PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000009105	[[209757061, 209757277], [209768299, 209768420], [209773327, 209773456], [209776558, 209776633], [209778880, 209779019], [209779664, 209779788], [209781202, 209781278], [209782324, 209782437], [209783195, 209783274], [209784809, 209784897], [209785136, 209785561], [209786129, 209786257], [209786384, 209787283]]	[[209768328, 209768420], [209773327, 209773456], [209776558, 209776633], [209778880, 209779019], [209779664, 209779788], [209781202, 209781278], [209782324, 209782437], [209783195, 209783274], [209784809, 209784897], [209785136, 209785561], [209786129, 209786220]]
ENST00000423146	[[209757073, 209757117], [209768299, 209768420], [209773327, 209773456], [209776558, 209776633], [209778880, 209779019], [209779664, 209779788], [209782324, 209782437], [209783195, 209783258]]	[[209768328, 209768420], [209773327, 209773456], [209776558, 209776633], [209778880, 209779019], [209779664, 209779788], [209782324, 209782437], [209783195, 209783258]]
ENST00000361322	[[209757073, 209757117], [209768299, 209768420], [209773327, 209773456], [209776558, 209776633], [209778880, 209779019], [209779664, 209779788], [209781202, 209781278], [209782324, 209782437], [209783195, 209783274], [209784809, 209784897], [209785136, 209785561], [209786129, 209786257], [209786384, 209787283]]	[[209768328, 209768420], [209773327, 209773456], [209776558, 209776633], [209778880, 209779019], [209779664, 209779788], [209781202, 209781278], [209782324, 209782437], [209783195, 209783274], [209784809, 209784897], [209785136, 209785561], [209786129, 209786220]]
ENST00000494990	[[209781138, 209781278], [209782324, 209782437], [209783195, 209783274], [209784809, 209784897], [209785136, 209785289]]	None
NM_020439	[[209757044, 209757117], [209768299, 209768420], [209773327, 209773456], [209776558, 209776633], [209778880, 209779019], [209779664, 209779788], [209781202, 209781278], [209782324, 209782437], [209783195, 209783274], [209784809, 209784897], [209785136, 209785561], [209786129, 209786257], [209786384, 209787284]]	[[209768328, 209768420], [209773327, 209773456], [209776558, 209776633], [209778880, 209779019], [209779664, 209779788], [209781202, 209781278], [209782324, 209782437], [209783195, 209783274], [209784809, 209784897], [209785136, 209785561], [209786129, 209786220]]

Promoter

Chrom	Start	End	Description
chr1	209757051	209757069	CAGE_peak_1_at_CAMK1G_5end
chr1	209781012	209781050	CAGE_peak_2_at_CAMK1G_5end
chr1	209781070	209781082	CAGE_peak_4_at_CAMK1G_5end
chr1	209781095	209781106	CAGE_peak_5_at_CAMK1G_5end
chr1	209781107	209781115	CAGE_peak_3_at_CAMK1G_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I209634	209634516	209634564	0.2	[{'connected_gene': 'CAMK1G', 'score': 11.24}, {'connected_gene': 'HSD11B1', 'score': 11.01}, {'connected_gene': 'G0S2', 'score': 10.91}, {'connected_gene': 'ENSG00000224260', 'score': 10.86}, {'connected_gene': 'LOC101930114', 'score': 10.77}, {'connected_gene': 'MIR4260', 'score': 0.39}, {'connected_gene': 'LAMB3', 'score': 0.37}]
chr1	GH01I209608	209607056	209607205	0.4	[{'connected_gene': 'CAMK1G', 'score': 11.28}, {'connected_gene': 'ENSG00000224260', 'score': 10.72}, {'connected_gene': 'HSD11B1', 'score': 10.3}, {'connected_gene': 'MIR4260', 'score': 0.37}]
chr1	GH01I209583	209583509	209584446	1.39	[{'connected_gene': 'CAMK1G', 'score': 555.42}, {'connected_gene': 'MIR4260', 'score': 0.28}]
chr1	GH01I209667	209667819	209668262	0.95	[{'connected_gene': 'G0S2', 'score': 39.16}, {'connected_gene': 'CAMK1G', 'score': 10.68}, {'connected_gene': 'ENSG00000224260', 'score': 10.34}, {'connected_gene': 'LAMB3', 'score': 6.05}, {'connected_gene': 'TRAF3IP3', 'score': 4.48}, {'connected_gene': 'C1orf74', 'score': 2.13}, {'connected_gene': 'LOC101930114', 'score': 0.17}]
chr1	GH01I209641	209641133	209644528	1.12	[{'connected_gene': 'G0S2', 'score': 16.09}, {'connected_gene': 'LAMB3', 'score': 13.07}, {'connected_gene': 'HSD11B1', 'score': 11.12}, {'connected_gene': 'LOC101930114', 'score': 10.81}, {'connected_gene': 'CAMK1G', 'score': 10.74}, {'connected_gene': 'ENSG00000224260', 'score': 10.51}, {'connected_gene': 'MIR4260', 'score': 0.37}]
chr1	GH01I209633	209633399	209633612	0.79	[{'connected_gene': 'LAMB3', 'score': 19.88}, {'connected_gene': 'G0S2', 'score': 19.21}, {'connected_gene': 'CAMK1G', 'score': 11.25}, {'connected_gene': 'HSD11B1', 'score': 11.01}, {'connected_gene': 'ENSG00000224260', 'score': 10.86}, {'connected_gene': 'LOC101930114', 'score': 10.77}, {'connected_gene': 'MIR4260', 'score': 0.44}]
chr1	GH01I209644	209644708	209661280	2.3	[{'connected_gene': 'LAMB3', 'score': 590.96}, {'connected_gene': 'G0S2', 'score': 52.04}, {'connected_gene': 'HSD11B1', 'score': 12.49}, {'connected_gene': 'LOC101930114', 'score': 11.08}, {'connected_gene': 'CAMK1G', 'score': 10.62}, {'connected_gene': 'ENSG00000224260', 'score': 10.48}, {'connected_gene': 'MIR205HG', 'score': 9.28}, {'connected_gene': 'MIR205', 'score': 9.28}, {'connected_gene': 'IRF6', 'score': 6.36}, {'connected_gene': 'TRAF3IP3', 'score': 3.57}, {'connected_gene': 'C1orf74', 'score': 1.27}]
chr1	GH01I209585	209585601	209586088	0.69	[{'connected_gene': 'HSD11B1', 'score': 10.46}, {'connected_gene': 'ENSG00000224260', 'score': 6.17}, {'connected_gene': 'CAMK1G', 'score': 0.77}, {'connected_gene': 'MIR4260', 'score': 0.28}]
chr1	GH01I209587	209587876	209588025	0.85	[{'connected_gene': 'HSD11B1', 'score': 10.33}, {'connected_gene': 'CAMK1G', 'score': 0.77}, {'connected_gene': 'MIR4260', 'score': 0.28}]
chr1	GH01I209616	209616353	209616465	0.4	[{'connected_gene': 'HSD11B1', 'score': 10.34}, {'connected_gene': 'MIR4260', 'score': 0.44}, {'connected_gene': 'CAMK1G', 'score': 0.29}, {'connected_gene': 'LAMB3', 'score': 0.28}]
chr1	GH01I209619	209617336	209617485	0.4	[{'connected_gene': 'HSD11B1', 'score': 10.34}, {'connected_gene': 'MIR4260', 'score': 0.44}, {'connected_gene': 'CAMK1G', 'score': 0.29}, {'connected_gene': 'LAMB3', 'score': 0.28}]
chr1	GH01I209622	209616676	209616825	0.51	[{'connected_gene': 'HSD11B1', 'score': 10.34}, {'connected_gene': 'MIR4260', 'score': 0.44}, {'connected_gene': 'CAMK1G', 'score': 0.29}, {'connected_gene': 'LAMB3', 'score': 0.28}]
chr1	GH01I209617	209616876	209617025	0.51	[{'connected_gene': 'HSD11B1', 'score': 10.34}, {'connected_gene': 'MIR4260', 'score': 0.44}, {'connected_gene': 'CAMK1G', 'score': 0.29}, {'connected_gene': 'LAMB3', 'score': 0.28}]
chr1	GH01I209741	209741974	209743380	0.8	[{'connected_gene': 'ADORA2BP1', 'score': 550.77}, {'connected_gene': 'GC01P209745', 'score': 550.77}, {'connected_gene': 'HSD11B1', 'score': 10.93}, {'connected_gene': 'CAMK1G', 'score': 10.76}, {'connected_gene': 'ENSG00000224260', 'score': 10.57}, {'connected_gene': 'TRAF3IP3', 'score': 8.67}, {'connected_gene': 'LOC101930114', 'score': 0.39}]
chr1	GH01I209576	209576836	209576985	0.76	[{'connected_gene': 'LOC105372899', 'score': 0.44}, {'connected_gene': 'CAMK1G', 'score': 0.44}]
chr1	GH01I209569	209569556	209570000	0.82	[{'connected_gene': 'LOC105372899', 'score': 550.77}, {'connected_gene': 'CAMK1G', 'score': 0.39}]
chr1	GH01I209607	209607400	209608545	1.06	[{'connected_gene': 'ENSG00000224260', 'score': 17.34}, {'connected_gene': 'CAMK1G', 'score': 15.5}, {'connected_gene': 'HSD11B1', 'score': 10.83}, {'connected_gene': 'G0S2', 'score': 10.29}, {'connected_gene': 'LOC101930114', 'score': 10.2}, {'connected_gene': 'MIR4260', 'score': 0.37}]
chr1	GH01I209692	209692640	209693645	0.98	[{'connected_gene': 'ENSG00000224260', 'score': 11.08}, {'connected_gene': 'CAMK1G', 'score': 10.25}, {'connected_gene': 'HSD11B1', 'score': 0.44}, {'connected_gene': 'ADORA2BP1', 'score': 0.23}, {'connected_gene': 'LOC101930114', 'score': 0.21}]
chr1	GH01I209620	209620260	209622653	0.9	[{'connected_gene': 'ENSG00000224260', 'score': 10.49}, {'connected_gene': 'LAMB3', 'score': 4.79}, {'connected_gene': 'MIR4260', 'score': 0.77}, {'connected_gene': 'CAMK1G', 'score': 0.28}]
chr1	GH01I209593	209593088	209593574	0.23	[{'connected_gene': 'ENSG00000224260', 'score': 34.22}, {'connected_gene': 'HSD11B1', 'score': 10.32}, {'connected_gene': 'CAMK1G', 'score': 1.95}, {'connected_gene': 'MIR4260', 'score': 0.29}]
chr1	GH01I209599	209599651	209600938	0.31	[{'connected_gene': 'ENSG00000224260', 'score': 21.56}, {'connected_gene': 'HSD11B1', 'score': 10.89}, {'connected_gene': 'G0S2', 'score': 10.8}, {'connected_gene': 'LOC101930114', 'score': 10.72}, {'connected_gene': 'CAMK1G', 'score': 4.61}, {'connected_gene': 'MIR4260', 'score': 0.34}]
chr1	GH01I209621	209617896	209618045	0.63	[{'connected_gene': 'ENSG00000224260', 'score': 11.11}, {'connected_gene': 'HSD11B1', 'score': 10.65}, {'connected_gene': 'MIR4260', 'score': 0.44}, {'connected_gene': 'CAMK1G', 'score': 0.29}, {'connected_gene': 'LAMB3', 'score': 0.29}]
chr1	GH01I209609	209609976	209610025	0.66	[{'connected_gene': 'ENSG00000224260', 'score': 10.95}, {'connected_gene': 'HSD11B1', 'score': 10.42}, {'connected_gene': 'MIR4260', 'score': 0.39}, {'connected_gene': 'CAMK1G', 'score': 0.31}]
chr1	GH01I209618	209618297	209619537	0.51	[{'connected_gene': 'ENSG00000224260', 'score': 11.11}, {'connected_gene': 'HSD11B1', 'score': 10.65}, {'connected_gene': 'MIR4260', 'score': 0.77}, {'connected_gene': 'LAMB3', 'score': 0.29}, {'connected_gene': 'CAMK1G', 'score': 0.28}]
chr1	GH01I209567	209567836	209567985	0.38	[{'connected_gene': 'ENSG00000224260', 'score': 558.9}, {'connected_gene': 'LOC105372899', 'score': 550.77}, {'connected_gene': 'CAMK1G', 'score': 0.37}]
chr1	GH01I209688	209688276	209689820	0.94	[{'connected_gene': 'ENSG00000224260', 'score': 11.08}, {'connected_gene': 'LOC101930114', 'score': 10.7}, {'connected_gene': 'CAMK1G', 'score': 10.35}, {'connected_gene': 'DIEXF', 'score': 5.22}, {'connected_gene': 'HSD11B1', 'score': 0.77}, {'connected_gene': 'ADORA2BP1', 'score': 0.22}]