Visualization of regulatory element with DNMs in transcripts



Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.

Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000436291 [[43370615, 43371302], [43372252, 43372507], [43372907, 43373186], [43375918, 43376197], [43382064, 43382430], [43383669, 43383850]] [[43371285, 43371302], [43372252, 43372507], [43372907, 43373186], [43375918, 43376197], [43382064, 43382430], [43383669, 43383733]]
ENST00000602039 [[43370617, 43371302], [43372252, 43372507], [43372907, 43374797]] None
ENST00000595124 [[43370617, 43371216], [43372252, 43372507], [43372907, 43373186], [43382064, 43382430], [43383669, 43383862]] [[43371205, 43371216], [43372252, 43372507], [43372907, 43373186], [43382064, 43382430], [43383669, 43383733]]
ENST00000595356 [[43370622, 43371216], [43372252, 43372507], [43372907, 43373186], [43375918, 43376197], [43382064, 43382430], [43383669, 43383799]] [[43371205, 43371216], [43372252, 43372507], [43372907, 43373186], [43375918, 43376197], [43382064, 43382430], [43383669, 43383733]]
ENST00000403380 [[43370634, 43371302], [43372252, 43372507], [43372907, 43373186], [43382064, 43382430], [43383669, 43383823]] [[43371285, 43371302], [43372252, 43372507], [43372907, 43373186], [43382064, 43382430], [43383669, 43383733]]
ENST00000312439 [[43371344, 43371897], [43372252, 43372507], [43372907, 43373186], [43375918, 43376197], [43382064, 43382430], [43383669, 43383819]] [[43371853, 43371897], [43372252, 43372507], [43372907, 43373186], [43375918, 43376197], [43382064, 43382430], [43383669, 43383733]]
ENST00000244296 [[43371357, 43372507], [43372907, 43373186], [43375918, 43376197], [43382064, 43382430], [43383669, 43383871]] [[43372214, 43372507], [43372907, 43373186], [43375918, 43376197], [43382064, 43382430], [43383669, 43383733]]
ENST00000597058 [[43372252, 43372507], [43375918, 43376197], [43382064, 43382255]] [[43372252, 43372507], [43375918, 43376197], [43382064, 43382255]]
ENST00000595930 [[43375952, 43376197], [43382064, 43382576]] [[43375952, 43376197], [43382064, 43382281]]
ENST00000601456 [[43378253, 43378295], [43382064, 43382430], [43383669, 43383832]] None
ENST00000601073 [[43380890, 43380973], [43382064, 43382430], [43383669, 43383974]] None
NM_001184825 [[43370612, 43371302], [43372252, 43372507], [43372907, 43373186], [43375918, 43376197], [43382064, 43382430], [43383669, 43383871]] [[43371285, 43371302], [43372252, 43372507], [43372907, 43373186], [43375918, 43376197], [43382064, 43382430], [43383669, 43383733]]
NM_001184826 [[43370612, 43371216], [43372252, 43372507], [43372907, 43373186], [43375918, 43376197], [43382064, 43382430], [43383669, 43383871]] [[43371205, 43371216], [43372252, 43372507], [43372907, 43373186], [43375918, 43376197], [43382064, 43382430], [43383669, 43383733]]
NM_001330524 [[43370612, 43371302], [43372252, 43372507], [43372907, 43373186], [43382064, 43382430], [43383669, 43383974]] [[43371285, 43371302], [43372252, 43372507], [43372907, 43373186], [43382064, 43382430], [43383669, 43383733]]
NM_001297773 [[43371344, 43371897], [43372252, 43372507], [43372907, 43373186], [43375918, 43376197], [43382064, 43382430], [43383669, 43383819]] [[43371853, 43371897], [43372252, 43372507], [43372907, 43373186], [43375918, 43376197], [43382064, 43382430], [43383669, 43383733]]
NM_006905 [[43371357, 43372507], [43372907, 43373186], [43375918, 43376197], [43382064, 43382430], [43383669, 43383871]] [[43372214, 43372507], [43372907, 43373186], [43375918, 43376197], [43382064, 43382430], [43383669, 43383733]]
Promoter
Chrom Start End Description
chr19 43383753 43383765 CAGE_peak_4_at_PSG1_5end
chr19 43383789 43383804 CAGE_peak_3_at_PSG1_5end
chr19 43383824 43383841 CAGE_peak_2_at_PSG1_5end
chr19 43383856 43383876 CAGE_peak_1_at_PSG1_5end