PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000285419	[[92006023, 92008048], [92008881, 92008972], [92020970, 92021023], [92030617, 92030741], [92032384, 92032491], [92033483, 92033632], [92052871, 92053292]]	[[92007904, 92008048], [92008881, 92008972], [92020970, 92021023], [92030617, 92030741], [92032384, 92032491], [92033483, 92033632], [92052871, 92052977]]
ENST00000520709	[[92007751, 92008048], [92008881, 92008972], [92020970, 92021023], [92052871, 92053079]]	[[92008957, 92008972], [92020970, 92021023], [92052871, 92052977]]
ENST00000518359	[[92007820, 92008048], [92008881, 92008972], [92030617, 92030741], [92032384, 92032491], [92033483, 92033632], [92052871, 92053039]]	[[92008957, 92008972], [92030617, 92030741], [92032384, 92032491], [92033483, 92033632], [92052871, 92052977]]
ENST00000520014	[[92007944, 92008048], [92008881, 92008972], [92020970, 92021023], [92030617, 92030741], [92032384, 92032491], [92033483, 92033650], [92052871, 92053063]]	[[92007944, 92008048], [92008881, 92008972], [92020970, 92021023], [92030617, 92030741], [92032384, 92032491], [92033483, 92033650], [92052871, 92052977]]
ENST00000518869	[[92008038, 92008048], [92008881, 92008972], [92020970, 92021023], [92030617, 92030741], [92032384, 92032491], [92033483, 92033632], [92036516, 92036594], [92052871, 92053100]]	[[92036529, 92036594], [92052871, 92052977]]

Promoter

Chrom	Start	End	Description
chr8	92052987	92052996	CAGE_peak_5_at_TMEM55A_5end
chr8	92053029	92053040	CAGE_peak_4_at_TMEM55A_5end
chr8	92053042	92053126	CAGE_peak_1_at_TMEM55A_5end
chr8	92053191	92053206	CAGE_peak_3_at_TMEM55A_5end
chr8	92053212	92053231	CAGE_peak_2_at_TMEM55A_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I091038	91037994	91042295	2	[{'connected_gene': 'PIP4P2', 'score': 550.77}, {'connected_gene': 'OTUD6B-AS1', 'score': 12.18}, {'connected_gene': 'SLC26A7', 'score': 7.8}, {'connected_gene': 'LRRC69', 'score': 7.54}, {'connected_gene': 'LOC105375634', 'score': 4.96}, {'connected_gene': 'ENSG00000253358', 'score': 0.34}]
chr8	GH08I091027	91027293	91027422	0.38	[{'connected_gene': 'PIP4P2', 'score': 0.39}, {'connected_gene': 'ENSG00000253358', 'score': 0.39}]
chr8	GH08I091033	91033681	91033699	0.22	[{'connected_gene': 'PIP4P2', 'score': 4.57}, {'connected_gene': 'ENSG00000253358', 'score': 0.37}]
chr8	GH08I091039	91033401	91033600	0.2	[{'connected_gene': 'SLC26A7', 'score': 7.79}, {'connected_gene': 'PIP4P2', 'score': 0.44}, {'connected_gene': 'ENSG00000253358', 'score': 0.37}]
chr8	GH08I091037	91037493	91037622	0.38	[{'connected_gene': 'SLC26A7', 'score': 7.79}, {'connected_gene': 'PIP4P2', 'score': 0.77}, {'connected_gene': 'ENSG00000253358', 'score': 0.34}]
chr8	GH08I091036	91036293	91036964	0.31	[{'connected_gene': 'OTUD6B-AS1', 'score': 4.21}, {'connected_gene': 'PIP4P2', 'score': 0.77}, {'connected_gene': 'ENSG00000253358', 'score': 0.34}]
chr8	GH08I091032	91032001	91032800	0.83	[{'connected_gene': 'OTUD6B-AS1', 'score': 6.58}, {'connected_gene': 'PIP4P2', 'score': 0.44}, {'connected_gene': 'ENSG00000253358', 'score': 0.37}]
chr8	GH08I091034	91033801	91034872	0.51	[{'connected_gene': 'OTUD6B-AS1', 'score': 12.17}, {'connected_gene': 'LRRC69', 'score': 5.55}, {'connected_gene': 'PIP4P2', 'score': 0.44}, {'connected_gene': 'ENSG00000253358', 'score': 0.37}]
chr8	GH08I091035	91035601	91036000	0.2	[{'connected_gene': 'LRRC69', 'score': 4.97}, {'connected_gene': 'PIP4P2', 'score': 0.44}, {'connected_gene': 'ENSG00000253358', 'score': 0.37}]