PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000545307	[[58666797, 58667012], [58669572, 58669645], [58674653, 58674736], [58675716, 58675825], [58678009, 58678128], [58680358, 58680416], [58681922, 58682002], [58686411, 58686447], [58690339, 58690419], [58690500, 58690574], [58697116, 58697198], [58698783, 58698985], [58701087, 58701478]]	[[58666935, 58667012], [58669572, 58669645], [58674653, 58674736], [58675716, 58675825], [58678009, 58678128], [58680358, 58680416], [58681922, 58681961]]
ENST00000254286	[[58666855, 58667012], [58669572, 58669645], [58674653, 58674736], [58675716, 58675825], [58678009, 58678117], [58680348, 58680416], [58681922, 58682002], [58686411, 58686447], [58690339, 58690419], [58690500, 58690574], [58697116, 58697198], [58698783, 58698985], [58701087, 58701750]]	[[58666935, 58667012], [58669572, 58669645], [58674653, 58674736], [58675716, 58675825], [58678009, 58678117], [58680348, 58680416], [58681922, 58682002], [58686411, 58686447], [58690339, 58690419], [58690500, 58690574], [58697116, 58697198], [58698783, 58698985], [58701087, 58701269]]
ENST00000555229	[[58666859, 58667012], [58669572, 58669645], [58674653, 58674736], [58675716, 58675825], [58678009, 58678110], [58680358, 58680416], [58681922, 58682002], [58686411, 58686447], [58690339, 58690419], [58690500, 58690574], [58697116, 58697198], [58698783, 58698985], [58701087, 58701473]]	[[58666935, 58667012], [58669572, 58669645], [58674653, 58674736], [58675716, 58675825], [58678009, 58678110], [58680358, 58680416], [58681922, 58681961]]
ENST00000555337	[[58666866, 58667012], [58669572, 58669645], [58674653, 58674736], [58675716, 58675825], [58681922, 58682002], [58686411, 58686447], [58697116, 58697198], [58698783, 58698879]]	[[58666935, 58667012], [58669572, 58669645], [58674653, 58674736], [58675716, 58675825], [58681922, 58681961]]
ENST00000556748	[[58666871, 58667012], [58674653, 58674736], [58675716, 58675825], [58681922, 58682002], [58686411, 58686447], [58690339, 58690419], [58690500, 58690574]]	[[58666935, 58667012], [58674653, 58674708]]
ENST00000556312	[[58666887, 58667012], [58669572, 58669645], [58674653, 58674736], [58675716, 58675975]]	None
ENST00000556243	[[58666928, 58667012], [58669572, 58669645], [58673766, 58673901], [58674653, 58674736], [58675716, 58675825]]	[[58666935, 58667012], [58669572, 58669645], [58673766, 58673889]]
ENST00000554402	[[58666936, 58667012], [58669572, 58669645], [58674653, 58674736], [58675716, 58675825], [58678009, 58678117], [58680348, 58680416], [58681922, 58682002], [58686411, 58686447], [58690339, 58690419], [58690500, 58690574], [58697116, 58697198], [58697797, 58697871], [58698783, 58698985], [58701087, 58701486]]	[[58666936, 58667012], [58669572, 58669645], [58674653, 58674736], [58675716, 58675825], [58678009, 58678117], [58680348, 58680416], [58681922, 58682002], [58686411, 58686447], [58690339, 58690419], [58690500, 58690574], [58697116, 58697198], [58697797, 58697836]]
ENST00000556694	[[58677801, 58678117], [58680348, 58680416], [58681922, 58682002], [58686411, 58686447], [58690339, 58690419], [58690500, 58690545]]	None
ENST00000557711	[[58679751, 58680416], [58681922, 58682002], [58686411, 58686447], [58690339, 58690419], [58690500, 58690574], [58697116, 58697198], [58698783, 58698985], [58701087, 58701452]]	None
ENST00000557583	[[58686235, 58686447], [58690339, 58690574], [58697118, 58697194]]	None
ENST00000554790	[[58686387, 58686447], [58690339, 58690419], [58690500, 58690574], [58697116, 58697198], [58698783, 58698986]]	None
ENST00000556449	[[58690210, 58690574], [58697116, 58697198], [58698783, 58698826]]	None
ENST00000555965	[[58690316, 58690419], [58690500, 58690574], [58697116, 58697198], [58698783, 58698986]]	None
ENST00000553907	[[58690340, 58690419], [58697116, 58697198], [58698783, 58698985], [58701087, 58701504]]	[[58690340, 58690419], [58697116, 58697143]]
ENST00000554642	[[58690355, 58690419], [58698783, 58698985], [58701087, 58701508]]	[[58690355, 58690419], [58698783, 58698985], [58701087, 58701269]]
NM_018477	[[58666832, 58667012], [58669572, 58669645], [58674653, 58674736], [58675716, 58675825], [58678009, 58678117], [58680348, 58680416], [58681922, 58682002], [58686411, 58686447], [58690339, 58690419], [58690500, 58690574], [58697116, 58697198], [58698783, 58698985], [58701087, 58702354]]	[[58666935, 58667012], [58669572, 58669645], [58674653, 58674736], [58675716, 58675825], [58678009, 58678117], [58680348, 58680416], [58681922, 58682002], [58686411, 58686447], [58690339, 58690419], [58690500, 58690574], [58697116, 58697198], [58698783, 58698985], [58701087, 58701269]]

Promoter

Chrom	Start	End	Description
chr14	58666824	58666902	CAGE_peak_1_at_ACTR10_5end
chr14	58666903	58666926	CAGE_peak_2_at_ACTR10_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I058280	58280564	58282943	1.56	[{'connected_gene': 'ACTR10', 'score': 22.62}, {'connected_gene': 'TOMM20L', 'score': 10.84}, {'connected_gene': 'ENSG00000258682', 'score': 8.7}, {'connected_gene': 'ARID4A', 'score': 5.8}, {'connected_gene': 'HMGB1P14', 'score': 0.77}, {'connected_gene': 'PIR55001', 'score': 0.39}, {'connected_gene': 'C14orf37', 'score': 0.37}, {'connected_gene': 'PSMA3-AS1', 'score': 0.37}]
chr14	GH14I058199	58199200	58201614	1.93	[{'connected_gene': 'ACTR10', 'score': 550.77}, {'connected_gene': 'PSMA3-AS1', 'score': 6.16}, {'connected_gene': 'C14orf37', 'score': 5.93}, {'connected_gene': 'TRK-CTT1-1', 'score': 0.28}, {'connected_gene': 'GC14P058110', 'score': 0.17}]
chr14	GH14I058198	58198203	58198352	0.31	[{'connected_gene': 'ACTR10', 'score': 550.77}, {'connected_gene': 'GC14P058189', 'score': 0.44}, {'connected_gene': 'GC14P058110', 'score': 0.17}, {'connected_gene': 'C14orf37', 'score': 0.15}]
chr14	GH14I058138	58138091	58138684	0.72	[{'connected_gene': 'ACTR10', 'score': 13.97}, {'connected_gene': 'ENSG00000259969', 'score': 4.82}, {'connected_gene': 'UBA52P3', 'score': 0.77}, {'connected_gene': 'PIR47835', 'score': 0.37}, {'connected_gene': 'GC14P058110', 'score': 0.31}, {'connected_gene': 'C14orf37', 'score': 0.1}]
chr14	GH14I058296	58296200	58300650	2.53	[{'connected_gene': 'PSMA3-AS1', 'score': 570.55}, {'connected_gene': 'ARID4A', 'score': 557.25}, {'connected_gene': 'C14orf37', 'score': 550.77}, {'connected_gene': 'KIAA0586', 'score': 25.08}, {'connected_gene': 'ENSG00000258682', 'score': 24.68}, {'connected_gene': 'TIMM9', 'score': 13.82}, {'connected_gene': 'TOMM20L', 'score': 10.77}, {'connected_gene': 'ACTR10', 'score': 6.46}, {'connected_gene': 'GC14P058345', 'score': 0.25}]
chr14	GH14I057977	57977319	57977579	0.22	[{'connected_gene': 'SLC35F4', 'score': 8.25}, {'connected_gene': 'ACTR10', 'score': 1.37}, {'connected_gene': 'C14orf37', 'score': 1.35}, {'connected_gene': 'GC14M057931', 'score': 0.39}]
chr14	GH14I057760	57760270	57760649	0.22	[{'connected_gene': 'SLC35F4', 'score': 13.62}, {'connected_gene': 'NAA30', 'score': 2.76}, {'connected_gene': 'ACTR10', 'score': 1.76}, {'connected_gene': 'EXOC5', 'score': 1.61}, {'connected_gene': 'C14orf37', 'score': 1.51}, {'connected_gene': 'RN7SKP99', 'score': 0.18}, {'connected_gene': 'GC14M057656', 'score': 0.18}]
chr14	GH14I058238	58238020	58240999	1.6	[{'connected_gene': 'TRK-CTT1-1', 'score': 550.77}, {'connected_gene': 'ARID4A', 'score': 12.77}, {'connected_gene': 'DACT1', 'score': 12.75}, {'connected_gene': 'KIAA0586', 'score': 10.26}, {'connected_gene': 'ENSG00000258682', 'score': 7.5}, {'connected_gene': 'PSMA3-AS1', 'score': 7.34}, {'connected_gene': 'C14orf37', 'score': 5.44}, {'connected_gene': 'ACTR10', 'score': 0.28}, {'connected_gene': 'GC14P058110', 'score': 0.13}]