PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000245304	[[98086475, 98087038], [98116458, 98121382]]	[[98086724, 98087038], [98116458, 98116696]]
ENST00000476869	[[98086724, 98087038], [98094021, 98094104], [98116458, 98116964]]	[[98086724, 98087038], [98094021, 98094034]]
NM_021033	[[98086474, 98087038], [98116458, 98120252]]	[[98086724, 98087038], [98116458, 98116696]]

Promoter

Chrom	Start	End	Description
chr13	98085967	98085969	CAGE_peak_4_at_RAP2A_5end
chr13	98086408	98086433	CAGE_peak_2_at_RAP2A_5end
chr13	98086445	98086493	CAGE_peak_1_at_RAP2A_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I097543	97543295	97544997	0.2	[{'connected_gene': 'RAP2A', 'score': 6.62}, {'connected_gene': 'LOC105370325', 'score': 0.77}, {'connected_gene': 'GC13P097561', 'score': 0.37}, {'connected_gene': 'LOC105370324', 'score': 0.1}]
chr13	GH13I097736	97736487	97736636	0.2	[{'connected_gene': 'RAP2A', 'score': 6.54}, {'connected_gene': 'LOC105370324', 'score': 0.31}, {'connected_gene': 'RPL7AP61', 'score': 0.1}]
chr13	GH13I097583	97583529	97585089	0.54	[{'connected_gene': 'RAP2A', 'score': 5.73}, {'connected_gene': 'PIR51420', 'score': 0.44}, {'connected_gene': 'GC13P097561', 'score': 0.34}, {'connected_gene': 'LOC105370324', 'score': 0.13}]
chr13	GH13I097368	97368801	97370054	0.89	[{'connected_gene': 'RAP2A', 'score': 12.07}, {'connected_gene': 'MBNL2', 'score': 5.24}, {'connected_gene': 'RNA5SP37', 'score': 0.44}, {'connected_gene': 'GC13M097364', 'score': 0.44}, {'connected_gene': 'GC13P097385', 'score': 0.37}]
chr13	GH13I097371	97371185	97373990	0.38	[{'connected_gene': 'RAP2A', 'score': 11.49}, {'connected_gene': 'MBNL2', 'score': 6.35}, {'connected_gene': 'RNA5SP37', 'score': 0.44}, {'connected_gene': 'GC13M097364', 'score': 0.44}, {'connected_gene': 'GC13P097385', 'score': 0.39}]
chr13	GH13I097366	97366346	97368385	0.97	[{'connected_gene': 'RAP2A', 'score': 12.07}, {'connected_gene': 'MBNL2', 'score': 5.82}, {'connected_gene': 'RNA5SP37', 'score': 0.77}, {'connected_gene': 'GC13M097364', 'score': 0.77}, {'connected_gene': 'GC13P097385', 'score': 0.37}]
chr13	GH13I097429	97429338	97430358	1.26	[{'connected_gene': 'RAP2A', 'score': 4.29}, {'connected_gene': 'MBNL2', 'score': 1.31}, {'connected_gene': 'PIR62272', 'score': 0.77}, {'connected_gene': 'GC13M097429', 'score': 0.77}]
chr13	GH13I097448	97448507	97449169	0.43	[{'connected_gene': 'RAP2A', 'score': 0.39}, {'connected_gene': 'ENSG00000276704', 'score': 0.39}, {'connected_gene': 'PIR43060', 'score': 0.37}]
chr13	GH13I097430	97430546	97436401	2.24	[{'connected_gene': 'RAP2A', 'score': 561.36}, {'connected_gene': 'GC13M097429', 'score': 550.77}, {'connected_gene': 'ENSG00000276573', 'score': 0.77}, {'connected_gene': 'PIR62272', 'score': 0.44}]
chr13	GH13I096993	96993850	96994774	1.24	[{'connected_gene': 'OXGR1', 'score': 567.5}, {'connected_gene': 'GC13P096994', 'score': 550.77}, {'connected_gene': 'RAP2A', 'score': 5.42}, {'connected_gene': 'TULP3P1', 'score': 0.39}, {'connected_gene': 'LINC00359', 'score': 0.39}]
chr13	GH13I097026	97026541	97027533	0.31	[{'connected_gene': 'OXGR1', 'score': 11.57}, {'connected_gene': 'RAP2A', 'score': 7.63}, {'connected_gene': 'GC13P097018', 'score': 0.44}, {'connected_gene': 'GC13M097074', 'score': 0.21}]
chr13	GH13I097019	97019939	97022150	0.31	[{'connected_gene': 'OXGR1', 'score': 25.5}, {'connected_gene': 'RAP2A', 'score': 7.63}, {'connected_gene': 'GC13P097018', 'score': 0.77}, {'connected_gene': 'GC13M097074', 'score': 0.2}]
chr13	GH13I097218	97218962	97221316	1.18	[{'connected_gene': 'MBNL2', 'score': 5.19}, {'connected_gene': 'OXGR1', 'score': 4.7}, {'connected_gene': 'RAP2A', 'score': 1.57}, {'connected_gene': 'GC13P097244', 'score': 0.37}, {'connected_gene': 'PIR38499', 'score': 0.37}, {'connected_gene': 'LINC00456', 'score': 0.26}]
chr13	GH13I097459	97459607	97461389	0.92	[{'connected_gene': 'PIR43060', 'score': 0.44}, {'connected_gene': 'ENSG00000276704', 'score': 0.34}, {'connected_gene': 'RAP2A', 'score': 0.31}]