PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000539805	[[13246708, 13246829], [13296616, 13296702], [13371041, 13371099], [13398094, 13398168], [13415690, 13415801], [13463873, 13463984], [13604092, 13604161], [13605831, 13605899], [13610580, 13610799], [13619540, 13619575]]	[[13415756, 13415801], [13463873, 13463984], [13604092, 13604161], [13605831, 13605899], [13610580, 13610725]]
ENST00000480436	[[13370038, 13371099], [13398094, 13398168], [13415690, 13415801], [13463873, 13463984], [13509092, 13509158], [13514668, 13514788], [13539654, 13539761], [13550153, 13550233], [13561543, 13561628], [13567896, 13568017], [13604092, 13604161], [13605831, 13605899], [13610580, 13610799], [13619540, 13619550]]	None
ENST00000337743	[[13370038, 13371099], [13398094, 13398168], [13415690, 13415801], [13463873, 13463984], [13509079, 13509158], [13514668, 13514788], [13539654, 13539761], [13550153, 13550233], [13561543, 13561628], [13567896, 13568017], [13604092, 13604161], [13605831, 13605899], [13610580, 13610799], [13619540, 13619587]]	[[13371006, 13371099], [13398094, 13398168], [13415690, 13415801], [13463873, 13463984], [13509079, 13509158], [13514668, 13514788], [13539654, 13539761], [13550153, 13550233], [13561543, 13561628], [13567896, 13568017], [13604092, 13604161], [13605831, 13605899], [13610580, 13610725]]
ENST00000465381	[[13415690, 13415801], [13463873, 13463984], [13509079, 13509158], [13514668, 13514788], [13561543, 13561628], [13567896, 13568017], [13604092, 13604161], [13605831, 13605899], [13610580, 13610799], [13619540, 13619550]]	None
ENST00000455532	[[13463873, 13463984], [13509079, 13509158], [13514668, 13514788], [13539654, 13539761], [13550153, 13550233], [13561543, 13561628], [13567896, 13568017], [13605831, 13605899], [13610580, 13610799], [13619540, 13619550]]	[[13463873, 13463984], [13509079, 13509158], [13514668, 13514788], [13539654, 13539761], [13550153, 13550233], [13561543, 13561628], [13567896, 13568017], [13605831, 13605899], [13610580, 13610725]]
ENST00000476108	[[13567896, 13568017], [13581189, 13581264], [13597503, 13597770], [13604092, 13604161], [13605831, 13605899], [13610580, 13610799], [13619540, 13619550]]	None
ENST00000483898	[[13567896, 13568017], [13597503, 13597770], [13604092, 13604161], [13605831, 13605899], [13610580, 13610799], [13619540, 13619550]]	None
ENST00000434275	[[13595313, 13595524], [13604092, 13604161], [13605831, 13605899], [13610580, 13610658]]	[[13595407, 13595524], [13604092, 13604161], [13605831, 13605899], [13610580, 13610658]]
ENST00000544472	[[13597250, 13597770], [13604092, 13604161], [13605831, 13605899], [13610580, 13610799], [13619540, 13619564]]	[[13597662, 13597770], [13604092, 13604161], [13605831, 13605899], [13610580, 13610725]]
NM_001323603	[[13370035, 13371099], [13398094, 13398168], [13415690, 13415801], [13463873, 13463984], [13509079, 13509158], [13514668, 13514788], [13539654, 13539761], [13550153, 13550233], [13561543, 13561628], [13567896, 13568017], [13597503, 13597770], [13604092, 13604161], [13605831, 13605899], [13610580, 13610799], [13619540, 13619583]]	[[13371006, 13371099], [13398094, 13398168], [13415690, 13415801], [13463873, 13463984], [13509079, 13509158], [13514668, 13514788], [13539654, 13539761], [13550153, 13550233], [13561543, 13561628], [13567896, 13567993]]
NR_136631	[[13370035, 13371099], [13398094, 13398168], [13415690, 13415801], [13463873, 13463984], [13509092, 13509158], [13514668, 13514788], [13550153, 13550233], [13561543, 13561628], [13567896, 13568017], [13597503, 13597770], [13604092, 13604161], [13605831, 13605899], [13610580, 13610799], [13619540, 13619583]]	None
NR_136630	[[13370035, 13371099], [13398094, 13398168], [13415690, 13415801], [13463873, 13463984], [13509092, 13509158], [13514668, 13514788], [13561543, 13561628], [13567896, 13568017], [13597503, 13597770], [13604092, 13604161], [13605831, 13605899], [13610580, 13610799], [13619540, 13619583]]	None
NM_001323604	[[13370035, 13371099], [13398094, 13398168], [13415690, 13415801], [13463873, 13463984], [13509079, 13509158], [13514668, 13514788], [13539654, 13539761], [13550153, 13550233], [13561543, 13561628], [13567896, 13568017], [13581189, 13581264], [13604092, 13604161], [13605831, 13605899], [13610580, 13610799], [13619540, 13619583]]	[[13371006, 13371099], [13398094, 13398168], [13415690, 13415801], [13463873, 13463984], [13509079, 13509158], [13514668, 13514788], [13539654, 13539761], [13550153, 13550233], [13561543, 13561628], [13567896, 13567993]]
NM_017714	[[13370035, 13371099], [13398094, 13398168], [13415690, 13415801], [13463873, 13463984], [13509079, 13509158], [13514668, 13514788], [13539654, 13539761], [13550153, 13550233], [13561543, 13561628], [13567896, 13568017], [13604092, 13604161], [13605831, 13605899], [13610580, 13610799], [13619540, 13619583]]	[[13371006, 13371099], [13398094, 13398168], [13415690, 13415801], [13463873, 13463984], [13509079, 13509158], [13514668, 13514788], [13539654, 13539761], [13550153, 13550233], [13561543, 13561628], [13567896, 13568017], [13604092, 13604161], [13605831, 13605899], [13610580, 13610725]]
NR_136628	[[13370035, 13371099], [13398094, 13398168], [13415690, 13415801], [13463873, 13463984], [13509092, 13509158], [13514668, 13514788], [13550153, 13550233], [13561543, 13561628], [13567896, 13568017], [13604092, 13604161], [13605831, 13605899], [13610580, 13610799], [13619540, 13619583]]	None
NR_136629	[[13370035, 13371099], [13398094, 13398168], [13415690, 13415801], [13463873, 13463984], [13509079, 13509158], [13514668, 13514788], [13561543, 13561628], [13567896, 13568017], [13604092, 13604161], [13605831, 13605899], [13610580, 13610799], [13619540, 13619583]]	None
NM_001323602	[[13370035, 13371099], [13398094, 13398168], [13415690, 13415801], [13463873, 13463984], [13509079, 13509158], [13514668, 13514788], [13604092, 13604161], [13605831, 13605899], [13610580, 13610799], [13619540, 13619583]]	[[13371006, 13371099], [13398094, 13398168], [13415690, 13415801], [13463873, 13463984], [13509079, 13509158], [13514668, 13514788], [13604092, 13604161], [13605831, 13605899], [13610580, 13610725]]

Promoter

Chrom	Start	End	Description
chr20	13619555	13619585	CAGE_peak_1_at_TASP1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr20	GH20I013735	13735894	13738218	0.2	[{'connected_gene': 'NDUFAF5', 'score': 29.76}, {'connected_gene': 'ESF1', 'score': 11.74}, {'connected_gene': 'GC20M013782', 'score': 0.25}, {'connected_gene': 'TASP1', 'score': 0.15}]
chr20	GH20I013777	13777188	13777600	0.84	[{'connected_gene': 'NDUFAF5', 'score': 9.3}, {'connected_gene': 'ESF1', 'score': 0.44}, {'connected_gene': 'GC20M013782', 'score': 0.44}, {'connected_gene': 'TASP1', 'score': 0.12}]
chr20	GH20I013546	13546601	13546800	0.98	[{'connected_gene': 'TASP1', 'score': 0.16}, {'connected_gene': 'GC20M013443', 'score': 0.15}]
chr20	GH20I013637	13637800	13639856	1.99	[{'connected_gene': 'TASP1', 'score': 571.0}, {'connected_gene': 'GC20M013443', 'score': 0.08}]
chr20	GH20I013491	13491494	13492983	0.85	[{'connected_gene': 'TASP1', 'score': 7.99}, {'connected_gene': 'GC20M013443', 'score': 0.26}]
chr20	GH20I013677	13677220	13681100	0.2	[{'connected_gene': 'TASP1', 'score': 18.13}, {'connected_gene': 'GC20M013782', 'score': 0.15}]
chr20	GH20I013670	13670636	13672406	0.69	[{'connected_gene': 'TASP1', 'score': 8.47}, {'connected_gene': 'GC20M013782', 'score': 0.14}]
chr20	GH20I013628	13627174	13628219	0.2	[{'connected_gene': 'TASP1', 'score': 20.22}, {'connected_gene': 'GC20M013443', 'score': 0.1}]
chr20	GH20I013659	13659434	13659583	0.71	[{'connected_gene': 'TASP1', 'score': 0.34}, {'connected_gene': 'GC20M013782', 'score': 0.13}]
chr20	GH20I013681	13681614	13681743	1.13	[{'connected_gene': 'TASP1', 'score': 0.26}, {'connected_gene': 'GC20M013782', 'score': 0.15}]
chr20	GH20I013626	13626406	13626715	0.2	[{'connected_gene': 'TASP1', 'score': 34.71}, {'connected_gene': 'GC20M013443', 'score': 0.1}]
chr20	GH20I013684	13684134	13685123	0.94	[{'connected_gene': 'TASP1', 'score': 0.25}, {'connected_gene': 'GC20M013782', 'score': 0.15}]
chr20	GH20I013649	13649277	13650303	0.43	[{'connected_gene': 'TASP1', 'score': 9.24}, {'connected_gene': 'GC20M013782', 'score': 0.12}]
chr20	GH20I013674	13674263	13675031	0.2	[{'connected_gene': 'TASP1', 'score': 7.72}, {'connected_gene': 'GC20M013782', 'score': 0.14}]
chr20	GH20I013697	13697490	13697872	0.44	[{'connected_gene': 'TASP1', 'score': 6.7}, {'connected_gene': 'GC20M013782', 'score': 0.17}]
chr20	GH20I013690	13690594	13691574	0.4	[{'connected_gene': 'TASP1', 'score': 0.23}, {'connected_gene': 'GC20M013782', 'score': 0.16}]
chr20	GH20I013661	13661275	13661638	0.31	[{'connected_gene': 'TASP1', 'score': 12.47}, {'connected_gene': 'GC20M013782', 'score': 0.13}]
chr20	GH20I013627	13626874	13627023	0.2	[{'connected_gene': 'TASP1', 'score': 32.49}, {'connected_gene': 'GC20M013443', 'score': 0.1}]
chr20	GH20I013725	13725105	13725376	0.41	[{'connected_gene': 'ESF1', 'score': 0.22}, {'connected_gene': 'GC20M013782', 'score': 0.22}, {'connected_gene': 'TASP1', 'score': 0.17}]
chr20	GH20I013418	13418774	13418923	0.92	[{'connected_gene': 'MRPS36P6', 'score': 0.39}, {'connected_gene': 'GC20M013443', 'score': 0.31}, {'connected_gene': 'TASP1', 'score': 0.07}]
chr20	GH20I013412	13412855	13413370	0.31	[{'connected_gene': 'MRPS36P6', 'score': 0.44}, {'connected_gene': 'GC20M013443', 'score': 0.29}, {'connected_gene': 'TASP1', 'score': 0.07}]
chr20	GH20I013398	13398369	13398498	0.22	[{'connected_gene': 'MRPS36P6', 'score': 0.44}, {'connected_gene': 'GAPDHP2', 'score': 0.44}, {'connected_gene': 'TASP1', 'score': 0.07}]
chr20	GH20I014332	14332684	14338284	2.14	[{'connected_gene': 'FLRT3', 'score': 550.77}, {'connected_gene': 'GAPDHP2', 'score': 11.93}, {'connected_gene': 'TASP1', 'score': 11.0}, {'connected_gene': 'GC20M014272', 'score': 0.25}, {'connected_gene': 'RN7SL864P', 'score': 0.14}, {'connected_gene': 'MACROD2', 'score': 0.05}]
chr20	GH20I013515	13515808	13516698	0.2	[{'connected_gene': 'GC20M013443', 'score': 0.2}, {'connected_gene': 'TASP1', 'score': 0.13}]
chr20	GH20I013524	13524493	13526202	0.63	[{'connected_gene': 'GC20M013443', 'score': 0.18}, {'connected_gene': 'TASP1', 'score': 0.14}]
chr20	GH20I013493	13493174	13493323	0.2	[{'connected_gene': 'GC20M013443', 'score': 0.25}, {'connected_gene': 'TASP1', 'score': 0.11}]
chr20	GH20I013753	13753727	13754078	0.34	[{'connected_gene': 'GC20M013782', 'score': 0.31}, {'connected_gene': 'ESF1', 'score': 0.29}, {'connected_gene': 'TASP1', 'score': 0.14}]
chr20	GH20I013230	13230609	13232049	0.96	[{'connected_gene': 'ENSG00000225956', 'score': 8.81}, {'connected_gene': 'ISM1-AS1', 'score': 8.29}, {'connected_gene': 'ISM1', 'score': 2.03}, {'connected_gene': 'TASP1', 'score': 1.73}, {'connected_gene': 'LOC105372539', 'score': 0.44}]