PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000407071	[[245318286, 245318789], [245319583, 245319985], [245530135, 245530669], [245582880, 245583047], [245704068, 245704252], [245765878, 245766085], [245770952, 245771046], [245772567, 245772830], [245775094, 245775278], [245809422, 245809582], [245847534, 245847697], [245848706, 245852109], [245861407, 245861610], [245862188, 245862339], [245865759, 245866428]]	[[245318726, 245318789], [245319583, 245319985], [245530135, 245530669], [245582880, 245583047], [245704068, 245704252], [245765878, 245766085], [245770952, 245771046], [245772567, 245772830], [245775094, 245775278], [245809422, 245809582], [245847534, 245847697], [245848706, 245852109], [245861407, 245861610], [245862188, 245862339], [245865759, 245865908]]
ENST00000366518	[[245674303, 245674430], [245704068, 245704252], [245765878, 245766085], [245770952, 245771046], [245772567, 245772830], [245775094, 245775278], [245809422, 245809582], [245847534, 245847697], [245848706, 245852109], [245861407, 245861610], [245862188, 245862339], [245865759, 245872733]]	[[245674407, 245674430], [245704068, 245704252], [245765878, 245766085], [245770952, 245771046], [245772567, 245772830], [245775094, 245775278], [245809422, 245809582], [245847534, 245847697], [245848706, 245852109], [245861407, 245861610], [245862188, 245862339], [245865759, 245865908]]
ENST00000479506	[[245516979, 245517218], [245530135, 245530669], [245533877, 245533996], [245534722, 245535019]]	None
ENST00000483253	[[245809393, 245809582], [245847534, 245847697], [245848706, 245850616]]	None
NM_018012	[[245318286, 245318789], [245319583, 245319985], [245530135, 245530669], [245582880, 245583047], [245704068, 245704252], [245765878, 245766085], [245770952, 245771046], [245772567, 245772830], [245775094, 245775278], [245809422, 245809582], [245847534, 245847697], [245848706, 245852109], [245861407, 245861610], [245862188, 245862339], [245865759, 245866428]]	[[245318726, 245318789], [245319583, 245319985], [245530135, 245530669], [245582880, 245583047], [245704068, 245704252], [245765878, 245766085], [245770952, 245771046], [245772567, 245772830], [245775094, 245775278], [245809422, 245809582], [245847534, 245847697], [245848706, 245852109], [245861407, 245861610], [245862188, 245862339], [245865759, 245865908]]

Promoter

Chrom	Start	End	Description
chr1	245317998	245318028	CAGE_peak_7_at_KIF26B_5end
chr1	245318070	245318083	CAGE_peak_9_at_KIF26B_5end
chr1	245318279	245318297	CAGE_peak_1_at_KIF26B_5end
chr1	245318423	245318444	CAGE_peak_5_at_KIF26B_5end
chr1	245674002	245674013	CAGE_peak_16_at_KIF26B_5end
chr1	245674016	245674045	CAGE_peak_3_at_KIF26B_5end
chr1	245809322	245809343	CAGE_peak_8_at_KIF26B_5end
chr1	245809377	245809410	CAGE_peak_2_at_KIF26B_5end
chr1	245809411	245809422	CAGE_peak_15_at_KIF26B_5end
chr1	245809424	245809436	CAGE_peak_13_at_KIF26B_5end
chr1	245809446	245809460	CAGE_peak_10_at_KIF26B_5end
chr1	245809477	245809487	CAGE_peak_18_at_KIF26B_5end
chr1	245809502	245809517	CAGE_peak_11_at_KIF26B_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I245873	245873891	245876216	1.5	[{'connected_gene': 'KIF26B', 'score': 10.7}, {'connected_gene': 'ENSG00000231612', 'score': 10.18}, {'connected_gene': 'ENSG00000235096', 'score': 10.14}, {'connected_gene': 'PIR42564', 'score': 0.39}, {'connected_gene': 'GC01P245894', 'score': 0.37}, {'connected_gene': 'SMYD3', 'score': 0.03}]
chr1	GH01I245880	245880437	245882255	0.66	[{'connected_gene': 'KIF26B', 'score': 10.7}, {'connected_gene': 'ENSG00000231612', 'score': 10.18}, {'connected_gene': 'ENSG00000235096', 'score': 10.15}, {'connected_gene': 'GC01P245894', 'score': 0.39}, {'connected_gene': 'PIR42564', 'score': 0.37}, {'connected_gene': 'SMYD3', 'score': 0.03}]
chr1	GH01I245090	245090775	245093229	1.35	[{'connected_gene': 'KIF26B', 'score': 10.86}, {'connected_gene': 'KIF26B-AS1', 'score': 9.84}, {'connected_gene': 'EFCAB2', 'score': 7.86}, {'connected_gene': 'LOC101928068', 'score': 7.39}, {'connected_gene': 'PIR32194', 'score': 0.44}, {'connected_gene': 'RNU6-999P', 'score': 0.25}]
chr1	GH01I245377	245377767	245379129	0.6	[{'connected_gene': 'KIF26B', 'score': 11.17}, {'connected_gene': 'KIF26B-AS1', 'score': 10.34}, {'connected_gene': 'PIR44116', 'score': 0.21}, {'connected_gene': 'LOC105373266', 'score': 0.19}]
chr1	GH01I245375	245375472	245376710	0.31	[{'connected_gene': 'KIF26B', 'score': 10.61}, {'connected_gene': 'KIF26B-AS1', 'score': 9.94}, {'connected_gene': 'PIR44116', 'score': 0.21}, {'connected_gene': 'LOC105373266', 'score': 0.19}]
chr1	GH01I245178	245177419	245177568	0.43	[{'connected_gene': 'KIF26B', 'score': 11.93}, {'connected_gene': 'KIF26B-AS1', 'score': 11.56}]
chr1	GH01I245153	245153895	245157201	1.86	[{'connected_gene': 'KIF26B', 'score': 550.77}, {'connected_gene': 'KIF26B-AS1', 'score': 0.18}]
chr1	GH01I245157	245157239	245157307	0.57	[{'connected_gene': 'KIF26B', 'score': 0.77}, {'connected_gene': 'KIF26B-AS1', 'score': 0.18}]
chr1	GH01I245180	245180639	245180788	0.2	[{'connected_gene': 'KIF26B', 'score': 11.91}, {'connected_gene': 'KIF26B-AS1', 'score': 11.57}]
chr1	GH01I245177	245177159	245177308	0.52	[{'connected_gene': 'KIF26B', 'score': 11.93}, {'connected_gene': 'KIF26B-AS1', 'score': 11.56}]
chr1	GH01I245188	245188318	245189000	0.31	[{'connected_gene': 'KIF26B', 'score': 11.82}, {'connected_gene': 'KIF26B-AS1', 'score': 11.68}]
chr1	GH01I245154	245153119	245153528	1.24	[{'connected_gene': 'KIF26B', 'score': 550.77}, {'connected_gene': 'GC01M245135', 'score': 0.37}, {'connected_gene': 'RNU1-132P', 'score': 0.37}]
chr1	GH01I245310	245310535	245311614	0.79	[{'connected_gene': 'KIF26B', 'score': 6.64}, {'connected_gene': 'PIR44116', 'score': 0.77}, {'connected_gene': 'DNAJC19P8', 'score': 0.31}]
chr1	GH01I245298	245298694	245299288	0.2	[{'connected_gene': 'KIF26B', 'score': 15.53}, {'connected_gene': 'PIR44116', 'score': 0.37}, {'connected_gene': 'DNAJC19P8', 'score': 0.37}]
chr1	GH01I245337	245337316	245338803	0.92	[{'connected_gene': 'HNRNPU', 'score': 36.44}, {'connected_gene': 'DESI2', 'score': 18.83}, {'connected_gene': 'LOC101928068', 'score': 13.67}, {'connected_gene': 'KIF26B', 'score': 10.86}, {'connected_gene': 'KIF26B-AS1', 'score': 10.63}, {'connected_gene': 'ADSS', 'score': 9.8}, {'connected_gene': 'PIR44116', 'score': 0.34}, {'connected_gene': 'LOC105373266', 'score': 0.14}]
chr1	GH01I245336	245336144	245337228	0.66	[{'connected_gene': 'HNRNPU', 'score': 27.63}, {'connected_gene': 'LOC101928068', 'score': 13.67}, {'connected_gene': 'COX20', 'score': 11.71}, {'connected_gene': 'KIF26B-AS1', 'score': 10.45}, {'connected_gene': 'DESI2', 'score': 10.15}, {'connected_gene': 'PIR44116', 'score': 0.34}, {'connected_gene': 'LOC105373266', 'score': 0.14}, {'connected_gene': 'KIF26B', 'score': 0.09}]
chr1	GH01I245345	245345318	245346188	0.84	[{'connected_gene': 'ADSS', 'score': 20.41}, {'connected_gene': 'HNRNPU', 'score': 9.89}, {'connected_gene': 'PIR44116', 'score': 0.29}, {'connected_gene': 'LOC105373266', 'score': 0.15}, {'connected_gene': 'KIF26B', 'score': 0.08}]
chr1	GH01I245400	245400493	245400508	0.22	[{'connected_gene': 'KIF26B-AS1', 'score': 10.22}, {'connected_gene': 'KIF26B', 'score': 1.62}, {'connected_gene': 'LOC105373266', 'score': 0.23}, {'connected_gene': 'PIR44116', 'score': 0.17}]
chr1	GH01I245300	245300944	245301845	0.43	[{'connected_gene': 'KIF26B-AS1', 'score': 11.14}, {'connected_gene': 'KIF26B', 'score': 10.51}, {'connected_gene': 'PIR44116', 'score': 0.39}, {'connected_gene': 'DNAJC19P8', 'score': 0.37}]
chr1	GH01I245256	245256293	245257248	0.43	[{'connected_gene': 'KIF26B-AS1', 'score': 12.59}, {'connected_gene': 'KIF26B', 'score': 5.59}, {'connected_gene': 'GC01M245282', 'score': 0.31}]
chr1	GH01I245258	245258076	245259207	0.8	[{'connected_gene': 'KIF26B-AS1', 'score': 11.99}, {'connected_gene': 'KIF26B', 'score': 11.06}, {'connected_gene': 'GC01M245282', 'score': 0.34}]
chr1	GH01I245168	245168001	245168400	0.46	[{'connected_gene': 'KIF26B-AS1', 'score': 11.19}, {'connected_gene': 'KIF26B', 'score': 0.39}]
chr1	GH01I245236	245235775	245235884	0.22	[{'connected_gene': 'KIF26B-AS1', 'score': 550.77}, {'connected_gene': 'KIF26B', 'score': 1.96}, {'connected_gene': 'GC01M245282', 'score': 0.25}]
chr1	GH01I245166	245166201	245166800	0.43	[{'connected_gene': 'KIF26B-AS1', 'score': 10.56}, {'connected_gene': 'KIF26B', 'score': 0.39}]
chr1	GH01I245257	245257676	245257684	0.2	[{'connected_gene': 'KIF26B-AS1', 'score': 11.7}, {'connected_gene': 'GC01M245282', 'score': 0.31}, {'connected_gene': 'KIF26B', 'score': 0.15}]
chr1	GH01I245235	245235199	245235348	0.2	[{'connected_gene': 'KIF26B-AS1', 'score': 550.77}, {'connected_gene': 'GC01M245282', 'score': 0.25}, {'connected_gene': 'KIF26B', 'score': 0.18}]
chr1	GH01I245245	245245379	245245508	0.49	[{'connected_gene': 'KIF26B-AS1', 'score': 0.39}, {'connected_gene': 'GC01M245282', 'score': 0.28}, {'connected_gene': 'KIF26B', 'score': 0.16}]
chr1	GH01I245234	245234300	245235184	0.46	[{'connected_gene': 'KIF26B-AS1', 'score': 550.77}, {'connected_gene': 'GC01M245282', 'score': 0.25}, {'connected_gene': 'KIF26B', 'score': 0.18}]
chr1	GH01I245409	245409515	245410602	0.2	[{'connected_gene': 'KIF26B-AS1', 'score': 10.15}, {'connected_gene': 'LOC105373266', 'score': 0.26}, {'connected_gene': 'PIR44116', 'score': 0.15}, {'connected_gene': 'KIF26B', 'score': 0.07}]
chr1	GH01I245450	245450542	245450949	0.22	[{'connected_gene': 'LOC105373266', 'score': 550.77}, {'connected_gene': 'KIF26B-AS1', 'score': 10.38}, {'connected_gene': 'PIR60478', 'score': 0.39}, {'connected_gene': 'KIF26B', 'score': 0.06}]
chr1	GH01I246007	246007964	246009297	0.4	[{'connected_gene': 'LOC101928089', 'score': 15.29}, {'connected_gene': 'KIF26B', 'score': 10.52}, {'connected_gene': 'ENSG00000235096', 'score': 0.37}, {'connected_gene': 'LOC105373269', 'score': 0.14}, {'connected_gene': 'SMYD3', 'score': 0.04}]
chr1	GH01I245968	245968359	245970178	0.69	[{'connected_gene': 'ENSG00000235096', 'score': 10.64}, {'connected_gene': 'ENSG00000231612', 'score': 10.14}, {'connected_gene': 'KIF26B', 'score': 10.07}, {'connected_gene': 'LOC105373269', 'score': 0.19}, {'connected_gene': 'SMYD3', 'score': 0.03}]
chr1	GH01I245587	245587812	245588230	0.22	[{'connected_gene': 'ENSG00000231612', 'score': 11.08}, {'connected_gene': 'KIF26B', 'score': 1.38}, {'connected_gene': 'ENSG00000238224', 'score': 0.31}, {'connected_gene': 'PIR31070', 'score': 0.15}]
chr1	GH01I245512	245512401	245513400	0.66	[{'connected_gene': 'PIR31070', 'score': 0.34}, {'connected_gene': 'ENSG00000238224', 'score': 0.15}, {'connected_gene': 'KIF26B', 'score': 0.05}]
chr1	GH01I245604	245604902	245606804	0.74	[{'connected_gene': 'ENSG00000238224', 'score': 0.44}, {'connected_gene': 'PIR31070', 'score': 0.13}, {'connected_gene': 'KIF26B', 'score': 0.05}]
chr1	GH01I245485	245485801	245486400	0.46	[{'connected_gene': 'PIR31070', 'score': 0.77}, {'connected_gene': 'PIR60478', 'score': 0.34}, {'connected_gene': 'KIF26B', 'score': 0.06}]
chr1	GH01I245646	245646159	245646308	0.71	[{'connected_gene': 'ENSG00000231612', 'score': 11.29}, {'connected_gene': 'ENSG00000238224', 'score': 0.29}, {'connected_gene': 'KIF26B', 'score': 0.04}]
chr1	GH01I245654	245654401	245655367	0.2	[{'connected_gene': 'ENSG00000231612', 'score': 12.46}, {'connected_gene': 'ENSG00000238224', 'score': 0.28}, {'connected_gene': 'KIF26B', 'score': 0.04}]
chr1	GH01I245598	245598244	245600116	0.77	[{'connected_gene': 'ENSG00000238224', 'score': 0.37}, {'connected_gene': 'PIR31070', 'score': 0.14}, {'connected_gene': 'KIF26B', 'score': 0.04}]
chr1	GH01I245510	245510801	245511200	0.2	[{'connected_gene': 'PIR31070', 'score': 0.34}, {'connected_gene': 'ENSG00000238224', 'score': 0.15}, {'connected_gene': 'KIF26B', 'score': 0.05}]
chr1	GH01I245550	245550401	245550600	0.31	[{'connected_gene': 'PIR31070', 'score': 0.21}, {'connected_gene': 'ENSG00000238224', 'score': 0.21}, {'connected_gene': 'KIF26B', 'score': 0.05}]
chr1	GH01I245584	245584944	245586005	0.74	[{'connected_gene': 'ENSG00000238224', 'score': 12.81}, {'connected_gene': 'ENSG00000231612', 'score': 10.22}, {'connected_gene': 'KIF26B-AS1', 'score': 10.02}, {'connected_gene': 'PIR31070', 'score': 0.15}, {'connected_gene': 'KIF26B', 'score': 0.04}]
chr1	GH01I245363	245363827	245364409	0.43	[{'connected_gene': 'PIR44116', 'score': 0.25}, {'connected_gene': 'LOC105373266', 'score': 0.17}, {'connected_gene': 'KIF26B', 'score': 0.08}]
chr1	GH01I245458	245458999	245459148	0.38	[{'connected_gene': 'PIR60478', 'score': 0.44}, {'connected_gene': 'LOC105373266', 'score': 0.44}, {'connected_gene': 'KIF26B', 'score': 0.06}]
chr1	GH01I245684	245683279	245683428	0.31	[{'connected_gene': 'ENSG00000231612', 'score': 0.44}, {'connected_gene': 'LOC105373265', 'score': 0.37}, {'connected_gene': 'KIF26B', 'score': 0.03}]
chr1	GH01I245677	245677098	245677227	0.24	[{'connected_gene': 'ENSG00000231612', 'score': 550.77}, {'connected_gene': 'LOC105373265', 'score': 0.34}, {'connected_gene': 'KIF26B', 'score': 0.03}]
chr1	GH01I245683	245683455	245684006	0.2	[{'connected_gene': 'ENSG00000231612', 'score': 0.44}, {'connected_gene': 'LOC105373265', 'score': 0.37}, {'connected_gene': 'KIF26B', 'score': 0.03}]