PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000263461	[[122610686, 122611018], [122612035, 122612147], [122618154, 122618308], [122619620, 122619794], [122622246, 122622433], [122624558, 122624724], [122625141, 122625256], [122626080, 122626276], [122626577, 122626681], [122630681, 122630858], [122633350, 122633435], [122637864, 122637971], [122640337, 122640413], [122643291, 122643400], [122645325, 122645450], [122646200, 122646348], [122648589, 122648696], [122649406, 122649521], [122650227, 122650399], [122659540, 122659649], [122660547, 122660610], [122661768, 122661834], [122662566, 122662744], [122663558, 122663654], [122664157, 122664323], [122664830, 122664928], [122665387, 122665533], [122666287, 122666367], [122668067, 122669036]]	[[122610932, 122611018], [122612035, 122612147], [122618154, 122618308], [122619620, 122619794], [122622246, 122622433], [122624558, 122624724], [122625141, 122625256], [122626080, 122626276], [122626577, 122626681], [122630681, 122630858], [122633350, 122633435], [122637864, 122637971], [122640337, 122640413], [122643291, 122643400], [122645325, 122645450], [122646200, 122646348], [122648589, 122648696], [122649406, 122649521], [122650227, 122650399], [122659540, 122659649], [122660547, 122660610], [122661768, 122661834], [122662566, 122662744], [122663558, 122663654], [122664157, 122664323], [122664830, 122664928], [122665387, 122665533], [122666287, 122666367], [122668067, 122668225]]
ENST00000605202	[[122610816, 122611039], [122612035, 122612147], [122618154, 122618308], [122619620, 122619782]]	None
ENST00000605543	[[122610873, 122611018], [122612035, 122612115], [122630746, 122630858], [122633350, 122633435], [122637864, 122637971], [122640337, 122640413], [122643291, 122643400], [122645325, 122645450], [122646200, 122646348], [122648589, 122648696], [122649406, 122649521], [122650227, 122650399], [122659540, 122659649], [122660547, 122660610], [122661768, 122661834], [122662566, 122662744], [122663558, 122663654], [122664157, 122664323], [122664830, 122664928], [122665387, 122665533], [122666287, 122666367], [122668067, 122668694]]	[[122610932, 122611018], [122612035, 122612115], [122630746, 122630858], [122633350, 122633360]]
ENST00000605069	[[122610903, 122611018], [122618215, 122618308], [122619620, 122619794], [122622246, 122622422]]	None
ENST00000605178	[[122610915, 122611039], [122612035, 122612147], [122618154, 122618308], [122622246, 122622421]]	None
ENST00000604585	[[122610998, 122611103], [122612035, 122612147], [122615593, 122615642], [122618154, 122618308], [122619620, 122619794], [122622246, 122622433], [122624558, 122624724], [122625141, 122625256], [122626080, 122626276], [122626577, 122626681], [122630681, 122630858], [122633350, 122633435], [122637864, 122637971], [122640337, 122640387]]	[[122624622, 122624724], [122625141, 122625256], [122626080, 122626276], [122626577, 122626681], [122630681, 122630858], [122633350, 122633435], [122637864, 122637971], [122640337, 122640387]]
ENST00000470052	[[122611292, 122612147], [122618154, 122618308]]	None
ENST00000497136	[[122612127, 122612147], [122618154, 122618308], [122619620, 122619794], [122622246, 122622433], [122624558, 122624724], [122625141, 122625256], [122626080, 122626276], [122630681, 122630858], [122633350, 122633435], [122637864, 122637971], [122640337, 122640413], [122643291, 122643400], [122645325, 122645450], [122646200, 122646348], [122648589, 122648696], [122649406, 122649521], [122650227, 122650399], [122659540, 122659649], [122660547, 122660610], [122661768, 122661834], [122662566, 122662744], [122663558, 122663654], [122664157, 122664323], [122664830, 122664928], [122665387, 122666367], [122668067, 122669032]]	[[122624622, 122624724], [122625141, 122625256], [122626080, 122626276], [122630681, 122630858], [122633350, 122633360]]
ENST00000462529	[[122621961, 122622433], [122624558, 122624703]]	None
ENST00000604220	[[122628174, 122628273], [122630681, 122630858], [122633350, 122633435], [122637864, 122637971], [122640337, 122640413], [122643291, 122643317]]	None
ENST00000604509	[[122638516, 122640074], [122640337, 122640413], [122643291, 122643400], [122645325, 122645450], [122646200, 122646348], [122648589, 122649521], [122659540, 122659649], [122660547, 122660610], [122661768, 122661834], [122662566, 122662744], [122663558, 122663654], [122664161, 122664323], [122664830, 122664928], [122665387, 122665533], [122666287, 122666367], [122668067, 122669022]]	None
ENST00000605376	[[122644521, 122644637], [122645325, 122645450], [122646200, 122646348], [122648589, 122648696], [122649406, 122649480]]	None
ENST00000478567	[[122645379, 122645450], [122646200, 122646348], [122648589, 122648696], [122649406, 122649521], [122659540, 122659649], [122660547, 122660610], [122661768, 122661834], [122662566, 122662737]]	None
ENST00000605320	[[122659349, 122659649], [122660547, 122660610], [122661768, 122661834], [122662566, 122662687]]	None
ENST00000605659	[[122663552, 122663662], [122664832, 122664907]]	None
ENST00000603658	[[122663576, 122663654], [122664157, 122664323], [122664830, 122665168]]	None
ENST00000604714	[[122666806, 122669035]]	None
NM_018117	[[122610686, 122611018], [122612035, 122612147], [122618154, 122618308], [122619620, 122619794], [122622246, 122622433], [122624558, 122624724], [122625141, 122625256], [122626080, 122626276], [122626577, 122626681], [122630681, 122630858], [122633350, 122633435], [122637864, 122637971], [122640337, 122640413], [122643291, 122643400], [122645325, 122645450], [122646200, 122646348], [122648589, 122648696], [122649406, 122649521], [122650227, 122650399], [122659540, 122659649], [122660547, 122660610], [122661768, 122661834], [122662566, 122662744], [122663558, 122663654], [122664157, 122664323], [122664830, 122664928], [122665387, 122665533], [122666287, 122666367], [122668067, 122669038]]	[[122610932, 122611018], [122612035, 122612147], [122618154, 122618308], [122619620, 122619794], [122622246, 122622433], [122624558, 122624724], [122625141, 122625256], [122626080, 122626276], [122626577, 122626681], [122630681, 122630858], [122633350, 122633435], [122637864, 122637971], [122640337, 122640413], [122643291, 122643400], [122645325, 122645450], [122646200, 122646348], [122648589, 122648696], [122649406, 122649521], [122650227, 122650399], [122659540, 122659649], [122660547, 122660610], [122661768, 122661834], [122662566, 122662744], [122663558, 122663654], [122664157, 122664323], [122664830, 122664928], [122665387, 122665533], [122666287, 122666367], [122668067, 122668225]]

Promoter

Chrom	Start	End	Description
chr10	122610796	122610809	CAGE_peak_3_at_WDR11_5end
chr10	122610811	122610822	CAGE_peak_4_at_WDR11_5end
chr10	122610853	122610924	CAGE_peak_1_at_WDR11_5end
chr10	122611224	122611295	CAGE_peak_2_at_WDR11_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I119871	119871000	119874233	2.01	[{'connected_gene': 'MCMBP', 'score': 563.16}, {'connected_gene': 'SEC23IP', 'score': 18.88}, {'connected_gene': 'TIAL1', 'score': 16.31}, {'connected_gene': 'WDR11', 'score': 9.76}, {'connected_gene': 'INPP5F', 'score': 8.57}, {'connected_gene': 'ENSG00000282413', 'score': 0.23}]
chr10	GH10I121332	121332379	121334136	0.63	[{'connected_gene': 'WDR11', 'score': 34.68}, {'connected_gene': 'NSMCE4A', 'score': 11.67}, {'connected_gene': 'RPL21P16', 'score': 11.0}, {'connected_gene': 'ATE1-AS1', 'score': 10.65}, {'connected_gene': 'LOC105378523', 'score': 0.39}, {'connected_gene': 'GC10M121343', 'score': 0.34}]
chr10	GH10I121521	121521880	121522479	0.43	[{'connected_gene': 'WDR11', 'score': 17.03}, {'connected_gene': 'NSMCE4A', 'score': 11.69}, {'connected_gene': 'FGFR2', 'score': 10.57}, {'connected_gene': 'RN7SKP167', 'score': 0.14}]
chr10	GH10I121307	121307208	121310316	0.97	[{'connected_gene': 'WDR11', 'score': 46.47}, {'connected_gene': 'NSMCE4A', 'score': 11.77}, {'connected_gene': 'ATE1', 'score': 9.92}, {'connected_gene': 'LOC105378523', 'score': 0.39}, {'connected_gene': 'GC10M121233', 'score': 0.22}]
chr10	GH10I121497	121497119	121505197	0.91	[{'connected_gene': 'WDR11', 'score': 69.48}, {'connected_gene': 'NSMCE4A', 'score': 25.28}, {'connected_gene': 'RN7SKP167', 'score': 0.16}, {'connected_gene': 'FGFR2', 'score': 0.15}]
chr10	GH10I120850	120850540	120852993	2.11	[{'connected_gene': 'WDR11', 'score': 628.14}, {'connected_gene': 'WDR11-AS1', 'score': 550.77}, {'connected_gene': 'SEC23IP', 'score': 28.64}, {'connected_gene': 'MCMBP', 'score': 9.77}, {'connected_gene': 'ENSG00000271670', 'score': 0.31}]
chr10	GH10I121417	121417777	121419274	0.7	[{'connected_gene': 'WDR11', 'score': 18.01}, {'connected_gene': 'RN7SKP167', 'score': 0.44}, {'connected_gene': 'FGFR2', 'score': 0.09}]
chr10	GH10I121112	121112307	121113997	0.63	[{'connected_gene': 'WDR11', 'score': 9.8}, {'connected_gene': 'LOC105378522', 'score': 0.37}, {'connected_gene': 'LOC105378521', 'score': 0.28}]
chr10	GH10I120961	120961981	120962501	0.31	[{'connected_gene': 'WDR11', 'score': 11.24}, {'connected_gene': 'LOC105378518', 'score': 0.44}, {'connected_gene': 'LOC105378519', 'score': 0.37}]
chr10	GH10I120948	120948838	120950472	1.01	[{'connected_gene': 'WDR11', 'score': 41.09}, {'connected_gene': 'ENSG00000224250', 'score': 10.84}, {'connected_gene': 'LOC105378518', 'score': 0.77}, {'connected_gene': 'GC10P120938', 'score': 0.39}, {'connected_gene': 'LOC105378519', 'score': 0.29}]
chr10	GH10I120962	120962770	120964506	0.43	[{'connected_gene': 'WDR11', 'score': 26.73}, {'connected_gene': 'LOC105378518', 'score': 0.44}, {'connected_gene': 'LOC105378519', 'score': 0.37}]
chr10	GH10I120789	120789980	120790093	0.33	[{'connected_gene': 'WDR11', 'score': 2.2}, {'connected_gene': 'LOC105378516', 'score': 0.34}, {'connected_gene': 'WDR11-AS1', 'score': 0.21}, {'connected_gene': 'LINC01561', 'score': 0.08}]
chr10	GH10I120799	120799552	120801902	0.2	[{'connected_gene': 'WDR11', 'score': 11.49}, {'connected_gene': 'LOC105378516', 'score': 0.39}, {'connected_gene': 'WDR11-AS1', 'score': 0.23}, {'connected_gene': 'LINC01561', 'score': 0.08}]
chr10	GH10I121095	121095834	121098521	0.76	[{'connected_gene': 'NSMCE4A', 'score': 5.04}, {'connected_gene': 'WDR11', 'score': 4.78}, {'connected_gene': 'LOC105378521', 'score': 0.37}, {'connected_gene': 'LOC105378522', 'score': 0.29}]
chr10	GH10I120835	120835009	120835122	0.22	[{'connected_gene': 'WDR11-AS1', 'score': 0.37}, {'connected_gene': 'WDR11', 'score': 0.37}, {'connected_gene': 'LOC105378516', 'score': 0.34}]
chr10	GH10I121554	121553763	121554303	0.96	[{'connected_gene': 'FGFR2', 'score': 10.86}, {'connected_gene': 'WDR11', 'score': 9.76}, {'connected_gene': 'RN7SKP167', 'score': 0.11}]
chr10	GH10I121323	121322379	121327174	0.94	[{'connected_gene': 'LOC105378523', 'score': 550.77}, {'connected_gene': 'WDR11', 'score': 17.62}, {'connected_gene': 'NSMCE4A', 'score': 10.36}, {'connected_gene': 'GC10M121343', 'score': 0.29}]
chr10	GH10I120977	120977656	120980870	1.14	[{'connected_gene': 'LOC105378519', 'score': 550.77}, {'connected_gene': 'WDR11', 'score': 6.0}, {'connected_gene': 'WDR11-AS1', 'score': 4.62}, {'connected_gene': 'LOC105378518', 'score': 0.31}]
chr10	GH10I120812	120812941	120813838	0.2	[{'connected_gene': 'LOC105378516', 'score': 550.77}, {'connected_gene': 'WDR11', 'score': 11.52}, {'connected_gene': 'WDR11-AS1', 'score': 5.13}, {'connected_gene': 'LINC01561', 'score': 0.08}]
chr10	GH10I120942	120942701	120943400	0.96	[{'connected_gene': 'ENSG00000224250', 'score': 11.43}, {'connected_gene': 'WDR11-AS1', 'score': 5.87}, {'connected_gene': 'WDR11', 'score': 5.04}, {'connected_gene': 'GC10P120938', 'score': 0.77}, {'connected_gene': 'LOC105378518', 'score': 0.39}, {'connected_gene': 'LOC105378519', 'score': 0.28}]