PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000515673	[[141780960, 141789533], [141832297, 141832508], [141847130, 141847227], [141868807, 141868890], [141870454, 141870526], [141888776, 141889027], [142053478, 142053996]]	[[141789414, 141789533], [141832297, 141832508], [141847130, 141847227], [141868807, 141868890], [141870454, 141870526], [141888776, 141889027], [142053478, 142053962]]
ENST00000379512	[[141786724, 141789533], [141832297, 141832508], [141847130, 141847227], [141868807, 141868890], [141870454, 141870526], [141888776, 141889027], [141974819, 141974880]]	[[141789414, 141789533], [141832297, 141832508], [141847130, 141847227], [141868807, 141868890], [141870454, 141870526], [141888776, 141889027], [141974819, 141974880]]
ENST00000306799	[[141786724, 141789533], [141832297, 141832508], [141847130, 141847227], [141868807, 141868890], [141870454, 141870526], [141888902, 141889027], [142053478, 142054616]]	[[141789414, 141789533], [141832297, 141832508], [141847130, 141847227], [141868807, 141868890], [141870454, 141870526], [141888902, 141889027], [142053478, 142053962]]
ENST00000420921	[[141786724, 141789533], [141832297, 141832508], [141847130, 141847227], [141868807, 141868890], [141870454, 141870526], [141888776, 141889027], [141974819, 141974885], [142133947, 142134031]]	[[141789414, 141789533], [141832297, 141832508], [141847130, 141847227], [141868807, 141868890], [141870454, 141870526], [141888776, 141889027], [141974819, 141974880]]
ENST00000507500	[[141832206, 141832508], [141847130, 141847227], [141868807, 141868890], [141870454, 141870526], [141888776, 141889027], [142053478, 142054203]]	[[141832277, 141832508], [141847130, 141847227], [141868807, 141868890], [141870454, 141870526], [141888776, 141889027], [142053478, 142053962]]
ENST00000506101	[[141832297, 141832508], [141847130, 141847227], [141868807, 141868890], [141870454, 141870526], [141888776, 141889027], [141918111, 141918190]]	[[141832297, 141832508], [141847130, 141847227], [141868807, 141868890], [141870454, 141870526], [141888776, 141889004]]
ENST00000515057	[[141865702, 141865964], [141868807, 141868890], [141870454, 141870526], [141888776, 141889024]]	None
NM_020724	[[141786724, 141789533], [141832297, 141832508], [141847130, 141847227], [141868807, 141868890], [141870454, 141870526], [141888776, 141889027], [142053478, 142054616]]	[[141789414, 141789533], [141832297, 141832508], [141847130, 141847227], [141868807, 141868890], [141870454, 141870526], [141888776, 141889027], [142053478, 142053962]]

Promoter

Chrom	Start	End	Description
chr4	142053722	142053729	CAGE_peak_10_at_RNF150_5end
chr4	142053952	142053977	CAGE_peak_2_at_RNF150_5end
chr4	142054424	142054435	CAGE_peak_9_at_RNF150_5end
chr4	142054469	142054497	CAGE_peak_4_at_RNF150_5end
chr4	142054498	142054547	CAGE_peak_3_at_RNF150_5end
chr4	142054563	142054577	CAGE_peak_6_at_RNF150_5end
chr4	142054590	142054648	CAGE_peak_1_at_RNF150_5end
chr4	142054674	142054686	CAGE_peak_7_at_RNF150_5end
chr4	142133987	142133994	CAGE_peak_15_at_RNF150_5end
chr4	142134015	142134022	CAGE_peak_14_at_RNF150_5end
chr4	142134039	142134066	CAGE_peak_5_at_RNF150_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I141131	141131242	141135075	1.95	[{'connected_gene': 'RNF150', 'score': 550.18}, {'connected_gene': 'ZNF330', 'score': 16.35}, {'connected_gene': 'ELMOD2', 'score': 15.32}, {'connected_gene': 'MAML3', 'score': 10.5}, {'connected_gene': 'GC04M141077', 'score': 0.26}, {'connected_gene': 'GC04P141205', 'score': 0.19}]
chr4	GH04I141027	141027844	141028996	0.64	[{'connected_gene': 'RNF150', 'score': 4.7}, {'connected_gene': 'GC04P141077', 'score': 0.25}, {'connected_gene': 'GC04P140945', 'score': 0.18}]
chr4	GH04I141105	141105169	141105239	0.22	[{'connected_gene': 'RNF150', 'score': 2.72}, {'connected_gene': 'GC04M141077', 'score': 0.39}, {'connected_gene': 'GC04P141205', 'score': 0.15}]
chr4	GH04I140880	140880503	140880611	0.22	[{'connected_gene': 'RNF150', 'score': 2.5}, {'connected_gene': 'GC04P140867', 'score': 0.39}, {'connected_gene': 'GC04P140911', 'score': 0.29}]
chr4	GH04I141045	141045847	141047405	0.8	[{'connected_gene': 'RNF150', 'score': 4.11}, {'connected_gene': 'GC04P141077', 'score': 0.29}, {'connected_gene': 'GC04P140945', 'score': 0.15}]
chr4	GH04I140236	140236524	140239677	1.2	[{'connected_gene': 'MAML3', 'score': 12.78}, {'connected_gene': 'RNF150', 'score': 10.35}, {'connected_gene': 'SCOC', 'score': 0.37}]
chr4	GH04I141139	141139802	141141755	0.2	[{'connected_gene': 'ZNF330', 'score': 6.89}, {'connected_gene': 'GC04M141077', 'score': 0.23}, {'connected_gene': 'GC04P141205', 'score': 0.21}, {'connected_gene': 'RNF150', 'score': 0.19}]
chr4	GH04I141143	141143608	141143735	0.22	[{'connected_gene': 'ZNF330', 'score': 6.45}, {'connected_gene': 'GC04M141077', 'score': 0.23}, {'connected_gene': 'GC04P141205', 'score': 0.21}, {'connected_gene': 'RNF150', 'score': 0.2}]
chr4	GH04I140937	140937662	140938805	0.52	[{'connected_gene': 'GC04P140945', 'score': 0.44}, {'connected_gene': 'GC04P140911', 'score': 0.31}, {'connected_gene': 'RNF150', 'score': 0.06}]
chr4	GH04I141020	141020373	141021503	0.38	[{'connected_gene': 'GC04P141077', 'score': 0.22}, {'connected_gene': 'GC04P140945', 'score': 0.18}, {'connected_gene': 'RNF150', 'score': 0.08}]
chr4	GH04I140942	140942827	140944992	0.38	[{'connected_gene': 'GC04P140945', 'score': 550.77}, {'connected_gene': 'GC04P140911', 'score': 0.29}, {'connected_gene': 'RNF150', 'score': 0.06}]
chr4	GH04I141127	141127001	141127200	0.2	[{'connected_gene': 'GC04M141077', 'score': 0.28}, {'connected_gene': 'GC04P141205', 'score': 0.18}, {'connected_gene': 'RNF150', 'score': 0.17}]
chr4	GH04I140863	140863201	140863600	0.2	[{'connected_gene': 'ENSG00000248335', 'score': 10.47}, {'connected_gene': 'GC04P140867', 'score': 0.77}, {'connected_gene': 'GC04P140811', 'score': 0.23}, {'connected_gene': 'RNF150', 'score': 0.05}]
chr4	GH04I141002	141002600	141002801	0.2	[{'connected_gene': 'GC04P140945', 'score': 0.22}, {'connected_gene': 'GC04P141077', 'score': 0.19}, {'connected_gene': 'RNF150', 'score': 0.08}]
chr4	GH04I140976	140976552	140976664	0.34	[{'connected_gene': 'GC04P140945', 'score': 0.29}, {'connected_gene': 'GC04P141077', 'score': 0.15}, {'connected_gene': 'RNF150', 'score': 0.07}]
chr4	GH04I141028	141027559	141027656	0.52	[{'connected_gene': 'GC04P141077', 'score': 0.25}, {'connected_gene': 'GC04P140945', 'score': 0.18}, {'connected_gene': 'RNF150', 'score': 0.09}]
chr4	GH04I141130	141130402	141130999	0.2	[{'connected_gene': 'GC04M141077', 'score': 0.26}, {'connected_gene': 'GC04P141205', 'score': 0.18}, {'connected_gene': 'RNF150', 'score': 0.18}]
chr4	GH04I141058	141058528	141059876	0.2	[{'connected_gene': 'GC04P141077', 'score': 0.37}, {'connected_gene': 'GC04P140945', 'score': 0.14}, {'connected_gene': 'RNF150', 'score': 0.1}]
chr4	GH04I141102	141102387	141102576	0.62	[{'connected_gene': 'GC04M141077', 'score': 0.39}, {'connected_gene': 'GC04P141077', 'score': 0.34}, {'connected_gene': 'GC04P141205', 'score': 0.15}, {'connected_gene': 'RNF150', 'score': 0.14}]
chr4	GH04I140893	140893987	140894136	0.38	[{'connected_gene': 'GC04P140911', 'score': 0.37}, {'connected_gene': 'GC04P140867', 'score': 0.31}, {'connected_gene': 'RNF150', 'score': 0.06}]