PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000586895	[[9938567, 9938660], [9939002, 9939069], [9939267, 9939351], [9939512, 9939550], [9940640, 9940790]]	[[9939013, 9939069], [9939267, 9939351], [9939512, 9939550], [9940640, 9940684]]
ENST00000358666	[[9938567, 9938740], [9939002, 9939069], [9939267, 9939351], [9939512, 9939550], [9940640, 9940791]]	[[9939013, 9939069], [9939267, 9939351], [9939512, 9939550], [9940640, 9940684]]
ENST00000590068	[[9938569, 9938619], [9939002, 9939069], [9939267, 9939351], [9939512, 9939550], [9940640, 9940791]]	[[9939013, 9939069], [9939267, 9939351], [9939512, 9939550], [9940640, 9940684]]
ENST00000589960	[[9938571, 9938660], [9939002, 9939069], [9940640, 9940791]]	None
ENST00000593087	[[9938590, 9938660], [9939002, 9939065], [9939512, 9939550], [9940640, 9940789]]	[[9939013, 9939065], [9939512, 9939550], [9940640, 9940661]]
ENST00000588595	[[9938593, 9938660], [9939002, 9939481]]	None
ENST00000588141	[[9938593, 9938660], [9939002, 9939351], [9939512, 9939669]]	None
ENST00000589372	[[9938601, 9938660], [9939002, 9939069], [9939267, 9939351], [9939512, 9940752]]	None
NM_001048241	[[9938555, 9938660], [9939002, 9939069], [9939267, 9939351], [9939512, 9939550], [9940640, 9940797]]	[[9939013, 9939069], [9939267, 9939351], [9939512, 9939550], [9940640, 9940684]]
NM_024292	[[9938567, 9938740], [9939002, 9939069], [9939267, 9939351], [9939512, 9939550], [9940640, 9940797]]	[[9939013, 9939069], [9939267, 9939351], [9939512, 9939550], [9940640, 9940684]]

Promoter

Chrom	Start	End	Description
chr19	9938562	9938627	CAGE_peak_1_at_UBL5_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr19	GH19I009620	9620200	9623442	2.31	[{'connected_gene': 'ZNF561', 'score': 598.73}, {'connected_gene': 'ZNF561-AS1', 'score': 555.3}, {'connected_gene': 'ZNF266', 'score': 40.46}, {'connected_gene': 'KRI1', 'score': 38.78}, {'connected_gene': 'PPAN', 'score': 29.08}, {'connected_gene': 'FBXL12', 'score': 28.21}, {'connected_gene': 'ZNF317', 'score': 27.92}, {'connected_gene': 'ZNF699', 'score': 25.97}, {'connected_gene': 'RAVER1', 'score': 25.91}, {'connected_gene': 'ZNF558', 'score': 25.9}, {'connected_gene': 'DNMT1', 'score': 25.08}, {'connected_gene': 'ZNF121', 'score': 21.31}, {'connected_gene': 'EIF3G', 'score': 15.23}, {'connected_gene': 'LOC100128428', 'score': 13.5}, {'connected_gene': 'ENSG00000269300', 'score': 11.55}, {'connected_gene': 'ZNF846', 'score': 11.09}, {'connected_gene': 'UBL5', 'score': 10.71}, {'connected_gene': 'CDC37', 'score': 10.35}, {'connected_gene': 'ZNF559', 'score': 9.92}, {'connected_gene': 'LOC100419831', 'score': 9.92}, {'connected_gene': 'PIR53474', 'score': 0.37}]
chr19	GH19I009625	9625801	9626201	0.98	[{'connected_gene': 'ZNF846', 'score': 11.1}, {'connected_gene': 'UBL5', 'score': 10.57}, {'connected_gene': 'ZNF561-AS1', 'score': 0.77}, {'connected_gene': 'ZNF561', 'score': 0.77}, {'connected_gene': 'PIR53474', 'score': 0.39}]
chr19	GH19I009826	9826600	9829081	2.01	[{'connected_gene': 'GC19P009829', 'score': 550.77}, {'connected_gene': 'FBXL12', 'score': 550.77}, {'connected_gene': 'UBL5', 'score': 550.77}]
chr19	GH19I009927	9927510	9927774	0.63	[{'connected_gene': 'GC19P009927', 'score': 550.77}, {'connected_gene': 'COL5A3', 'score': 11.87}, {'connected_gene': 'RDH8', 'score': 11.87}, {'connected_gene': 'C19orf66', 'score': 11.53}, {'connected_gene': 'UBL5', 'score': 11.09}, {'connected_gene': 'MRPL4', 'score': 10.24}, {'connected_gene': 'ICAM1', 'score': 10.24}, {'connected_gene': 'OLFM2', 'score': 0.44}]
chr19	GH19I009637	9637162	9637423	0.22	[{'connected_gene': 'PIR53474', 'score': 550.77}, {'connected_gene': 'ZNF846', 'score': 12.52}, {'connected_gene': 'ZNF812P', 'score': 11.23}, {'connected_gene': 'UBL5', 'score': 10.24}, {'connected_gene': 'ZNF559', 'score': 2.02}, {'connected_gene': 'ZNF561-AS1', 'score': 0.37}, {'connected_gene': 'ZNF561', 'score': 0.37}]