PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000265260	[[101292938, 101293123], [101298633, 101298848], [101304280, 101304355], [101309058, 101309114], [101311470, 101313281]]	[[101293059, 101293123], [101298633, 101298848], [101304280, 101304355], [101309058, 101309114], [101311470, 101311597]]
ENST00000498274	[[101293029, 101293123], [101298432, 101298848], [101304280, 101304355], [101309058, 101309114], [101311470, 101311615]]	[[101293059, 101293123], [101298432, 101298491]]
ENST00000460231	[[101293033, 101293123], [101298685, 101298848], [101304280, 101304355], [101309058, 101309114], [101311470, 101313251]]	[[101293059, 101293123], [101298685, 101298795]]
ENST00000469941	[[101293037, 101293123], [101304280, 101304355], [101309058, 101309114], [101311470, 101313281]]	[[101309073, 101309114], [101311470, 101311597]]
ENST00000296024	[[101293039, 101293123], [101298633, 101298848], [101304280, 101304355], [101311470, 101313279]]	[[101293059, 101293123], [101298633, 101298848], [101304280, 101304355], [101311470, 101311509]]
ENST00000486406	[[101293062, 101293123], [101309058, 101309114], [101311470, 101312095]]	None
ENST00000470490	[[101293684, 101293777], [101298633, 101298848], [101304280, 101304355], [101309058, 101309114], [101311470, 101311620]]	None
ENST00000465366	[[101308592, 101309114], [101311470, 101311719]]	None
NR_135231	[[101292937, 101293123], [101309058, 101309114], [101311470, 101313309]]	None
NR_135224	[[101292937, 101293123], [101304280, 101304355], [101309058, 101309114], [101311470, 101313309]]	None
NR_135226	[[101292937, 101293123], [101298685, 101298848], [101311470, 101313309]]	None
NR_135230	[[101292937, 101293123], [101298685, 101298848], [101309058, 101309114], [101311470, 101313309]]	None
NR_135225	[[101292937, 101293123], [101298685, 101298848], [101304283, 101304355], [101309058, 101309114], [101311470, 101313309]]	None
NR_135228	[[101292937, 101293123], [101298685, 101298848], [101304280, 101304355], [101311470, 101313309]]	None
NR_135223	[[101292937, 101293123], [101298685, 101298848], [101304280, 101304355], [101309058, 101309114], [101311470, 101313309]]	None
NM_001320397	[[101292937, 101293123], [101298633, 101298795], [101304326, 101304355], [101309058, 101309114], [101311470, 101313309]]	[[101293059, 101293123], [101298633, 101298795], [101304326, 101304355], [101309058, 101309114], [101311470, 101311597]]
NM_001320400	[[101292937, 101293123], [101298633, 101298848], [101311470, 101313309]]	[[101293059, 101293123], [101298633, 101298848], [101311470, 101311509]]
NM_001320401	[[101292937, 101293123], [101298633, 101298848], [101309058, 101309114], [101311470, 101313309]]	[[101293059, 101293123], [101298633, 101298848], [101309058, 101309114], [101311470, 101311597]]
NM_001320398	[[101292937, 101293123], [101298633, 101298848], [101304283, 101304355], [101309058, 101309114], [101311470, 101313309]]	[[101293059, 101293123], [101298633, 101298848], [101304283, 101304355], [101309058, 101309114], [101311470, 101311597]]
NM_001320395	[[101292937, 101293123], [101298633, 101298848], [101304280, 101304355], [101311470, 101313309]]	[[101293059, 101293123], [101298633, 101298848], [101304280, 101304355], [101311470, 101311509]]
NM_020357	[[101292937, 101293123], [101298633, 101298848], [101304280, 101304355], [101309058, 101309114], [101311470, 101313309]]	[[101293059, 101293123], [101298633, 101298848], [101304280, 101304355], [101309058, 101309114], [101311470, 101311597]]
NM_001320399	[[101292937, 101293123], [101298432, 101298610], [101298685, 101298848], [101304280, 101304355], [101309058, 101309114], [101311470, 101313309]]	[[101298554, 101298610], [101298685, 101298848], [101304280, 101304355], [101309058, 101309114], [101311470, 101311597]]
NR_135227	[[101292937, 101293123], [101298432, 101298848], [101304280, 101304355], [101309058, 101309114], [101311470, 101313309]]	None
NR_135232	[[101292937, 101293123], [101295543, 101295638], [101298685, 101298848], [101304280, 101304355], [101309058, 101309114], [101311470, 101313309]]	None
NR_135229	[[101292937, 101293123], [101295294, 101295638], [101304280, 101304355], [101309058, 101309114], [101311470, 101313309]]	None

Promoter

Chrom	Start	End	Description
chr3	101293001	101293063	CAGE_peak_1_at_PCNP_5end
chr3	101312151	101312169	CAGE_peak_2_at_PCNP_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I101572	101572698	101576125	2.08	[{'connected_gene': 'PCNP', 'score': 561.62}, {'connected_gene': 'NXPE3', 'score': 13.97}, {'connected_gene': 'SENP7', 'score': 13.41}, {'connected_gene': 'ZBTB11-AS1', 'score': 11.49}, {'connected_gene': 'RPS18P5', 'score': 0.77}]
chr3	GH03I101560	101560917	101563207	2.03	[{'connected_gene': 'TRMT10C', 'score': 550.77}, {'connected_gene': 'SENP7', 'score': 24.84}, {'connected_gene': 'NXPE3', 'score': 12.77}, {'connected_gene': 'RPL24', 'score': 10.09}, {'connected_gene': 'ZBTB11-AS1', 'score': 9.68}, {'connected_gene': 'IMPG2', 'score': 5.85}, {'connected_gene': 'PDCL3P4', 'score': 5.1}, {'connected_gene': 'PCNP', 'score': 0.39}]
chr3	GH03I101683	101683221	101688387	2.37	[{'connected_gene': 'RPL24', 'score': 574.35}, {'connected_gene': 'LOC105374013', 'score': 550.77}, {'connected_gene': 'GC03P101686', 'score': 550.77}, {'connected_gene': 'ZBTB11-AS1', 'score': 42.56}, {'connected_gene': 'SENP7', 'score': 34.15}, {'connected_gene': 'RPS18P5', 'score': 26.94}, {'connected_gene': 'ZNF90P1', 'score': 19.03}, {'connected_gene': 'ZBTB11', 'score': 16.4}, {'connected_gene': 'TFG', 'score': 10.71}, {'connected_gene': 'PDCL3P4', 'score': 10.62}, {'connected_gene': 'NXPE3', 'score': 10.2}, {'connected_gene': 'PCNP', 'score': 2.81}, {'connected_gene': 'TRMT10C', 'score': 1.36}, {'connected_gene': 'NFKBIZ', 'score': 1.32}]