PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000369037	[[107473760, 107475981], [107515025, 107515058], [107531642, 107531774], [107533312, 107533486], [107566751, 107566823], [107595232, 107595431], [107655401, 107655536], [107780193, 107780767]]	[[107475822, 107475981], [107515025, 107515058], [107531642, 107531774], [107533312, 107533486], [107566751, 107566823], [107595232, 107595431], [107655401, 107655536], [107780193, 107780489]]
ENST00000453874	[[107475649, 107475981], [107515025, 107515058], [107566751, 107566823], [107595232, 107595431], [107655401, 107655536], [107780193, 107780760]]	[[107475822, 107475981], [107515025, 107515058], [107566751, 107566823], [107595232, 107595431], [107655401, 107655536], [107780193, 107780489]]
ENST00000369031	[[107585389, 107585716], [107595232, 107595431], [107655401, 107655536], [107780193, 107780768]]	[[107585623, 107585716], [107595232, 107595431], [107655401, 107655536], [107780193, 107780489]]
ENST00000449027	[[107519044, 107519102], [107531642, 107531774], [107533312, 107533363]]	[[107519044, 107519102], [107531642, 107531774], [107533312, 107533363]]
NM_020381	[[107473760, 107475981], [107515025, 107515058], [107531642, 107531774], [107533312, 107533486], [107566751, 107566823], [107595232, 107595431], [107655401, 107655536], [107780193, 107780779]]	[[107475822, 107475981], [107515025, 107515058], [107531642, 107531774], [107533312, 107533486], [107566751, 107566823], [107595232, 107595431], [107655401, 107655536], [107780193, 107780489]]

Promoter

Chrom	Start	End	Description
chr6	107780574	107780581	CAGE_peak_7_at_PDSS2_5end
chr6	107780625	107780638	CAGE_peak_4_at_PDSS2_5end
chr6	107780670	107780691	CAGE_peak_3_at_PDSS2_5end
chr6	107780708	107780748	CAGE_peak_2_at_PDSS2_5end
chr6	107780751	107780786	CAGE_peak_1_at_PDSS2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I107453	107453649	107454067	0.43	[{'connected_gene': 'BEND3', 'score': 1.26}, {'connected_gene': 'PIR39325', 'score': 0.77}, {'connected_gene': 'PDSS2', 'score': 0.44}, {'connected_gene': 'GC06P107406', 'score': 0.25}]
chr6	GH06I107458	107458400	107460652	2.09	[{'connected_gene': 'PDSS2', 'score': 550.77}, {'connected_gene': 'PIR39325', 'score': 550.77}, {'connected_gene': 'SOBP', 'score': 5.56}]
chr6	GH06I107151	107151691	107155118	0.73	[{'connected_gene': 'PDSS2', 'score': 6.5}, {'connected_gene': 'RNU6-1299P', 'score': 0.34}, {'connected_gene': 'ENSG00000276620', 'score': 0.28}]
chr6	GH06I107437	107437173	107438640	0.2	[{'connected_gene': 'PDSS2', 'score': 12.79}, {'connected_gene': 'PIR39325', 'score': 0.34}, {'connected_gene': 'GC06P107406', 'score': 0.29}]
chr6	GH06I107220	107220877	107222158	0.67	[{'connected_gene': 'PDSS2', 'score': 8.42}, {'connected_gene': 'GC06M107226', 'score': 0.77}, {'connected_gene': 'ENSG00000276620', 'score': 0.31}]
chr6	GH06I107202	107202917	107203066	0.52	[{'connected_gene': 'PDSS2', 'score': 4.83}, {'connected_gene': 'ENSG00000276620', 'score': 0.39}, {'connected_gene': 'GC06M107226', 'score': 0.34}]
chr6	GH06I107241	107241066	107242852	0.96	[{'connected_gene': 'SOBP', 'score': 7.74}, {'connected_gene': 'PDSS2', 'score': 4.6}, {'connected_gene': 'GC06P107237', 'score': 0.77}, {'connected_gene': 'GC06P107246', 'score': 0.77}]
chr6	GH06I107452	107452129	107452198	0.23	[{'connected_gene': 'SOBP', 'score': 1.9}, {'connected_gene': 'PDSS2', 'score': 0.44}, {'connected_gene': 'PIR39325', 'score': 0.44}, {'connected_gene': 'GC06P107406', 'score': 0.25}]
chr6	GH06I107488	107488477	107496399	2.44	[{'connected_gene': 'SOBP', 'score': 556.02}, {'connected_gene': 'PDSS2', 'score': 10.74}, {'connected_gene': 'ENSG00000234206', 'score': 0.37}, {'connected_gene': 'GC06M107466', 'score': 0.34}]
chr6	GH06I107318	107318200	107318401	0.72	[{'connected_gene': 'SOBP', 'score': 4.62}, {'connected_gene': 'GC06P107268', 'score': 0.25}, {'connected_gene': 'PIR39423', 'score': 0.22}, {'connected_gene': 'PDSS2', 'score': 0.11}]
chr6	GH06I107290	107290577	107290928	0.52	[{'connected_gene': 'SOBP', 'score': 5.8}, {'connected_gene': 'GC06P107268', 'score': 0.34}, {'connected_gene': 'PIR39423', 'score': 0.18}, {'connected_gene': 'PDSS2', 'score': 0.1}]
chr6	GH06I107329	107329995	107331139	0.56	[{'connected_gene': 'SOBP', 'score': 13.08}, {'connected_gene': 'LINC02526', 'score': 4.82}, {'connected_gene': 'PIR39423', 'score': 0.26}, {'connected_gene': 'GC06P107268', 'score': 0.21}, {'connected_gene': 'PDSS2', 'score': 0.13}]
chr6	GH06I107812	107812445	107812794	0.33	[{'connected_gene': 'SCML4', 'score': 12.47}, {'connected_gene': 'PDSS2', 'score': 1.87}, {'connected_gene': 'ENSG00000280135', 'score': 0.14}]
chr6	GH06I107211	107211721	107212747	0.77	[{'connected_gene': 'GC06M107226', 'score': 0.39}, {'connected_gene': 'ENSG00000276620', 'score': 0.37}, {'connected_gene': 'PDSS2', 'score': 0.07}]
chr6	GH06I107264	107264417	107264506	0.88	[{'connected_gene': 'GC06M107263', 'score': 550.77}, {'connected_gene': 'GC06P107268', 'score': 0.77}, {'connected_gene': 'PDSS2', 'score': 0.08}]
chr6	GH06I107300	107300587	107300971	0.22	[{'connected_gene': 'GC06P107268', 'score': 0.29}, {'connected_gene': 'PIR39423', 'score': 0.19}, {'connected_gene': 'PDSS2', 'score': 0.1}]
chr6	GH06I107274	107274952	107276119	0.92	[{'connected_gene': 'GC06P107268', 'score': 0.44}, {'connected_gene': 'PIR39423', 'score': 0.15}, {'connected_gene': 'PDSS2', 'score': 0.09}]
chr6	GH06I107323	107323517	107323646	0.2	[{'connected_gene': 'PIR39423', 'score': 0.23}, {'connected_gene': 'GC06P107268', 'score': 0.22}, {'connected_gene': 'PDSS2', 'score': 0.12}]
chr6	GH06I107362	107362057	107362226	0.69	[{'connected_gene': 'PIR39423', 'score': 0.39}, {'connected_gene': 'GC06P107268', 'score': 0.16}, {'connected_gene': 'PDSS2', 'score': 0.15}]
chr6	GH06I107304	107304237	107305079	0.38	[{'connected_gene': 'GC06P107268', 'score': 0.28}, {'connected_gene': 'PIR39423', 'score': 0.2}, {'connected_gene': 'PDSS2', 'score': 0.1}]