PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr19	40194964	40194986	CAGE_peak_3_at_LGALS14_5end
chr19	40194992	40195006	CAGE_peak_4_at_LGALS14_5end
chr19	40195084	40195100	CAGE_peak_2_at_LGALS14_5end
chr19	40195101	40195131	CAGE_peak_1_at_LGALS14_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr19	GH19I039703	39703812	39707273	1.49	[{'connected_gene': 'LGALS14', 'score': 550.77}, {'connected_gene': 'ZNF780B', 'score': 25.19}, {'connected_gene': 'HNRNPL', 'score': 12.96}, {'connected_gene': 'LGALS17A', 'score': 12.63}, {'connected_gene': 'NUMBL', 'score': 11.92}, {'connected_gene': 'CLC', 'score': 11.66}, {'connected_gene': 'AKT2', 'score': 11.07}, {'connected_gene': 'PAK4', 'score': 10.86}, {'connected_gene': 'EID2B', 'score': 10.29}, {'connected_gene': 'ENSG00000278813', 'score': 0.34}]
chr19	GH19I039708	39708039	39709750	0.74	[{'connected_gene': 'LGALS17A', 'score': 4.85}, {'connected_gene': 'LGALS14', 'score': 0.77}, {'connected_gene': 'ENSG00000278813', 'score': 0.37}]
chr19	GH19I039700	39700230	39703012	0.69	[{'connected_gene': 'CLC', 'score': 11.64}, {'connected_gene': 'EID2B', 'score': 10.3}, {'connected_gene': 'LGALS17A', 'score': 4.88}, {'connected_gene': 'ZNF780B', 'score': 4.68}, {'connected_gene': 'LGALS14', 'score': 0.77}, {'connected_gene': 'RPS29P27', 'score': 0.77}]
chr19	GH19I039699	39699157	39700042	0.2	[{'connected_gene': 'RPS29P27', 'score': 550.77}, {'connected_gene': 'CLC', 'score': 11.64}, {'connected_gene': 'EID2B', 'score': 10.3}, {'connected_gene': 'LGALS14', 'score': 0.77}]