PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000264497	[[123533782, 123533915], [123534005, 123534083], [123536836, 123536992], [123541855, 123541891], [123541998, 123542224]]	[[123533864, 123533915], [123534005, 123534083], [123536836, 123536992], [123541855, 123541891], [123541998, 123542166]]
NM_001207006	[[123533782, 123534083], [123536836, 123536992], [123541855, 123541891], [123541998, 123542212]]	[[123533981, 123534083], [123536836, 123536992], [123541855, 123541891], [123541998, 123542166]]
NM_021803	[[123533782, 123533915], [123534005, 123534083], [123536836, 123536992], [123541855, 123541891], [123541998, 123542212]]	[[123533864, 123533915], [123534005, 123534083], [123536836, 123536992], [123541855, 123541891], [123541998, 123542166]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I122150	122150129	122153877	1.97	[{'connected_gene': 'KIAA1109', 'score': 571.54}, {'connected_gene': 'ENSG00000273007', 'score': 15.34}, {'connected_gene': 'BBS7', 'score': 14.49}, {'connected_gene': 'IL2', 'score': 6.29}, {'connected_gene': 'IL21', 'score': 1.13}, {'connected_gene': 'RN7SL335P', 'score': 0.21}]
chr4	GH04I122665	122665289	122669691	0.79	[{'connected_gene': 'IL21', 'score': 10.98}, {'connected_gene': 'IL21-AS1', 'score': 10.66}, {'connected_gene': 'FGF2', 'score': 9.84}, {'connected_gene': 'BBS12', 'score': 0.29}]
chr4	GH04I122621	122621056	122621115	0.5	[{'connected_gene': 'IL21', 'score': 550.77}, {'connected_gene': 'IL21-AS1', 'score': 0.77}, {'connected_gene': 'BBS12', 'score': 0.18}]
chr4	GH04I122699	122699786	122700800	1.08	[{'connected_gene': 'BBS12', 'score': 550.77}, {'connected_gene': 'SPATA5', 'score': 15.72}, {'connected_gene': 'EXOSC9', 'score': 12.55}, {'connected_gene': 'ENSG00000237868', 'score': 10.82}, {'connected_gene': 'FGF2', 'score': 10.2}, {'connected_gene': 'IL21-AS1', 'score': 10.11}, {'connected_gene': 'CETN4P', 'score': 6.04}, {'connected_gene': 'IL21', 'score': 0.18}]
chr4	GH04I122688	122688401	122689000	0.46	[{'connected_gene': 'SPATA5', 'score': 15.72}, {'connected_gene': 'EXOSC9', 'score': 12.54}, {'connected_gene': 'ENSG00000237868', 'score': 10.82}, {'connected_gene': 'IL21-AS1', 'score': 9.76}, {'connected_gene': 'BBS12', 'score': 0.39}, {'connected_gene': 'IL21', 'score': 0.2}]
chr4	GH04I122660	122660845	122662154	0.98	[{'connected_gene': 'IL21-AS1', 'score': 11.05}, {'connected_gene': 'BBS12', 'score': 10.6}, {'connected_gene': 'CETN4P', 'score': 10.51}, {'connected_gene': 'FGF2', 'score': 9.84}, {'connected_gene': 'IL21', 'score': 0.26}]
chr4	GH04I122689	122688001	122688035	0.7	[{'connected_gene': 'IL21-AS1', 'score': 9.76}, {'connected_gene': 'BBS12', 'score': 0.39}, {'connected_gene': 'IL21', 'score': 0.2}]