Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000428897 [[15074225, 15074349], [15089124, 15089319], [15091633, 15091764], [15103722, 15103861], [15106401, 15106501], [15107582, 15107610]] [[15089287, 15089319], [15091633, 15091764], [15103722, 15103861], [15106401, 15106501], [15107582, 15107610]]
ENST00000413672 [[15074251, 15074349], [15089124, 15089319], [15091633, 15091764], [15098822, 15098949]] [[15089287, 15089319], [15091633, 15091764], [15098822, 15098949]]
ENST00000429028 [[15080620, 15080682], [15089124, 15089319], [15091633, 15091764], [15103722, 15103861], [15106401, 15106501], [15107582, 15107723]] [[15089287, 15089319], [15091633, 15091764], [15103722, 15103861], [15106401, 15106501], [15107582, 15107723]]
ENST00000378228 [[15085894, 15085985], [15089124, 15089319], [15091633, 15091764], [15103722, 15103861], [15106401, 15106501], [15107582, 15107752], [15113793, 15113876], [15115085, 15115851]] [[15089287, 15089319], [15091633, 15091764], [15103722, 15103861], [15106401, 15106501], [15107582, 15107752], [15113793, 15113876], [15115085, 15115228]]
ENST00000378225 [[15085925, 15085985], [15089124, 15089382], [15091633, 15091764], [15103722, 15104083]] [[15089287, 15089382], [15091633, 15091764], [15103722, 15103910]]
ENST00000378217 [[15085961, 15085985], [15089124, 15089319], [15091633, 15091764], [15098822, 15098981], [15103722, 15103861], [15106401, 15106501], [15107582, 15107752], [15113793, 15113876], [15115085, 15115851]] [[15089287, 15089319], [15091633, 15091764], [15098822, 15098981], [15103722, 15103861], [15106401, 15106501], [15107582, 15107752], [15113793, 15113876], [15115085, 15115228]]
ENST00000493912 [[15091721, 15091764], [15103722, 15103861], [15106401, 15106501], [15107556, 15107752], [15110056, 15110069]] None
ENST00000485251 [[15107536, 15107752], [15115085, 15115367]] None
NM_001039702 [[15085894, 15085985], [15089124, 15089319], [15091633, 15091764], [15103722, 15103861], [15106401, 15106501], [15107582, 15107752], [15113793, 15113876], [15115085, 15115851]] [[15089287, 15089319], [15091633, 15091764], [15103722, 15103861], [15106401, 15106501], [15107582, 15107752], [15113793, 15113876], [15115085, 15115228]]
NM_018324 [[15085894, 15085985], [15089124, 15089319], [15091633, 15091764], [15098822, 15098981], [15103722, 15103861], [15106401, 15106501], [15107582, 15107752], [15113793, 15113876], [15115085, 15115851]] [[15089287, 15089319], [15091633, 15091764], [15098822, 15098981], [15103722, 15103861], [15106401, 15106501], [15107582, 15107752], [15113793, 15113876], [15115085, 15115228]]
Promoter
Chrom Start End Description
chr10 15074190 15074195 CAGE_peak_6_at_OLAH_5end
chr10 15085895 15085914 CAGE_peak_3_at_OLAH_5end
chr10 15085918 15085932 CAGE_peak_2_at_OLAH_5end
chr10 15085936 15085963 CAGE_peak_1_at_OLAH_5end
chr10 15089024 15089045 CAGE_peak_4_at_OLAH_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr10 GH10I015043 15043901 15043960 0.82 [{'connected_gene': 'OLAH', 'score': 550.39}, {'connected_gene': 'DCLRE1CP1', 'score': 11.05}, {'connected_gene': 'ACBD7', 'score': 11.0}, {'connected_gene': 'GAPDHP45', 'score': 10.98}, {'connected_gene': 'RPP38', 'score': 10.75}, {'connected_gene': 'C10orf111', 'score': 10.75}]
chr10 GH10I015068 15068580 15069453 0.49 [{'connected_gene': 'OR7E26P', 'score': 4.63}, {'connected_gene': 'DCLRE1CP1', 'score': 0.77}, {'connected_gene': 'OLAH', 'score': 0.28}]
chr10 GH10I015151 15151384 15153511 0.83 [{'connected_gene': 'RPP38', 'score': 15.59}, {'connected_gene': 'C10orf111', 'score': 11.02}, {'connected_gene': 'GAPDHP45', 'score': 11.02}, {'connected_gene': 'OLAH', 'score': 10.49}, {'connected_gene': 'CDNF', 'score': 8.93}, {'connected_gene': 'HSPA14', 'score': 8.93}, {'connected_gene': 'ACBD7', 'score': 6.89}, {'connected_gene': 'PPIAP30', 'score': 0.77}, {'connected_gene': 'NMT2', 'score': 0.37}, {'connected_gene': 'GC10P015124', 'score': 0.31}]
chr10 GH10I015207 15207560 15209437 1.04 [{'connected_gene': 'LOC105376433', 'score': 550.77}, {'connected_gene': 'MEIG1', 'score': 12.5}, {'connected_gene': 'NMT2', 'score': 6.01}, {'connected_gene': 'CDNF', 'score': 1.26}, {'connected_gene': 'OLAH', 'score': 1.24}, {'connected_gene': 'C10orf111', 'score': 1.23}, {'connected_gene': 'LOC105376434', 'score': 0.77}]
chr10 GH10I015035 15035001 15036631 0.93 [{'connected_gene': 'DCLRE1CP1', 'score': 4.78}, {'connected_gene': 'OLAH', 'score': 0.77}]
chr10 GH10I015046 15046822 15046971 0.2 [{'connected_gene': 'DCLRE1CP1', 'score': 11.24}, {'connected_gene': 'ACBD7', 'score': 11.19}, {'connected_gene': 'GAPDHP45', 'score': 11.17}, {'connected_gene': 'OLAH', 'score': 0.39}]
chr10 GH10I015106 15106393 15107058 0.7 [{'connected_gene': 'GC10P015108', 'score': 550.77}, {'connected_gene': 'OLAH', 'score': 10.48}, {'connected_gene': 'C10orf111', 'score': 8.03}, {'connected_gene': 'RPP38', 'score': 6.68}, {'connected_gene': 'ACBD7', 'score': 6.23}, {'connected_gene': 'LOC105376431', 'score': 0.77}, {'connected_gene': 'NMT2', 'score': 0.21}]
chr10 GH10I015013 15013662 15013811 0.54 [{'connected_gene': 'GC10P015013', 'score': 550.77}, {'connected_gene': 'OLAH', 'score': 4.83}]
chr10 GH10I015122 15122923 15124651 0.97 [{'connected_gene': 'GC10P015124', 'score': 550.77}, {'connected_gene': 'ACBD7', 'score': 19.08}, {'connected_gene': 'C10orf111', 'score': 16.87}, {'connected_gene': 'RPP38', 'score': 11.7}, {'connected_gene': 'GAPDHP45', 'score': 11.68}, {'connected_gene': 'DCLRE1CP1', 'score': 11.2}, {'connected_gene': 'OLAH', 'score': 10.53}, {'connected_gene': 'GC10P015108', 'score': 0.37}, {'connected_gene': 'LOC105376431', 'score': 0.37}, {'connected_gene': 'NMT2', 'score': 0.26}]

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