PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000465508	[[6694227, 6695760], [6696176, 6696306], [6697257, 6697400], [6697506, 6698424], [6699961, 6700117], [6704617, 6704734], [6705100, 6705117]]	None
ENST00000349363	[[6694227, 6694844], [6705930, 6706038], [6711588, 6711662], [6712888, 6713011], [6713970, 6714099], [6727768, 6727870], [6738453, 6738527], [6740967, 6741097]]	[[6694585, 6694844], [6705930, 6706038], [6711588, 6711662], [6712888, 6713011], [6713970, 6714099], [6727768, 6727870], [6738453, 6738527], [6740967, 6741055]]
ENST00000451196	[[6694227, 6694844], [6705930, 6706038], [6711588, 6711662], [6712888, 6713011], [6713970, 6714099], [6727768, 6727870], [6738453, 6738527], [6740967, 6741097]]	[[6694585, 6694844], [6705930, 6706038], [6711588, 6711662], [6712888, 6713011], [6713970, 6714099], [6727768, 6727870], [6738453, 6738527], [6740967, 6741097]]
ENST00000377577	[[6694227, 6695760], [6696176, 6696306], [6697257, 6697400], [6697506, 6697564], [6698354, 6698424], [6699961, 6700117], [6704617, 6704734], [6705100, 6705186], [6705848, 6706038], [6711588, 6711662], [6712888, 6713011], [6713970, 6714099], [6727768, 6727870], [6738453, 6738527], [6740967, 6741097], [6761788, 6761984]]	[[6695734, 6695760], [6696176, 6696306], [6697257, 6697400], [6697506, 6697564], [6698354, 6698424], [6699961, 6700117], [6704617, 6704734], [6705100, 6705186], [6705848, 6706038], [6711588, 6711662], [6712888, 6713011], [6713970, 6714099], [6727768, 6727870], [6738453, 6738527], [6740967, 6741097], [6761788, 6761860]]
ENST00000294401	[[6695172, 6695760], [6696176, 6696306], [6697257, 6697400], [6697506, 6697564], [6698354, 6698424], [6704617, 6704734], [6705100, 6705186], [6705848, 6706038], [6711588, 6711662], [6712888, 6713011], [6713970, 6714099], [6727768, 6727870], [6738453, 6738527], [6740967, 6741097], [6761788, 6761984]]	[[6695734, 6695760], [6696176, 6696306], [6697257, 6697400], [6697506, 6697564], [6698354, 6698424], [6704617, 6704734], [6705100, 6705186], [6705848, 6706038], [6711588, 6711662], [6712888, 6713011], [6713970, 6714099], [6727768, 6727870], [6738453, 6738527], [6740967, 6741097], [6761788, 6761860]]
ENST00000542246	[[6695445, 6695760], [6696176, 6696306], [6697257, 6697400], [6697506, 6697564], [6698354, 6698424], [6699961, 6700117], [6704617, 6704734], [6705100, 6705186], [6705848, 6706038], [6711588, 6711662], [6712888, 6713011], [6713970, 6714099], [6727768, 6727870], [6738453, 6738527], [6740967, 6741097], [6741292, 6741356]]	[[6695734, 6695760], [6696176, 6696306], [6697257, 6697400], [6697506, 6697564], [6698354, 6698424], [6699961, 6700117], [6704617, 6704734], [6705100, 6705186], [6705848, 6706038], [6711588, 6711662], [6712888, 6713011], [6713970, 6714099], [6727768, 6727870], [6738453, 6738527], [6740967, 6741055]]
ENST00000377573	[[6695550, 6695760], [6696176, 6696306], [6697257, 6697400], [6697506, 6697564], [6698354, 6698424], [6699961, 6700117], [6704617, 6704734], [6705100, 6705186], [6705848, 6706038], [6711588, 6711662], [6712888, 6713011], [6713970, 6714099], [6727768, 6727870], [6740967, 6741097], [6761788, 6761863]]	[[6695734, 6695760], [6696176, 6696306], [6697257, 6697400], [6697506, 6697564], [6698354, 6698424], [6699961, 6700117], [6704617, 6704734], [6705100, 6705186], [6705848, 6706038], [6711588, 6711662], [6712888, 6713011], [6713970, 6714099], [6727768, 6727870], [6740967, 6740973]]
ENST00000472414	[[6697360, 6697400], [6697506, 6697564], [6698142, 6698424], [6699961, 6700117], [6704617, 6704734], [6705100, 6705172]]	None
ENST00000426784	[[6705859, 6706038], [6711076, 6711240], [6712888, 6713011], [6713970, 6714099], [6727768, 6727870], [6738453, 6738527], [6740967, 6741097], [6761788, 6761862]]	[[6705859, 6706038], [6711076, 6711240], [6712888, 6713011], [6713970, 6714099], [6727768, 6727870], [6738453, 6738527], [6740967, 6741097], [6761788, 6761860]]
ENST00000473993	[[6705935, 6706038], [6711588, 6711662], [6712888, 6713011], [6713970, 6714099], [6727768, 6727870], [6740967, 6741097], [6761788, 6761882]]	None
ENST00000469318	[[6712973, 6713011], [6713970, 6714099], [6727768, 6727870], [6728184, 6728270]]	None
ENST00000485073	[[6713868, 6714099], [6727768, 6727870], [6738453, 6738527], [6740967, 6741097], [6761788, 6761864]]	None
ENST00000460594	[[6714167, 6714347], [6727768, 6727870], [6738453, 6738527], [6740967, 6741097], [6761788, 6761883]]	None
ENST00000465911	[[6730520, 6730970], [6738453, 6738527], [6740967, 6741097], [6761788, 6761879]]	None
NM_018198	[[6694227, 6695760], [6696176, 6696306], [6697257, 6697400], [6697506, 6697564], [6698354, 6698424], [6699961, 6700117], [6704617, 6704734], [6705100, 6705186], [6705848, 6706038], [6711588, 6711662], [6712888, 6713011], [6713970, 6714099], [6727768, 6727870], [6738453, 6738527], [6740967, 6741097], [6761788, 6761966]]	[[6695734, 6695760], [6696176, 6696306], [6697257, 6697400], [6697506, 6697564], [6698354, 6698424], [6699961, 6700117], [6704617, 6704734], [6705100, 6705186], [6705848, 6706038], [6711588, 6711662], [6712888, 6713011], [6713970, 6714099], [6727768, 6727870], [6738453, 6738527], [6740967, 6741097], [6761788, 6761860]]

Promoter

Chrom	Start	End	Description
chr1	6761840	6761851	CAGE_peak_2_at_DNAJC11_5end
chr1	6761855	6761892	CAGE_peak_1_at_DNAJC11_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I006649	6649029	6649161	0.34	[{'connected_gene': 'THAP3', 'score': 12.09}, {'connected_gene': 'DNAJC11', 'score': 11.13}, {'connected_gene': 'KLHL21', 'score': 11.01}, {'connected_gene': 'PHF13', 'score': 10.99}, {'connected_gene': 'GC01M006638', 'score': 0.44}]
chr1	GH01I006587	6587455	6588994	0.58	[{'connected_gene': 'NOL9', 'score': 12.72}, {'connected_gene': 'TAS1R1', 'score': 12.72}, {'connected_gene': 'KLHL21', 'score': 12.52}, {'connected_gene': 'PHF13', 'score': 12.52}, {'connected_gene': 'ENSG00000229519', 'score': 12.43}, {'connected_gene': 'RNU6-731P', 'score': 12.41}, {'connected_gene': 'THAP3', 'score': 11.55}, {'connected_gene': 'DNAJC11', 'score': 10.2}, {'connected_gene': 'GC01M006590', 'score': 0.77}, {'connected_gene': 'ZBTB48', 'score': 0.44}]
chr1	GH01I006700	6700363	6702470	2.1	[{'connected_gene': 'DNAJC11', 'score': 550.77}, {'connected_gene': 'THAP3', 'score': 36.43}, {'connected_gene': 'ZBTB48', 'score': 30.38}, {'connected_gene': 'NOL9', 'score': 18.15}, {'connected_gene': 'RPL22', 'score': 11.01}, {'connected_gene': 'PHF13', 'score': 10.78}, {'connected_gene': 'KLHL21', 'score': 10.19}, {'connected_gene': 'GC01M006638', 'score': 0.21}]
chr1	GH01I006693	6693681	6694711	0.31	[{'connected_gene': 'DNAJC11', 'score': 0.44}, {'connected_gene': 'GC01M006638', 'score': 0.23}]
chr1	GH01I006806	6806925	6808628	0.56	[{'connected_gene': 'CAMTA1-DT', 'score': 11.26}, {'connected_gene': 'CAMTA1', 'score': 11.26}, {'connected_gene': 'DNAJC11', 'score': 10.4}, {'connected_gene': 'ENSG00000237365', 'score': 10.09}, {'connected_gene': 'RPL37P9', 'score': 0.31}]
chr1	GH01I006686	6686021	6686728	0.4	[{'connected_gene': 'CAMTA1-DT', 'score': 10.55}, {'connected_gene': 'CAMTA1', 'score': 10.55}, {'connected_gene': 'DNAJC11', 'score': 0.37}, {'connected_gene': 'GC01M006638', 'score': 0.25}]
chr1	GH01I006723	6723526	6725433	0.97	[{'connected_gene': 'LINC01672', 'score': 550.77}, {'connected_gene': 'THAP3', 'score': 11.65}, {'connected_gene': 'DNAJC11', 'score': 11.1}, {'connected_gene': 'CAMTA1-DT', 'score': 11.09}, {'connected_gene': 'CAMTA1', 'score': 11.09}, {'connected_gene': 'GC01P006718', 'score': 0.44}]
chr1	GH01I006637	6637881	6639063	0.38	[{'connected_gene': 'GC01M006638', 'score': 550.77}, {'connected_gene': 'THAP3', 'score': 0.39}, {'connected_gene': 'DNAJC11', 'score': 0.21}]
chr1	GH01I006589	6589051	6589856	0.74	[{'connected_gene': 'GC01M006590', 'score': 550.77}, {'connected_gene': 'THAP3', 'score': 16.51}, {'connected_gene': 'PHF13', 'score': 13.06}, {'connected_gene': 'KLHL21', 'score': 13.03}, {'connected_gene': 'NOL9', 'score': 12.72}, {'connected_gene': 'TAS1R1', 'score': 12.72}, {'connected_gene': 'ENSG00000229519', 'score': 12.43}, {'connected_gene': 'RNU6-731P', 'score': 12.41}, {'connected_gene': 'DNAJC11', 'score': 10.2}, {'connected_gene': 'ZBTB48', 'score': 0.44}]
chr1	GH01I006646	6646561	6646770	0.49	[{'connected_gene': 'GC01M006638', 'score': 0.44}, {'connected_gene': 'DNAJC11', 'score': 0.22}]
chr1	GH01I006719	6719723	6719854	0.39	[{'connected_gene': 'GC01P006718', 'score': 550.77}, {'connected_gene': 'CAMTA1-DT', 'score': 12.05}, {'connected_gene': 'CAMTA1', 'score': 12.05}, {'connected_gene': 'NOL9', 'score': 2.87}, {'connected_gene': 'DNAJC11', 'score': 1.86}, {'connected_gene': 'LINC01672', 'score': 0.77}]