PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000274747	[[24403152, 24403464], [24405395, 24405469], [24408635, 24408672], [24412449, 24412623], [24415260, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423278], [24423811, 24425809]]	[[24403274, 24403464], [24405395, 24405469], [24408635, 24408672], [24412449, 24412502]]
ENST00000543597	[[24403158, 24403464], [24408635, 24408672], [24409688, 24409801], [24412449, 24412623], [24415243, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423278], [24423811, 24424122]]	[[24418348, 24418464], [24418688, 24418806], [24423164, 24423278], [24423811, 24423922]]
ENST00000535061	[[24403163, 24403464], [24405395, 24405469], [24412449, 24412623], [24415260, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423278], [24423811, 24424251]]	[[24403274, 24403464], [24405395, 24405469], [24412449, 24412623], [24415260, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423278], [24423811, 24423922]]
ENST00000483634	[[24403181, 24403464], [24405395, 24405469], [24408635, 24408672], [24412449, 24412623], [24415260, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24419469]]	None
ENST00000378353	[[24403181, 24403464], [24405395, 24405469], [24408635, 24408672], [24409688, 24409801], [24412449, 24412623], [24415260, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423704]]	[[24403274, 24403464], [24405395, 24405469], [24408635, 24408672], [24409688, 24409801], [24412449, 24412623], [24415260, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423284]]
ENST00000378386	[[24403181, 24403464], [24405395, 24405469], [24408635, 24408672], [24409688, 24409801], [24412449, 24412623], [24415260, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423278], [24423811, 24425810]]	[[24403274, 24403464], [24405395, 24405469], [24408635, 24408672], [24409688, 24409801], [24412449, 24412623], [24415260, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423278], [24423811, 24423922]]
ENST00000443868	[[24403186, 24403464], [24405395, 24405469], [24408635, 24408672], [24409688, 24409801], [24410954, 24411027], [24412513, 24412623], [24415260, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423278], [24423811, 24424067]]	[[24403274, 24403464], [24405395, 24405469], [24408635, 24408672], [24409688, 24409801], [24410954, 24411027], [24412513, 24412623], [24415260, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423278], [24423811, 24423922]]
ENST00000446191	[[24403419, 24403464], [24405395, 24405469], [24408635, 24408672], [24409688, 24409721], [24416638, 24416741], [24418311, 24418464], [24418688, 24418789]]	[[24403419, 24403464], [24405395, 24405469], [24408635, 24408672], [24409688, 24409721], [24416638, 24416741], [24418311, 24418464], [24418688, 24418789]]
NM_001286265	[[24403135, 24403464], [24405395, 24405469], [24408635, 24408672], [24409688, 24409801], [24412449, 24412623], [24415260, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423707]]	[[24403274, 24403464], [24405395, 24405469], [24408635, 24408672], [24409688, 24409801], [24412449, 24412623], [24415260, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423284]]
NR_104423	[[24403135, 24403464], [24408635, 24408672], [24409688, 24409801], [24412449, 24412623], [24415243, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423278], [24423811, 24426422]]	None
NM_001286266	[[24403135, 24403464], [24405395, 24405469], [24412449, 24412623], [24415260, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423278], [24423811, 24426422]]	[[24403274, 24403464], [24405395, 24405469], [24412449, 24412623], [24415260, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423278], [24423811, 24423922]]
NM_020662	[[24403135, 24403464], [24405395, 24405469], [24408635, 24408672], [24409688, 24409801], [24412449, 24412623], [24415260, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423278], [24423811, 24426422]]	[[24403274, 24403464], [24405395, 24405469], [24408635, 24408672], [24409688, 24409801], [24412449, 24412623], [24415260, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423278], [24423811, 24423922]]
NM_001286264	[[24403135, 24403464], [24405395, 24405469], [24408635, 24408672], [24409688, 24409801], [24410954, 24411027], [24412513, 24412623], [24415260, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423278], [24423811, 24426422]]	[[24403274, 24403464], [24405395, 24405469], [24408635, 24408672], [24409688, 24409801], [24410954, 24411027], [24412513, 24412623], [24415260, 24415391], [24416624, 24416741], [24418311, 24418464], [24418688, 24418806], [24423164, 24423278], [24423811, 24423922]]

Promoter

Chrom	Start	End	Description
chr6	24403144	24403224	CAGE_peak_1_at_MRS2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I024399	24399304	24404562	2.26	[{'connected_gene': 'MRS2', 'score': 588.36}, {'connected_gene': 'PIR56278', 'score': 550.77}, {'connected_gene': 'ALDH5A1', 'score': 13.95}, {'connected_gene': 'DCDC2', 'score': 0.37}]
chr6	GH06I024385	24385397	24386213	1.11	[{'connected_gene': 'MRS2', 'score': 5.85}, {'connected_gene': 'DCDC2', 'score': 0.77}]
chr6	GH06I024431	24431133	24431262	0.65	[{'connected_gene': 'MRS2', 'score': 33.46}, {'connected_gene': 'PIR53932', 'score': 0.44}, {'connected_gene': 'GPLD1', 'score': 0.21}, {'connected_gene': 'ALDH5A1', 'score': 0.21}]
chr6	GH06I024427	24427936	24429354	0.84	[{'connected_gene': 'MRS2', 'score': 47.61}, {'connected_gene': 'RNU6-391P', 'score': 10.08}, {'connected_gene': 'PIR53932', 'score': 0.44}, {'connected_gene': 'GPLD1', 'score': 0.2}, {'connected_gene': 'ALDH5A1', 'score': 0.2}]
chr6	GH06I024405	24405201	24405462	0.58	[{'connected_gene': 'MRS2', 'score': 0.77}, {'connected_gene': 'PIR56278', 'score': 0.77}, {'connected_gene': 'PIR53932', 'score': 0.37}]
chr6	GH06I024382	24382062	24384050	1	[{'connected_gene': 'DCDC2', 'score': 550.77}, {'connected_gene': 'MRS2', 'score': 5.92}, {'connected_gene': 'RNU6-391P', 'score': 0.37}]
chr6	GH06I024321	24321514	24324833	1.09	[{'connected_gene': 'DCDC2', 'score': 12.68}, {'connected_gene': 'RNU6-391P', 'score': 11.05}, {'connected_gene': 'MRS2', 'score': 5.56}, {'connected_gene': 'KAAG1', 'score': 5.38}, {'connected_gene': 'ENSG00000251830', 'score': 0.1}]
chr6	GH06I024394	24394624	24395749	0.88	[{'connected_gene': 'RNU6-391P', 'score': 11.35}, {'connected_gene': 'MRS2', 'score': 0.44}, {'connected_gene': 'DCDC2', 'score': 0.39}]
chr6	GH06I024389	24389393	24389522	0.74	[{'connected_gene': 'RNU6-391P', 'score': 12.06}, {'connected_gene': 'DCDC2', 'score': 0.44}, {'connected_gene': 'MRS2', 'score': 0.39}]
chr6	GH06I024359	24359588	24360960	1.18	[{'connected_gene': 'GC06P024361', 'score': 550.77}, {'connected_gene': 'MRS2', 'score': 14.54}, {'connected_gene': 'KAAG1', 'score': 0.77}, {'connected_gene': 'DCDC2', 'score': 0.34}]