95360423, 95360560], [95360674, 95360785]]
ENST00000371467	[[95351443, 95351869], [95353579, 95353792], [95360149, 95360256], [95360423, 95360560], [95360674, 95360803], [95361118, 95361420]]	[[95351831, 95351869], [95353579, 95353792], [95360149, 95360256], [95360423, 95360560], [95360674, 95360785]]
ENST00000371469	[[95351645, 95351869], [95353579, 95353792], [95360149, 95360256], [95360423, 95360560], [95360674, 95360728], [95361422, 95361501]]	[[95351831, 95351869], [95353579, 95353792], [95360149, 95360256], [95360423, 95360560], [95360674, 95360728], [95361422, 95361473]]
NM_006744	[[95351592, 95351869], [95353579, 95353792], [95360149, 95360256], [95360423, 95360560], [95360674, 95360803], [95360927, 95360993]]	[[95351831, 95351869], [95353579, 95353792], [95360149, 95360256], [95360423, 95360560], [95360674, 95360785]]
NM_001323517	[[95351592, 95351869], [95353579, 95353792], [95360149, 95360256], [95360423, 95360560], [95360674, 95360803], [95361118, 95361270]]	[[95351831, 95351869], [95353579, 95353792], [95360149, 95360256], [95360423, 95360560], [95360674, 95360785]]
NM_001323518	[[95351592, 95351869], [95353579, 95353792], [95360149, 95360256], [95360423, 95360560], [95360674, 95360728], [95361422, 95361501]]	[[95351831, 95351869], [95353579, 95353792], [95360149, 95360256], [95360423, 95360560], [95360674, 95360728], [95361422, 95361473]]

Promoter

Chrom	Start	End	Description
chr10	95360446	95360509	CAGE_peak_3_at_RBP4_5end
chr10	95360511	95360523	CAGE_peak_9_at_RBP4_5end
chr10	95360526	95360579	CAGE_peak_5_at_RBP4_5end
chr10	95360716	95360741	CAGE_peak_6_at_RBP4_5end
chr10	95360762	95360785	CAGE_peak_4_at_RBP4_5end
chr10	95360793	95360820	CAGE_peak_2_at_RBP4_5end
chr10	95360822	95360833	CAGE_peak_8_at_RBP4_5end
chr10	95360985	95360999	CAGE_peak_1_at_RBP4_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I093591	93591196	93592361	0.54	[{'connected_gene': 'PDE6C', 'score': 12.49}, {'connected_gene': 'FFAR4', 'score': 12.17}, {'connected_gene': 'RBP4', 'score': 7.15}, {'connected_gene': 'GC10P093599', 'score': 0.44}, {'connected_gene': 'GC10P093568', 'score': 0.34}]
chr10	GH10I093572	93572801	93574000	0.38	[{'connected_gene': 'FFAR4', 'score': 10.75}, {'connected_gene': 'RBP4', 'score': 5.88}, {'connected_gene': 'GC10P093568', 'score': 0.44}, {'connected_gene': 'GC10P093599', 'score': 0.31}]
chr10	GH10I093566	93566201	93567492	1.29	[{'connected_gene': 'FFAR4', 'score': 550.77}, {'connected_gene': 'GC10P093568', 'score': 550.77}, {'connected_gene': 'RBP4', 'score': 5.66}]
chr10	GH10I093541	93541958	93543193	1.01	[{'connected_gene': 'FRA10AC1', 'score': 12.17}, {'connected_gene': 'RPL17P34', 'score': 10.4}, {'connected_gene': 'HELLS', 'score': 10.21}, {'connected_gene': 'RBP4', 'score': 5.57}, {'connected_gene': 'GC10M093549', 'score': 0.44}, {'connected_gene': 'RNA5SP323', 'score': 0.29}, {'connected_gene': 'GC10M093511', 'score': 0.29}]
chr10	GH10I093601	93601225	93601284	1.15	[{'connected_gene': 'GC10P093601', 'score': 550.77}, {'connected_gene': 'GC10P093599', 'score': 550.77}, {'connected_gene': 'RBP4', 'score': 550.77}, {'connected_gene': 'FFAR4', 'score': 0.28}]