PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000297814	[[86451612, 86452400], [86457151, 86457316], [86465013, 86465212], [86468543, 86468750], [86474070, 86474286], [86482598, 86482775], [86485433, 86485547], [86495211, 86495409], [86498727, 86498933], [86501955, 86502111], [86503403, 86503507], [86503998, 86504168], [86506209, 86506416], [86514575, 86514719], [86517974, 86518933], [86523366, 86523567], [86530208, 86530593], [86536285, 86536342]]	[[86451915, 86452400], [86457151, 86457316], [86465013, 86465212], [86468543, 86468750], [86474070, 86474286], [86482598, 86482775], [86485433, 86485547], [86495211, 86495409], [86498727, 86498933], [86501955, 86502111], [86503403, 86503507], [86503998, 86504168], [86506209, 86506416], [86514575, 86514719], [86517974, 86518933], [86523366, 86523567], [86530208, 86530506]]
ENST00000413982	[[86451612, 86452400], [86457151, 86457316], [86465013, 86465212], [86468543, 86468750], [86474070, 86474286], [86482598, 86482775], [86485433, 86485547], [86498727, 86498933], [86501955, 86502111], [86503403, 86503507], [86503998, 86504168], [86506209, 86506416], [86514575, 86514719], [86517974, 86518933], [86523366, 86523567], [86530208, 86530593], [86536285, 86536342]]	[[86451915, 86452400], [86457151, 86457316], [86465013, 86465212], [86468543, 86468750], [86474070, 86474286], [86482598, 86482775], [86485433, 86485547], [86498727, 86498933], [86501955, 86502111], [86503403, 86503507], [86503998, 86504168], [86506209, 86506416], [86514575, 86514719], [86517974, 86518933], [86523366, 86523567], [86530208, 86530506]]
ENST00000334204	[[86451612, 86452400], [86457151, 86457316], [86465013, 86465212], [86468543, 86468750], [86474070, 86474286], [86495211, 86495409], [86498727, 86498933], [86501955, 86502111], [86503403, 86503507], [86503998, 86504168], [86506209, 86506416], [86514575, 86514719], [86517974, 86518933], [86523366, 86523567], [86530208, 86530593], [86536285, 86536342]]	[[86451915, 86452400], [86457151, 86457316], [86465013, 86465212], [86468543, 86468750], [86474070, 86474286], [86495211, 86495409], [86498727, 86498933], [86501955, 86502111], [86503403, 86503507], [86503998, 86504168], [86506209, 86506416], [86514575, 86514719], [86517974, 86518933], [86523366, 86523567], [86530208, 86530506]]
ENST00000376347	[[86495032, 86495409], [86498727, 86498933], [86501955, 86502111], [86503403, 86503507], [86503998, 86504185]]	[[86495166, 86495409], [86498727, 86498933], [86501955, 86502111], [86503403, 86503507], [86503998, 86504150]]
ENST00000495062	[[86513610, 86513863], [86514575, 86514719], [86523366, 86523567], [86530208, 86530593]]	[[86514702, 86514719], [86523366, 86523567], [86530208, 86530506]]
NM_017576	[[86451612, 86452400], [86457151, 86457316], [86465013, 86465212], [86468543, 86468750], [86474070, 86474286], [86482598, 86482775], [86485433, 86485547], [86495211, 86495409], [86498727, 86498933], [86501955, 86502111], [86503403, 86503507], [86503998, 86504168], [86506209, 86506416], [86514575, 86514719], [86517974, 86518933], [86523366, 86523567], [86530208, 86530593], [86536285, 86536380]]	[[86451915, 86452400], [86457151, 86457316], [86465013, 86465212], [86468543, 86468750], [86474070, 86474286], [86482598, 86482775], [86485433, 86485547], [86495211, 86495409], [86498727, 86498933], [86501955, 86502111], [86503403, 86503507], [86503998, 86504168], [86506209, 86506416], [86514575, 86514719], [86517974, 86518933], [86523366, 86523567], [86530208, 86530506]]
NM_001271928	[[86451612, 86452400], [86457151, 86457316], [86465013, 86465212], [86468543, 86468750], [86474070, 86474286], [86495211, 86495409], [86498727, 86498933], [86501955, 86502111], [86503403, 86503507], [86503998, 86504168], [86506209, 86506416], [86514575, 86514719], [86517974, 86518933], [86523366, 86523567], [86530208, 86530593], [86536285, 86536380]]	[[86451915, 86452400], [86457151, 86457316], [86465013, 86465212], [86468543, 86468750], [86474070, 86474286], [86495211, 86495409], [86498727, 86498933], [86501955, 86502111], [86503403, 86503507], [86503998, 86504168], [86506209, 86506416], [86514575, 86514719], [86517974, 86518933], [86523366, 86523567], [86530208, 86530506]]
NM_001271927	[[86451612, 86452400], [86457151, 86457316], [86465013, 86465212], [86468543, 86468750], [86474070, 86474286], [86482598, 86482775], [86485433, 86485547], [86498727, 86498933], [86501955, 86502111], [86503403, 86503507], [86503998, 86504168], [86506209, 86506416], [86514575, 86514719], [86517974, 86518933], [86523366, 86523567], [86530208, 86530593], [86536285, 86536380]]	[[86451915, 86452400], [86457151, 86457316], [86465013, 86465212], [86468543, 86468750], [86474070, 86474286], [86482598, 86482775], [86485433, 86485547], [86498727, 86498933], [86501955, 86502111], [86503403, 86503507], [86503998, 86504168], [86506209, 86506416], [86514575, 86514719], [86517974, 86518933], [86523366, 86523567], [86530208, 86530506]]

Promoter

Chrom	Start	End	Description
chr9	86536323	86536414	CAGE_peak_1_at_KIF27_5end
chr9	86536420	86536454	CAGE_peak_2_at_KIF27_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I083983	83983001	83983400	0.63	[{'connected_gene': 'C9orf64', 'score': 11.41}, {'connected_gene': 'KIF27', 'score': 10.41}, {'connected_gene': 'LOC105376116', 'score': 9.84}, {'connected_gene': 'RMI1', 'score': 6.63}, {'connected_gene': 'GC09P083995', 'score': 0.44}]
chr9	GH09I083955	83955322	83957605	1.99	[{'connected_gene': 'C9orf64', 'score': 550.77}, {'connected_gene': 'HNRNPK', 'score': 16.35}, {'connected_gene': 'LOC105376114', 'score': 7.48}, {'connected_gene': 'RMI1', 'score': 6.75}, {'connected_gene': 'KIF27', 'score': 0.29}]
chr9	GH09I083933	83933341	83936204	0.94	[{'connected_gene': 'C9orf64', 'score': 12.97}, {'connected_gene': 'LOC105376116', 'score': 10.63}, {'connected_gene': 'RMI1', 'score': 7.12}, {'connected_gene': 'ENSG00000231616', 'score': 4.85}, {'connected_gene': 'KIF27', 'score': 0.39}]
chr9	GH09I083816	83816400	83820151	1.87	[{'connected_gene': 'GKAP1', 'score': 558.34}, {'connected_gene': 'LOC101927552', 'score': 550.77}, {'connected_gene': 'KIF27', 'score': 10.62}, {'connected_gene': 'ENSG00000231616', 'score': 6.3}, {'connected_gene': 'LOC105376114', 'score': 5.78}]
chr9	GH09I083986	83986137	83989206	1.42	[{'connected_gene': 'KIF27', 'score': 10.56}, {'connected_gene': 'RMI1', 'score': 7.14}, {'connected_gene': 'GC09P083995', 'score': 0.44}]
chr9	GH09I083885	83885292	83886913	1.05	[{'connected_gene': 'KIF27', 'score': 10.92}, {'connected_gene': 'IDNK', 'score': 8.41}, {'connected_gene': 'GKAP1', 'score': 7.42}, {'connected_gene': 'LOC105376335', 'score': 0.29}, {'connected_gene': 'ENSG00000231616', 'score': 0.23}]
chr9	GH09I083508	83508146	83508295	0.64	[{'connected_gene': 'KIF27', 'score': 4.71}, {'connected_gene': 'HNRNPK', 'score': 1.74}, {'connected_gene': 'UBQLN1', 'score': 1.26}, {'connected_gene': 'PIR58953', 'score': 0.77}, {'connected_gene': 'GC09M083513', 'score': 0.77}, {'connected_gene': 'FRMD3', 'score': 0.29}, {'connected_gene': 'GC09M083455', 'score': 0.21}]
chr9	GH09I083961	83961853	83963112	0.82	[{'connected_gene': 'KIF27', 'score': 10.94}, {'connected_gene': 'LOC105376116', 'score': 10.47}, {'connected_gene': 'RMI1', 'score': 6.04}, {'connected_gene': 'MIR7-1', 'score': 0.44}, {'connected_gene': 'C9orf64', 'score': 0.44}]
chr9	GH09I083965	83965001	83966175	0.97	[{'connected_gene': 'KIF27', 'score': 10.94}, {'connected_gene': 'LOC105376116', 'score': 10.47}, {'connected_gene': 'IDNK', 'score': 8.38}, {'connected_gene': 'ENSG00000231616', 'score': 4.82}, {'connected_gene': 'MIR7-1', 'score': 0.77}, {'connected_gene': 'C9orf64', 'score': 0.44}]
chr9	GH09I084265	84265766	84266600	0.6	[{'connected_gene': 'KIF27', 'score': 10.0}, {'connected_gene': 'LOC105376116', 'score': 0.39}, {'connected_gene': 'HMGN2P33', 'score': 0.09}]
chr9	GH09I082923	82923466	82923575	0.94	[{'connected_gene': 'KIF27', 'score': 12.55}, {'connected_gene': 'GC09P082928', 'score': 0.77}, {'connected_gene': 'PIR62855', 'score': 0.28}]
chr9	GH09I083912	83912200	83912600	0.52	[{'connected_gene': 'IDNK', 'score': 10.5}, {'connected_gene': 'LOC105376335', 'score': 0.44}, {'connected_gene': 'KIF27', 'score': 0.44}, {'connected_gene': 'ENSG00000231616', 'score': 0.18}]
chr9	GH09I083620	83620773	83626063	2.66	[{'connected_gene': 'IDNK', 'score': 562.26}, {'connected_gene': 'LOC105376114', 'score': 27.05}, {'connected_gene': 'KIF27', 'score': 22.06}, {'connected_gene': 'UBQLN1', 'score': 5.9}, {'connected_gene': 'GKAP1', 'score': 1.43}, {'connected_gene': 'GC09M083666', 'score': 0.21}]
chr9	GH09I083977	83977305	83982808	2.29	[{'connected_gene': 'HNRNPK', 'score': 579.02}, {'connected_gene': 'RMI1', 'score': 557.48}, {'connected_gene': 'KIF27', 'score': 37.05}, {'connected_gene': 'C9orf64', 'score': 11.98}, {'connected_gene': 'LOC105376116', 'score': 9.84}, {'connected_gene': 'IDNK', 'score': 8.27}, {'connected_gene': 'GKAP1', 'score': 5.26}, {'connected_gene': 'ENSG00000235298', 'score': 0.44}]
chr9	GH09I083922	83922566	83922715	0.43	[{'connected_gene': 'LOC105376335', 'score': 550.77}, {'connected_gene': 'KIF27', 'score': 550.77}, {'connected_gene': 'C9orf64', 'score': 0.29}]
chr9	GH09I083920	83920178	83922276	1.99	[{'connected_gene': 'LOC105376335', 'score': 550.77}, {'connected_gene': 'KIF27', 'score': 550.77}, {'connected_gene': 'ENSG00000231616', 'score': 6.11}]
chr9	GH09I083937	83937966	83938135	0.63	[{'connected_gene': 'LOC105376116', 'score': 10.61}, {'connected_gene': 'C9orf64', 'score': 0.37}, {'connected_gene': 'KIF27', 'score': 0.37}]
chr9	GH09I083940	83940562	83941608	0.38	[{'connected_gene': 'LOC105376116', 'score': 10.61}, {'connected_gene': 'C9orf64', 'score': 0.37}, {'connected_gene': 'KIF27', 'score': 0.37}]
chr9	GH09I084315	84315201	84315602	0.8	[{'connected_gene': 'LOC105376116', 'score': 11.74}, {'connected_gene': 'KIF27', 'score': 10.27}, {'connected_gene': 'IDNK', 'score': 9.03}, {'connected_gene': 'SLC28A3', 'score': 0.23}]
chr9	GH09I084253	84253366	84256763	0.49	[{'connected_gene': 'LOC105376116', 'score': 11.81}, {'connected_gene': 'KIF27', 'score': 10.16}, {'connected_gene': 'HMGN2P33', 'score': 0.1}]
chr9	GH09I083705	83705512	83709453	2.29	[{'connected_gene': 'LOC105376114', 'score': 582.31}, {'connected_gene': 'UBQLN1', 'score': 550.77}, {'connected_gene': 'HNRNPK', 'score': 20.14}, {'connected_gene': 'KIF27', 'score': 12.64}, {'connected_gene': 'IDNK', 'score': 10.51}, {'connected_gene': 'GC09M083666', 'score': 0.34}]
chr9	GH09I083992	83992094	83992831	0.88	[{'connected_gene': 'GC09P083995', 'score': 550.77}, {'connected_gene': 'ENSG00000202523', 'score': 550.77}, {'connected_gene': 'KIF27', 'score': 10.79}, {'connected_gene': 'LOC105376116', 'score': 10.08}, {'connected_gene': 'RMI1', 'score': 0.39}]