PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000533473	[[73110809, 73112488]]	[[73111232, 73112051]]
NM_018029	[[73110809, 73112488]]	[[73111232, 73112051]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I072886	72886451	72893369	2.42	[{'connected_gene': 'GXYLT2', 'score': 559.38}, {'connected_gene': 'SHQ1', 'score': 12.02}, {'connected_gene': 'RYBP', 'score': 1.94}, {'connected_gene': 'EBLN2', 'score': 1.48}, {'connected_gene': 'LAPTM4BP2', 'score': 0.44}, {'connected_gene': 'ENSG00000276890', 'score': 0.28}]
chr3	GH03I072273	72273169	72275856	1.42	[{'connected_gene': 'SHQ1', 'score': 12.37}, {'connected_gene': 'RYBP', 'score': 10.82}, {'connected_gene': 'EBLN2', 'score': 10.2}, {'connected_gene': 'LINC00877', 'score': 0.77}, {'connected_gene': 'LOC105377158', 'score': 0.29}, {'connected_gene': 'ENSG00000242618', 'score': 0.21}]
chr3	GH03I073061	73060550	73060719	0.31	[{'connected_gene': 'EBLN2', 'score': 550.77}, {'connected_gene': 'SHQ1', 'score': 11.28}, {'connected_gene': 'GC03P073027', 'score': 0.29}, {'connected_gene': 'PPP4R2', 'score': 0.21}]
chr3	GH03I073060	73060950	73061891	0.7	[{'connected_gene': 'EBLN2', 'score': 550.77}, {'connected_gene': 'SHQ1', 'score': 11.28}, {'connected_gene': 'GC03P073027', 'score': 0.29}, {'connected_gene': 'PPP4R2', 'score': 0.21}]
chr3	GH03I072875	72875983	72876166	0.49	[{'connected_gene': 'EBLN2', 'score': 1.4}, {'connected_gene': 'PSMD12P', 'score': 0.77}, {'connected_gene': 'SHQ1', 'score': 0.39}, {'connected_gene': 'GXYLT2', 'score': 0.31}]
chr3	GH03I072278	72278248	72280362	0.7	[{'connected_gene': 'LINC00877', 'score': 550.77}, {'connected_gene': 'EBLN2', 'score': 12.18}, {'connected_gene': 'RYBP', 'score': 10.83}, {'connected_gene': 'SHQ1', 'score': 10.82}, {'connected_gene': 'LOC105377158', 'score': 0.31}, {'connected_gene': 'ENSG00000242618', 'score': 0.2}]
chr3	GH03I072972	72972078	72973970	1.27	[{'connected_gene': 'PPP4R2', 'score': 24.46}, {'connected_gene': 'GXYLT2', 'score': 23.16}, {'connected_gene': 'EBLN2', 'score': 2.34}, {'connected_gene': 'GC03M072929', 'score': 0.26}]
chr3	GH03I073055	73055801	73056639	0.76	[{'connected_gene': 'PPP4R2', 'score': 30.63}, {'connected_gene': 'SHQ1', 'score': 11.63}, {'connected_gene': 'RNU2-64P', 'score': 10.63}, {'connected_gene': 'EBLN2', 'score': 0.44}, {'connected_gene': 'GC03P073027', 'score': 0.31}]
chr3	GH03I073000	73000018	73000182	0.5	[{'connected_gene': 'PPP4R2', 'score': 13.02}, {'connected_gene': 'EBLN2', 'score': 2.48}, {'connected_gene': 'RNU7-19P', 'score': 0.31}]
chr3	GH03I073037	73037374	73038667	1.04	[{'connected_gene': 'PPP4R2', 'score': 27.76}, {'connected_gene': 'GC03P073027', 'score': 0.39}, {'connected_gene': 'EBLN2', 'score': 0.34}]
chr3	GH03I073032	73032401	73032600	0.2	[{'connected_gene': 'PPP4R2', 'score': 11.45}, {'connected_gene': 'GC03P073027', 'score': 0.77}, {'connected_gene': 'EBLN2', 'score': 0.31}]
chr3	GH03I073038	73037130	73037279	0.69	[{'connected_gene': 'PPP4R2', 'score': 11.38}, {'connected_gene': 'GC03P073027', 'score': 0.44}, {'connected_gene': 'EBLN2', 'score': 0.34}]
chr3	GH03I073035	73035201	73035600	0.2	[{'connected_gene': 'PPP4R2', 'score': 11.92}, {'connected_gene': 'GC03P073027', 'score': 0.44}, {'connected_gene': 'EBLN2', 'score': 0.31}]
chr3	GH03I073110	73110070	73111157	0.72	[{'connected_gene': 'RNU2-64P', 'score': 550.77}, {'connected_gene': 'EBLN2', 'score': 1.61}, {'connected_gene': 'RNU6-557P', 'score': 0.37}]
chr3	GH03I073028	73028615	73030620	1.09	[{'connected_gene': 'RNU7-19P', 'score': 550.77}, {'connected_gene': 'GC03P073027', 'score': 550.77}, {'connected_gene': 'PPP4R2', 'score': 29.11}, {'connected_gene': 'EBLN2', 'score': 0.29}]
chr3	GH03I072738	72738201	72740796	1.05	[{'connected_gene': 'GC03P072740', 'score': 550.77}, {'connected_gene': 'SHQ1', 'score': 16.23}, {'connected_gene': 'EBLN2', 'score': 10.23}, {'connected_gene': 'RYBP', 'score': 10.18}, {'connected_gene': 'RNA5SP136', 'score': 0.25}]