PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr2	158182105	158182110	CAGE_peak_6_at_ERMN_5end
chr2	158182255	158182298	CAGE_peak_2_at_ERMN_5end
chr2	158182322	158182358	CAGE_peak_1_at_ERMN_5end
chr2	158182376	158182387	CAGE_peak_3_at_ERMN_5end
chr2	158182410	158182415	CAGE_peak_4_at_ERMN_5end
chr2	158182519	158182525	CAGE_peak_7_at_ERMN_5end
chr2	158184211	158184231	CAGE_peak_5_at_ERMN_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I157410	157410825	157422524	1.58	[{'connected_gene': 'CYTIP', 'score': 33.86}, {'connected_gene': 'ACVR1', 'score': 13.57}, {'connected_gene': 'FAM133DP', 'score': 12.33}, {'connected_gene': 'ERMN', 'score': 11.09}, {'connected_gene': 'GPD2', 'score': 4.14}, {'connected_gene': 'LOC105373711', 'score': 0.39}, {'connected_gene': 'GC02M157436', 'score': 0.29}]
chr2	GH02I157463	157463385	157464928	0.94	[{'connected_gene': 'CYTIP', 'score': 14.31}, {'connected_gene': 'ERMN', 'score': 10.69}, {'connected_gene': 'ACVR1', 'score': 1.15}, {'connected_gene': 'GC02M157436', 'score': 0.37}]
chr2	GH02I157485	157485617	157489507	0.89	[{'connected_gene': 'CYTIP', 'score': 550.77}, {'connected_gene': 'ERMN', 'score': 10.56}, {'connected_gene': 'LOC105373712', 'score': 0.77}, {'connected_gene': 'GC02M157436', 'score': 0.28}]
chr2	GH02I157409	157409010	157409798	0.51	[{'connected_gene': 'CYTIP', 'score': 11.62}, {'connected_gene': 'ERMN', 'score': 10.87}, {'connected_gene': 'LOC105373711', 'score': 0.77}, {'connected_gene': 'GC02M157436', 'score': 0.28}]
chr2	GH02I157345	157345416	157346085	0.31	[{'connected_gene': 'CYTIP', 'score': 10.17}, {'connected_gene': 'GC02M157348', 'score': 0.44}, {'connected_gene': 'ERMN', 'score': 0.37}]
chr2	GH02I157472	157472464	157475139	0.2	[{'connected_gene': 'ERMN', 'score': 10.96}, {'connected_gene': 'CYTIP', 'score': 0.37}, {'connected_gene': 'LOC105373712', 'score': 0.37}, {'connected_gene': 'GC02M157436', 'score': 0.31}]
chr2	GH02I157481	157481966	157483054	0.31	[{'connected_gene': 'ERMN', 'score': 10.46}, {'connected_gene': 'CYTIP', 'score': 0.44}, {'connected_gene': 'LOC105373712', 'score': 0.44}, {'connected_gene': 'GC02M157436', 'score': 0.29}]
chr2	GH02I157476	157476058	157478859	0.63	[{'connected_gene': 'ERMN', 'score': 10.3}, {'connected_gene': 'CYTIP', 'score': 0.39}, {'connected_gene': 'LOC105373712', 'score': 0.39}, {'connected_gene': 'GC02M157436', 'score': 0.31}]
chr2	GH02I157479	157479327	157481194	1.37	[{'connected_gene': 'ERMN', 'score': 10.46}, {'connected_gene': 'ACVR1C', 'score': 1.98}, {'connected_gene': 'CYTIP', 'score': 0.44}, {'connected_gene': 'LOC105373712', 'score': 0.39}, {'connected_gene': 'GC02M157436', 'score': 0.29}]
chr2	GH02I157929	157929421	157931083	1.01	[{'connected_gene': 'ERMN', 'score': 14.52}, {'connected_gene': 'ACVR1C', 'score': 5.38}, {'connected_gene': 'ENSG00000271320', 'score': 0.39}, {'connected_gene': 'GC02P157914', 'score': 0.37}, {'connected_gene': 'GC02M157962', 'score': 0.29}, {'connected_gene': 'UPP2', 'score': 0.23}]
chr2	GH02I157263	157263201	157263600	0.89	[{'connected_gene': 'ERMN', 'score': 10.32}, {'connected_gene': 'GALNT5', 'score': 0.44}, {'connected_gene': 'RN7SKP281', 'score': 0.28}]
chr2	GH02I157304	157304541	157305838	0.51	[{'connected_gene': 'ERMN', 'score': 11.67}, {'connected_gene': 'RN7SKP281', 'score': 0.44}, {'connected_gene': 'GALNT5', 'score': 0.25}]
chr2	GH02I157312	157312858	157316828	0.59	[{'connected_gene': 'ERMN', 'score': 0.39}, {'connected_gene': 'RN7SKP281', 'score': 0.37}, {'connected_gene': 'GALNT5', 'score': 0.22}]
chr2	GH02I157324	157324123	157324863	0.98	[{'connected_gene': 'ERMN', 'score': 0.77}, {'connected_gene': 'RN7SKP281', 'score': 0.31}]
chr2	GH02I157325	157325807	157325866	0.7	[{'connected_gene': 'ERMN', 'score': 550.77}, {'connected_gene': 'RN7SKP281', 'score': 0.31}]
chr2	GH02I157318	157318487	157324062	0.59	[{'connected_gene': 'ERMN', 'score': 0.44}, {'connected_gene': 'RN7SKP281', 'score': 0.34}]
chr2	GH02I157326	157325869	157326098	0.51	[{'connected_gene': 'ERMN', 'score': 550.77}, {'connected_gene': 'RN7SKP281', 'score': 0.31}]
chr2	GH02I157327	157327430	157328568	1.65	[{'connected_gene': 'ERMN', 'score': 550.77}, {'connected_gene': 'GC02M157348', 'score': 0.31}]
chr2	GH02I157331	157331554	157332883	0.4	[{'connected_gene': 'ERMN', 'score': 0.77}, {'connected_gene': 'GC02M157348', 'score': 0.34}]
chr2	GH02I157405	157405487	157407401	0.31	[{'connected_gene': 'LOC105373711', 'score': 550.77}, {'connected_gene': 'CYTIP', 'score': 11.62}, {'connected_gene': 'ERMN', 'score': 11.47}, {'connected_gene': 'GC02M157436', 'score': 0.26}]
chr2	GH02I157402	157402874	157404977	1.15	[{'connected_gene': 'LOC105373711', 'score': 550.77}, {'connected_gene': 'ERMN', 'score': 11.47}, {'connected_gene': 'CYTIP', 'score': 11.2}, {'connected_gene': 'FAM133DP', 'score': 0.34}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000410096	[[158175136, 158178303], [158181181, 158181274], [158181913, 158182446]]	[[158177782, 158178303], [158181181, 158181274], [158181913, 158182154]]
ENST00000397283	[[158175150, 158178303], [158181181, 158181274], [158181913, 158182186], [158183984, 158184225]]	[[158177782, 158178303], [158181181, 158181274], [158181913, 158182186], [158183984, 158183991]]
ENST00000535935	[[158177508, 158178303], [158181181, 158181274], [158181642, 158181750]]	[[158177782, 158178303], [158181181, 158181197]]
ENST00000409395	[[158177508, 158178303], [158181181, 158181274], [158181642, 158181748], [158181913, 158182385]]	[[158181734, 158181748], [158181913, 158182154]]
ENST00000420719	[[158177513, 158178303], [158181181, 158181214], [158181913, 158182336]]	[[158177782, 158178303], [158181181, 158181214], [158181913, 158182154]]
ENST00000420317	[[158178156, 158178303], [158181181, 158181274], [158181913, 158182174], [158183720, 158183760]]	[[158178156, 158178303], [158181181, 158181274], [158181913, 158182154]]
ENST00000411762	[[158178180, 158178303], [158181181, 158181274], [158181913, 158182186], [158183720, 158183821]]	[[158178180, 158178303], [158181181, 158181274], [158181913, 158182154]]
ENST00000409216	[[158178196, 158178303], [158180658, 158180781], [158181181, 158181274], [158181913, 158182336]]	[[158180674, 158180781], [158181181, 158181274], [158181913, 158182154]]
ENST00000409925	[[158178250, 158178303], [158180629, 158180781], [158181181, 158181274], [158181913, 158182171]]	[[158180674, 158180781], [158181181, 158181274], [158181913, 158182154]]
ENST00000419116	[[158178293, 158178303], [158181181, 158181265], [158181913, 158182413]]	[[158178293, 158178303], [158181181, 158181265], [158181913, 158182154]]
NM_020711	[[158175124, 158178303], [158181181, 158181274], [158181913, 158182460]]	[[158177782, 158178303], [158181181, 158181274], [158181913, 158182154]]
NM_001304346	[[158175124, 158178303], [158181181, 158181214], [158181913, 158182460]]	[[158177782, 158178303], [158181181, 158181214], [158181913, 158182154]]
NM_001304345	[[158175124, 158178303], [158181181, 158181274], [158181913, 158182186], [158183720, 158183821]]	[[158177782, 158178303], [158181181, 158181274], [158181913, 158182154]]
NM_001304344	[[158175124, 158178303], [158181181, 158181274], [158181913, 158182174], [158183720, 158183821]]	[[158177782, 158178303], [158181181, 158181274], [158181913, 158182154]]
NM_001009959	[[158175124, 158178303], [158181181, 158181274], [158181913, 158182186], [158183984, 158184225]]	[[158177782, 158178303], [158181181, 158181274], [158181913, 158182186], [158183984, 158183991]]