PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000254803	[[71554195, 71556267]]	[[71554394, 71555834]]
NM_020368	[[71554195, 71556268]]	[[71554394, 71555834]]

Promoter

Chrom	Start	End	Description
chr4	71554233	71554273	CAGE_peak_1_at_UTP3_5end
chr4	71554504	71554519	CAGE_peak_2_at_UTP3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I070947	70947201	70947800	0.2	[{'connected_gene': 'MOB1B', 'score': 12.2}, {'connected_gene': 'UTP3', 'score': 10.05}, {'connected_gene': 'JCHAIN', 'score': 10.04}, {'connected_gene': 'DCK', 'score': 4.36}]
chr4	GH04I070948	70948801	70949000	0.31	[{'connected_gene': 'MOB1B', 'score': 12.2}, {'connected_gene': 'UTP3', 'score': 10.05}, {'connected_gene': 'JCHAIN', 'score': 10.04}, {'connected_gene': 'DCK', 'score': 0.26}]
chr4	GH04I070901	70901526	70904540	2.36	[{'connected_gene': 'MOB1B', 'score': 567.62}, {'connected_gene': 'DCK', 'score': 11.9}, {'connected_gene': 'GRSF1', 'score': 11.85}, {'connected_gene': 'UTP3', 'score': 10.35}, {'connected_gene': 'JCHAIN', 'score': 10.35}]
chr4	GH04I070721	70721344	70723203	1.88	[{'connected_gene': 'RUFY3', 'score': 563.9}, {'connected_gene': 'UTP3', 'score': 11.44}, {'connected_gene': 'JCHAIN', 'score': 11.4}, {'connected_gene': 'ENSG00000272986', 'score': 0.37}, {'connected_gene': 'PIR34937', 'score': 0.26}]
chr4	GH04I070733	70733285	70738078	2.28	[{'connected_gene': 'RUFY3', 'score': 576.96}, {'connected_gene': 'RNU6-784P', 'score': 13.43}, {'connected_gene': 'RNU6-520P', 'score': 13.43}, {'connected_gene': 'UTP3', 'score': 11.24}, {'connected_gene': 'JCHAIN', 'score': 11.23}, {'connected_gene': 'PIR34937', 'score': 0.31}, {'connected_gene': 'ENSG00000272986', 'score': 0.29}]
chr4	GH04I070927	70927023	70928233	0.79	[{'connected_gene': 'UTP3', 'score': 10.59}, {'connected_gene': 'JCHAIN', 'score': 10.59}, {'connected_gene': 'MOB1B', 'score': 6.33}, {'connected_gene': 'DCK', 'score': 0.21}]
chr4	GH04I070723	70723801	70724000	0.38	[{'connected_gene': 'UTP3', 'score': 11.42}, {'connected_gene': 'JCHAIN', 'score': 11.4}, {'connected_gene': 'RUFY3', 'score': 0.37}, {'connected_gene': 'ENSG00000272986', 'score': 0.37}, {'connected_gene': 'PIR34937', 'score': 0.28}]
chr4	GH04I070740	70740063	70741182	0.49	[{'connected_gene': 'UTP3', 'score': 11.05}, {'connected_gene': 'JCHAIN', 'score': 11.04}, {'connected_gene': 'PIR34937', 'score': 0.34}, {'connected_gene': 'RUFY3', 'score': 0.28}, {'connected_gene': 'ENSG00000272986', 'score': 0.28}]
chr4	GH04I070738	70738778	70739882	0.59	[{'connected_gene': 'UTP3', 'score': 11.05}, {'connected_gene': 'JCHAIN', 'score': 11.04}, {'connected_gene': 'PIR34937', 'score': 0.34}, {'connected_gene': 'ENSG00000272986', 'score': 0.29}, {'connected_gene': 'RUFY3', 'score': 0.28}]
chr4	GH04I070769	70769190	70769440	0.2	[{'connected_gene': 'UTP3', 'score': 10.82}, {'connected_gene': 'JCHAIN', 'score': 10.81}, {'connected_gene': 'PIR34937', 'score': 0.44}, {'connected_gene': 'RUFY3', 'score': 0.2}, {'connected_gene': 'GC04P070840', 'score': 0.19}]
chr4	GH04I071008	71008317	71009075	0.2	[{'connected_gene': 'UTP3', 'score': 11.0}, {'connected_gene': 'JCHAIN', 'score': 11.0}, {'connected_gene': 'DCK', 'score': 5.05}, {'connected_gene': 'MOB1B', 'score': 0.14}, {'connected_gene': 'GC04M071034', 'score': 0.1}]
chr4	GH04I071003	71003259	71007942	0.88	[{'connected_gene': 'UTP3', 'score': 11.0}, {'connected_gene': 'JCHAIN', 'score': 11.0}, {'connected_gene': 'DCK', 'score': 4.57}, {'connected_gene': 'RUFY3', 'score': 4.48}, {'connected_gene': 'MOB1B', 'score': 0.15}, {'connected_gene': 'GC04M071034', 'score': 0.1}]
chr4	GH04I071025	71025565	71026879	0.66	[{'connected_gene': 'UTP3', 'score': 10.23}, {'connected_gene': 'JCHAIN', 'score': 10.22}, {'connected_gene': 'DCK', 'score': 4.98}, {'connected_gene': 'GC04M071034', 'score': 0.12}]
chr4	GH04I070687	70687075	70690061	2.13	[{'connected_gene': 'UTP3', 'score': 561.46}, {'connected_gene': 'GC04P070702', 'score': 0.39}]
chr4	GH04I070957	70957887	70959530	0.2	[{'connected_gene': 'JCHAIN', 'score': 10.18}, {'connected_gene': 'UTP3', 'score': 10.18}, {'connected_gene': 'DCK', 'score': 6.2}, {'connected_gene': 'RUFY3', 'score': 5.72}, {'connected_gene': 'MOB1B', 'score': 0.22}]
chr4	GH04I070759	70759134	70759800	0.49	[{'connected_gene': 'JCHAIN', 'score': 10.75}, {'connected_gene': 'UTP3', 'score': 10.55}, {'connected_gene': 'DCK', 'score': 5.61}, {'connected_gene': 'PIR34937', 'score': 0.77}, {'connected_gene': 'ENSG00000272986', 'score': 0.23}, {'connected_gene': 'RUFY3', 'score': 0.22}]
chr4	GH04I071067	71067484	71067613	0.8	[{'connected_gene': 'JCHAIN', 'score': 10.12}, {'connected_gene': 'UTP3', 'score': 9.63}, {'connected_gene': 'DCK', 'score': 0.18}, {'connected_gene': 'GC04M071034', 'score': 0.16}]
chr4	GH04I070613	70613601	70614200	0.59	[{'connected_gene': 'JCHAIN', 'score': 10.42}, {'connected_gene': 'UTP3', 'score': 10.29}, {'connected_gene': 'ENAM', 'score': 0.39}, {'connected_gene': 'AMBN', 'score': 0.34}]
chr4	GH04I070637	70637244	70637804	0.46	[{'connected_gene': 'JCHAIN', 'score': 11.19}, {'connected_gene': 'UTP3', 'score': 11.02}, {'connected_gene': 'ENAM', 'score': 0.44}, {'connected_gene': 'LOC101927297', 'score': 0.26}]
chr4	GH04I070652	70652001	70652200	0.52	[{'connected_gene': 'JCHAIN', 'score': 11.98}, {'connected_gene': 'UTP3', 'score': 11.82}, {'connected_gene': 'ENAM', 'score': 0.34}, {'connected_gene': 'LOC101927297', 'score': 0.31}]
chr4	GH04I070682	70682864	70683553	0.2	[{'connected_gene': 'JCHAIN', 'score': 550.77}, {'connected_gene': 'LOC101927297', 'score': 0.77}, {'connected_gene': 'UTP3', 'score': 0.44}, {'connected_gene': 'ENAM', 'score': 0.23}]
chr4	GH04I070836	70836827	70840640	2.01	[{'connected_gene': 'GRSF1', 'score': 550.77}, {'connected_gene': 'GC04P070840', 'score': 550.77}, {'connected_gene': 'UTP3', 'score': 10.1}, {'connected_gene': 'JCHAIN', 'score': 10.1}, {'connected_gene': 'RUFY3', 'score': 8.35}, {'connected_gene': 'DCK', 'score': 5.96}, {'connected_gene': 'PIR34937', 'score': 0.18}]
chr4	GH04I070837	70836282	70836341	0.73	[{'connected_gene': 'GRSF1', 'score': 550.44}, {'connected_gene': 'UTP3', 'score': 10.11}, {'connected_gene': 'JCHAIN', 'score': 10.1}, {'connected_gene': 'GC04P070840', 'score': 0.77}, {'connected_gene': 'PIR34937', 'score': 0.19}]
chr4	GH04I070969	70969833	70972006	0.8	[{'connected_gene': 'DCK', 'score': 19.44}, {'connected_gene': 'RUFY3', 'score': 12.17}, {'connected_gene': 'GRSF1', 'score': 11.48}, {'connected_gene': 'JCHAIN', 'score': 10.93}, {'connected_gene': 'UTP3', 'score': 10.93}, {'connected_gene': 'MOB1B', 'score': 0.2}]
chr4	GH04I070742	70742401	70742600	0.4	[{'connected_gene': 'RNU6-784P', 'score': 11.98}, {'connected_gene': 'RUFY3', 'score': 11.98}, {'connected_gene': 'RNU6-520P', 'score': 11.96}, {'connected_gene': 'UTP3', 'score': 10.45}, {'connected_gene': 'JCHAIN', 'score': 10.43}, {'connected_gene': 'PIR34937', 'score': 0.34}, {'connected_gene': 'ENSG00000272986', 'score': 0.28}]