PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000276943	[[27524311, 27524959], [27526004, 27526496]]	[[27524334, 27524958]]
NM_020124	[[27524311, 27524959], [27526004, 27526496]]	[[27524334, 27524958]]

Promoter

Chrom	Start	End	Description
chr9	27524283	27524289	CAGE_peak_3_at_IFNK_5end
chr9	27524417	27524425	CAGE_peak_4_at_IFNK_5end
chr9	27524485	27524505	CAGE_peak_2_at_IFNK_5end
chr9	27524537	27524559	CAGE_peak_1_at_IFNK_5end
chr9	27524670	27524673	CAGE_peak_5_at_IFNK_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I027336	27336679	27342555	1.13	[{'connected_gene': 'IFT74', 'score': 13.6}, {'connected_gene': 'MOB3B', 'score': 12.37}, {'connected_gene': 'IFNK', 'score': 10.78}, {'connected_gene': 'EQTN', 'score': 10.61}, {'connected_gene': 'ENSG00000237734', 'score': 9.99}, {'connected_gene': 'C9orf72', 'score': 5.38}, {'connected_gene': 'GC09M027375', 'score': 0.28}]
chr9	GH09I027351	27351130	27352775	1.32	[{'connected_gene': 'IFT74', 'score': 23.72}, {'connected_gene': 'MOB3B', 'score': 11.44}, {'connected_gene': 'IFNK', 'score': 10.66}, {'connected_gene': 'C9orf72', 'score': 10.5}, {'connected_gene': 'PLAA', 'score': 1.23}, {'connected_gene': 'GC09M027375', 'score': 0.31}, {'connected_gene': 'EQTN', 'score': 0.23}]
chr9	GH09I027365	27365018	27373527	1.48	[{'connected_gene': 'MOB3B', 'score': 19.35}, {'connected_gene': 'IFT74', 'score': 15.44}, {'connected_gene': 'ENSG00000237734', 'score': 11.35}, {'connected_gene': 'EQTN', 'score': 10.29}, {'connected_gene': 'IFNK', 'score': 9.85}, {'connected_gene': 'C9orf72', 'score': 7.34}, {'connected_gene': 'PLAA', 'score': 1.22}, {'connected_gene': 'GC09M027375', 'score': 0.44}]
chr9	GH09I027332	27332783	27334059	1.33	[{'connected_gene': 'MOB3B', 'score': 13.98}, {'connected_gene': 'IFNK', 'score': 10.94}, {'connected_gene': 'EQTN', 'score': 10.51}, {'connected_gene': 'IFT74', 'score': 5.59}, {'connected_gene': 'C9orf72', 'score': 2.91}, {'connected_gene': 'GC09M027375', 'score': 0.25}]
chr9	GH09I027346	27346916	27348083	0.38	[{'connected_gene': 'MOB3B', 'score': 11.43}, {'connected_gene': 'IFNK', 'score': 10.67}, {'connected_gene': 'EQTN', 'score': 10.17}, {'connected_gene': 'GC09M027375', 'score': 0.29}]
chr9	GH09I027343	27343424	27346779	0.2	[{'connected_gene': 'MOB3B', 'score': 10.95}, {'connected_gene': 'IFNK', 'score': 10.68}, {'connected_gene': 'EQTN', 'score': 10.34}, {'connected_gene': 'GC09M027375', 'score': 0.29}]
chr9	GH09I027329	27329138	27331268	0.31	[{'connected_gene': 'MOB3B', 'score': 12.15}, {'connected_gene': 'IFNK', 'score': 10.94}, {'connected_gene': 'EQTN', 'score': 10.83}, {'connected_gene': 'GC09M027375', 'score': 0.25}]
chr9	GH09I027349	27349549	27350009	0.38	[{'connected_gene': 'MOB3B', 'score': 11.43}, {'connected_gene': 'IFNK', 'score': 10.66}, {'connected_gene': 'GC09M027375', 'score': 0.31}, {'connected_gene': 'EQTN', 'score': 0.23}]
chr9	GH09I027348	27348655	27349234	0.38	[{'connected_gene': 'MOB3B', 'score': 11.43}, {'connected_gene': 'IFNK', 'score': 10.67}, {'connected_gene': 'GC09M027375', 'score': 0.31}, {'connected_gene': 'EQTN', 'score': 0.23}]
chr9	GH09I027335	27335624	27335907	0.2	[{'connected_gene': 'MOB3B', 'score': 12.37}, {'connected_gene': 'IFNK', 'score': 10.41}, {'connected_gene': 'EQTN', 'score': 9.99}, {'connected_gene': 'GC09M027375', 'score': 0.26}]
chr9	GH09I027352	27352805	27354441	1.06	[{'connected_gene': 'MOB3B', 'score': 11.44}, {'connected_gene': 'IFNK', 'score': 10.66}, {'connected_gene': 'GC09M027375', 'score': 0.31}, {'connected_gene': 'EQTN', 'score': 0.22}]
chr9	GH09I027469	27469943	27471043	0.4	[{'connected_gene': 'MOB3B', 'score': 11.0}, {'connected_gene': 'IFNK', 'score': 10.83}, {'connected_gene': 'LOC105376001', 'score': 0.31}, {'connected_gene': 'ENSG00000237734', 'score': 0.18}]
chr9	GH09I027471	27471213	27471855	0.4	[{'connected_gene': 'MOB3B', 'score': 11.0}, {'connected_gene': 'IFNK', 'score': 10.83}, {'connected_gene': 'LOC105376001', 'score': 0.31}, {'connected_gene': 'ENSG00000237734', 'score': 0.18}]
chr9	GH09I027473	27473259	27473372	0.66	[{'connected_gene': 'MOB3B', 'score': 11.0}, {'connected_gene': 'IFNK', 'score': 10.83}, {'connected_gene': 'LOC105376001', 'score': 0.31}, {'connected_gene': 'ENSG00000237734', 'score': 0.18}]
chr9	GH09I027527	27527075	27530434	2.07	[{'connected_gene': 'MOB3B', 'score': 556.14}, {'connected_gene': 'C9orf72', 'score': 17.08}, {'connected_gene': 'EQTN', 'score': 8.81}, {'connected_gene': 'IFNK', 'score': 0.77}]
chr9	GH09I027507	27507013	27508578	0.2	[{'connected_gene': 'MOB3B', 'score': 28.66}, {'connected_gene': 'C9orf72', 'score': 16.34}, {'connected_gene': 'EQTN', 'score': 9.77}, {'connected_gene': 'LOC105376001', 'score': 0.44}, {'connected_gene': 'IFNK', 'score': 0.37}]
chr9	GH09I027549	27548623	27549505	0.63	[{'connected_gene': 'IFNK', 'score': 10.16}, {'connected_gene': 'MOB3B', 'score': 0.37}, {'connected_gene': 'C9orf72', 'score': 0.34}]
chr9	GH09I027548	27548203	27548412	0.72	[{'connected_gene': 'IFNK', 'score': 10.16}, {'connected_gene': 'MOB3B', 'score': 0.37}, {'connected_gene': 'C9orf72', 'score': 0.31}]
chr9	GH09I027514	27514643	27514792	0.2	[{'connected_gene': 'IFNK', 'score': 0.44}, {'connected_gene': 'MOB3B', 'score': 0.37}, {'connected_gene': 'LOC105376001', 'score': 0.37}]
chr9	GH09I027525	27524241	27524300	0.7	[{'connected_gene': 'IFNK', 'score': 550.77}, {'connected_gene': 'MOB3B', 'score': 0.44}, {'connected_gene': 'LOC105376001', 'score': 0.31}]
chr9	GH09I027524	27524535	27524594	0.7	[{'connected_gene': 'IFNK', 'score': 550.77}, {'connected_gene': 'MOB3B', 'score': 550.44}]
chr9	GH09I027444	27444992	27449526	0.46	[{'connected_gene': 'IFNK', 'score': 9.76}, {'connected_gene': 'EQTN', 'score': 9.44}, {'connected_gene': 'LOC105376001', 'score': 0.23}, {'connected_gene': 'ENSG00000237734', 'score': 0.22}, {'connected_gene': 'MOB3B', 'score': 0.18}]
chr9	GH09I027406	27406809	27409164	0.94	[{'connected_gene': 'IFNK', 'score': 10.76}, {'connected_gene': 'EQTN', 'score': 10.19}, {'connected_gene': 'ENSG00000237734', 'score': 0.37}, {'connected_gene': 'LOC105376001', 'score': 0.16}, {'connected_gene': 'MOB3B', 'score': 0.13}]
chr9	GH09I027491	27491303	27491392	0.52	[{'connected_gene': 'IFNK', 'score': 10.64}, {'connected_gene': 'C9orf72', 'score': 5.53}, {'connected_gene': 'LOC105376001', 'score': 0.44}, {'connected_gene': 'MOB3B', 'score': 0.28}, {'connected_gene': 'ENSG00000237734', 'score': 0.15}]
chr9	GH09I027495	27495472	27496989	0.57	[{'connected_gene': 'IFNK', 'score': 10.66}, {'connected_gene': 'C9orf72', 'score': 9.38}, {'connected_gene': 'LOC105376001', 'score': 0.77}, {'connected_gene': 'MOB3B', 'score': 0.29}, {'connected_gene': 'ENSG00000237734', 'score': 0.15}]
chr9	GH09I027458	27458780	27466034	1.5	[{'connected_gene': 'C9orf72', 'score': 17.82}, {'connected_gene': 'MOB3B', 'score': 11.21}, {'connected_gene': 'ENSG00000237734', 'score': 10.19}, {'connected_gene': 'IFNK', 'score': 10.14}, {'connected_gene': 'EQTN', 'score': 9.46}, {'connected_gene': 'LOC105376001', 'score': 0.28}]
chr9	GH09I027550	27550545	27552309	0.2	[{'connected_gene': 'C9orf72', 'score': 16.4}, {'connected_gene': 'MOB3B', 'score': 12.3}, {'connected_gene': 'IFNK', 'score': 10.84}, {'connected_gene': 'EQTN', 'score': 10.05}]
chr9	GH09I027501	27501882	27504749	0.2	[{'connected_gene': 'C9orf72', 'score': 14.72}, {'connected_gene': 'MOB3B', 'score': 11.53}, {'connected_gene': 'IFNK', 'score': 11.14}, {'connected_gene': 'LOC105376001', 'score': 0.77}]
chr9	GH09I027505	27505236	27506701	0.2	[{'connected_gene': 'C9orf72', 'score': 15.23}, {'connected_gene': 'MOB3B', 'score': 11.56}, {'connected_gene': 'EQTN', 'score': 10.43}, {'connected_gene': 'ENSG00000237734', 'score': 10.41}, {'connected_gene': 'LOC105376001', 'score': 0.44}, {'connected_gene': 'IFNK', 'score': 0.37}]
chr9	GH09I027518	27518293	27521173	0.69	[{'connected_gene': 'C9orf72', 'score': 15.37}, {'connected_gene': 'IFNK', 'score': 0.77}, {'connected_gene': 'MOB3B', 'score': 0.39}, {'connected_gene': 'LOC105376001', 'score': 0.34}]
chr9	GH09I027515	27515556	27517293	0.2	[{'connected_gene': 'C9orf72', 'score': 11.43}, {'connected_gene': 'IFNK', 'score': 0.44}, {'connected_gene': 'MOB3B', 'score': 0.39}, {'connected_gene': 'LOC105376001', 'score': 0.37}]
chr9	GH09I027581	27581905	27583023	0.58	[{'connected_gene': 'C9orf72', 'score': 10.32}, {'connected_gene': 'IFNK', 'score': 5.23}, {'connected_gene': 'CTAGE12P', 'score': 0.31}]
chr9	GH09I027487	27487330	27490366	1.04	[{'connected_gene': 'C9orf72', 'score': 16.32}, {'connected_gene': 'IFNK', 'score': 10.63}, {'connected_gene': 'LOC105376001', 'score': 0.44}, {'connected_gene': 'MOB3B', 'score': 0.26}, {'connected_gene': 'ENSG00000237734', 'score': 0.15}]
chr9	GH09I027466	27466684	27466923	0.44	[{'connected_gene': 'C9orf72', 'score': 12.62}, {'connected_gene': 'IFNK', 'score': 10.38}, {'connected_gene': 'LOC105376001', 'score': 0.29}, {'connected_gene': 'MOB3B', 'score': 0.21}, {'connected_gene': 'ENSG00000237734', 'score': 0.18}]
chr9	GH09I027497	27497744	27500471	1.05	[{'connected_gene': 'LOC105376001', 'score': 550.77}, {'connected_gene': 'C9orf72', 'score': 14.81}, {'connected_gene': 'MOB3B', 'score': 11.51}, {'connected_gene': 'IFNK', 'score': 11.1}]
chr9	GH09I027354	27354932	27355480	0.2	[{'connected_gene': 'ENSG00000237734', 'score': 10.77}, {'connected_gene': 'IFNK', 'score': 9.99}, {'connected_gene': 'EQTN', 'score': 9.93}, {'connected_gene': 'GC09M027375', 'score': 0.34}, {'connected_gene': 'MOB3B', 'score': 0.09}]
chr9	GH09I027412	27412699	27415359	0.97	[{'connected_gene': 'ENSG00000237734', 'score': 11.73}, {'connected_gene': 'IFNK', 'score': 10.76}, {'connected_gene': 'EQTN', 'score': 10.18}, {'connected_gene': 'LOC105376001', 'score': 0.18}, {'connected_gene': 'MOB3B', 'score': 0.13}]
chr9	GH09I027423	27423861	27431032	1.12	[{'connected_gene': 'ENSG00000237734', 'score': 11.29}, {'connected_gene': 'IFNK', 'score': 10.4}, {'connected_gene': 'EQTN', 'score': 9.77}, {'connected_gene': 'LOC105376001', 'score': 0.19}, {'connected_gene': 'MOB3B', 'score': 0.15}]
chr9	GH09I027431	27431225	27432612	0.78	[{'connected_gene': 'ENSG00000237734', 'score': 10.56}, {'connected_gene': 'IFNK', 'score': 10.2}, {'connected_gene': 'LOC105376001', 'score': 0.2}, {'connected_gene': 'MOB3B', 'score': 0.15}]