PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000332303	[[29560352, 29562033]]	[[29560994, 29561909]]
NM_138704	[[29560352, 29562020]]	[[29560994, 29561909]]

Promoter

Chrom	Start	End	Description
chr15	29561932	29561943	CAGE_peak_3_at_NDNL2_5end
chr15	29561954	29561976	CAGE_peak_2_at_NDNL2_5end
chr15	29561979	29562038	CAGE_peak_1_at_NDNL2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr15	GH15I029799	29799691	29802548	0.38	[{'connected_gene': 'NSMCE3', 'score': 5.14}, {'connected_gene': 'ENSG00000259523', 'score': 0.34}, {'connected_gene': 'GC15P029731', 'score': 0.19}, {'connected_gene': 'TJP1', 'score': 0.1}]
chr15	GH15I029139	29139473	29140868	0.86	[{'connected_gene': 'NSMCE3', 'score': 11.05}, {'connected_gene': 'HERC2P9', 'score': 5.51}, {'connected_gene': 'GOLGA8M', 'score': 4.67}, {'connected_gene': 'GC15P029119', 'score': 0.34}, {'connected_gene': 'GC15P029234', 'score': 0.16}, {'connected_gene': 'FAM189A1', 'score': 0.04}]
chr15	GH15I029071	29071730	29071844	0.59	[{'connected_gene': 'NSMCE3', 'score': 1.48}, {'connected_gene': 'PIR50840', 'score': 0.77}, {'connected_gene': 'GC15P029119', 'score': 0.25}, {'connected_gene': 'APBA2', 'score': 0.09}]
chr15	GH15I029277	29277577	29279350	0.43	[{'connected_gene': 'NSMCE3', 'score': 0.44}, {'connected_gene': 'ENSG00000259690', 'score': 0.15}, {'connected_gene': 'FAM189A1', 'score': 0.06}]
chr15	GH15I029312	29312308	29313112	0.6	[{'connected_gene': 'NSMCE3', 'score': 11.41}, {'connected_gene': 'ENSG00000259690', 'score': 0.21}, {'connected_gene': 'FAM189A1', 'score': 0.07}]
chr15	GH15I029268	29268000	29271704	1.97	[{'connected_gene': 'NSMCE3', 'score': 556.17}, {'connected_gene': 'ENSG00000259690', 'score': 0.14}, {'connected_gene': 'FAM189A1', 'score': 0.06}]
chr15	GH15I029309	29309237	29309386	0.67	[{'connected_gene': 'NSMCE3', 'score': 11.42}, {'connected_gene': 'ENSG00000259690', 'score': 0.2}, {'connected_gene': 'FAM189A1', 'score': 0.07}]
chr15	GH15I029319	29319810	29320287	0.2	[{'connected_gene': 'NSMCE3', 'score': 0.23}, {'connected_gene': 'ENSG00000259690', 'score': 0.22}, {'connected_gene': 'FAM189A1', 'score': 0.07}]
chr15	GH15I029348	29348215	29349086	0.2	[{'connected_gene': 'NSMCE3', 'score': 11.25}, {'connected_gene': 'ENSG00000259690', 'score': 0.31}, {'connected_gene': 'FAM189A1', 'score': 0.07}]
chr15	GH15I028987	28986240	28986439	0.72	[{'connected_gene': 'APBA2', 'score': 10.08}, {'connected_gene': 'NSMCE3', 'score': 6.32}, {'connected_gene': 'ENSG00000259277', 'score': 0.44}, {'connected_gene': 'PIR55356', 'score': 0.44}]
chr15	GH15I028984	28984556	28986004	1.09	[{'connected_gene': 'APBA2', 'score': 9.31}, {'connected_gene': 'HERC2P9', 'score': 6.08}, {'connected_gene': 'NSMCE3', 'score': 1.41}, {'connected_gene': 'ENSG00000259277', 'score': 0.44}, {'connected_gene': 'PIR55356', 'score': 0.44}]
chr15	GH15I029345	29345261	29346493	0.63	[{'connected_gene': 'ENSG00000259690', 'score': 0.29}, {'connected_gene': 'NSMCE3', 'score': 0.18}, {'connected_gene': 'FAM189A1', 'score': 0.07}]
chr15	GH15I029050	29050490	29051644	1	[{'connected_gene': 'PIR60804', 'score': 550.77}, {'connected_gene': 'APBA2', 'score': 5.58}, {'connected_gene': 'NSMCE3', 'score': 5.0}, {'connected_gene': 'PIR55356', 'score': 0.22}]